AT1G60140 : trehalose phosphate synthase
Query Information
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AGICode AT1G60140
Description trehalose phosphate synthase
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G60140 trehalose phosphate synthase trehalose phosphate synthase,
trehalose phosphate synthase,
TREHALOSE PHOSPHATE SYNTHASE 10		 1 0.31 -0.33
2 AT2G24260 LJRHL1-like 1 LJRHL1-like 1 0.79 0.32 -0.3
3 AT2G23030 SNF1-related protein kinase 2.9 SUCROSE NONFERMENTING 1-RELATED
PROTEIN KINASE 2-9, SNF1-related
protein kinase 2.9		 0.73 0.28 -0.33
4 AT3G16850 Pectin lyase-like superfamily protein -0.71 0.31 -0.31
5 AT2G36080 AP2/B3-like transcriptional factor family protein 0.71 0.31 -0.31
6 AT5G11090 serine-rich protein-related 0.71 0.31 -0.33
7 AT5G13010 RNA helicase family protein embryo defective 3011 0.7 0.31 -0.32
8 AT3G55420 unknown protein; Has 21 Blast hits to 21 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.68 0.31 -0.32
9 AT5G11930 Thioredoxin superfamily protein -0.68 0.3 -0.32
10 AT5G60880 breaking of asymmetry in the stomatal lineage BREAKING OF ASYMMETRY IN THE
STOMATAL LINEAGE		 -0.67 0.3 -0.33
11 AT2G40610 expansin A8 ATEXP8, expansin A8, ATHEXP ALPHA
1.11, EXP8, expansin A8		 -0.67 0.3 -0.31
12 AT4G34860 Plant neutral invertase family protein alkaline/neutral invertase B 0.66 0.33 -0.32
13 AT5G67280 receptor-like kinase receptor-like kinase -0.66 0.3 -0.32
14 AT4G28250 expansin B3 expansin B3, ATHEXP BETA 1.6,
expansin B3		 -0.66 0.3 -0.31
15 AT3G01860 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to cadmium ion; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G27210.1); Has 66 Blast
hits to 66 proteins in 13 species: Archae - 0; Bacteria -
0; Metazoa - 5; Fungi - 0; Plants - 61; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.66 0.33 -0.29
16 AT1G23120 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 0.65 0.31 -0.3
17 AT2G28910 CAX interacting protein 4 CAX interacting protein 4 0.65 0.29 -0.31
18 AT4G25760 glutamine dumper 2 glutamine dumper 2, glutamine
dumper 2		 -0.65 0.33 -0.31
19 AT3G24140 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 FAMA -0.65 0.31 -0.31
20 AT1G61820 beta glucosidase 46 beta glucosidase 46 0.65 0.34 -0.3
21 AT5G14970 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G14910.1); Has 579 Blast hits
to 397 proteins in 95 species: Archae - 0; Bacteria - 294;
Metazoa - 0; Fungi - 0; Plants - 86; Viruses - 0; Other
Eukaryotes - 199 (source: NCBI BLink).		 -0.65 0.32 -0.31
22 AT3G17120 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G02380.1); Has 67 Blast hits
to 67 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.65 0.32 -0.33
23 AT1G33050 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 25 plant
structures; EXPRESSED DURING: 15 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G10470.1); Has 531 Blast hits to 229 proteins in
83 species: Archae - 0; Bacteria - 197; Metazoa - 59; Fungi
- 50; Plants - 48; Viruses - 0; Other Eukaryotes - 177
(source: NCBI BLink).		 0.65 0.33 -0.3
24 AT4G35770 Rhodanese/Cell cycle control phosphatase superfamily
protein		 ARABIDOPSIS THALIANA SENESCENCE 1,
DARK INDUCIBLE 1, SENESCENCE 1,
SENESCENCE ASSOCIATED GENE 1		 0.64 0.32 -0.3
25 AT2G22680 Zinc finger (C3HC4-type RING finger) family protein WAV3 homolog 1 0.64 0.33 -0.33
26 AT3G50890 homeobox protein 28 homeobox protein 28, homeobox
protein 28, ZINC FINGER
HOMEODOMAIN 7		 -0.64 0.33 -0.3
27 AT4G24010 cellulose synthase like G1 ARABIDOPSIS THALIANA CELLULOSE
SYNTHASE LIKE G1, cellulose
synthase like G1		 -0.64 0.32 -0.33
28 AT3G60300 RWD domain-containing protein 0.64 0.32 -0.32
29 AT4G27260 Auxin-responsive GH3 family protein GH3.5, WES1 0.64 0.3 -0.34
30 AT2G22660 Protein of unknown function (duplicated DUF1399) 0.64 0.32 -0.31
31 AT3G52550 BEST Arabidopsis thaliana protein match is: ovate family
protein 18 (TAIR:AT3G52540.1); Has 5496 Blast hits to 1338
proteins in 151 species: Archae - 0; Bacteria - 23; Metazoa
- 3754; Fungi - 379; Plants - 301; Viruses - 154; Other
Eukaryotes - 885 (source: NCBI BLink).		 -0.63 0.3 -0.31
32 AT4G12030 bile acid transporter 5 BILE ACID:SODIUM SYMPORTER FAMILY
PROTEIN 5, bile acid transporter 5		 -0.63 0.31 -0.3
33 AT3G01550 phosphoenolpyruvate (pep)/phosphate translocator 2 PHOSPHOENOLPYRUVATE
(PEP)/PHOSPHATE TRANSLOCATOR 2,
phosphoenolpyruvate
(pep)/phosphate translocator 2		 -0.63 0.31 -0.33
34 AT1G62960 ACC synthase 10 ACC synthase 10 -0.63 0.31 -0.32
35 AT2G18360 alpha/beta-Hydrolases superfamily protein 0.63 0.31 -0.3
36 AT1G03440 Leucine-rich repeat (LRR) family protein -0.63 0.31 -0.33
37 AT4G16140 proline-rich family protein -0.63 0.32 -0.33
38 AT5G63440 Protein of unknown function (DUF167) -0.62 0.32 -0.32
39 AT4G18290 potassium channel in Arabidopsis thaliana 2 potassium channel in Arabidopsis
thaliana 2		 -0.62 0.33 -0.3
40 AT5G19950 Domain of unknown function (DUF1767) 0.62 0.32 -0.31
41 AT3G63010 alpha/beta-Hydrolases superfamily protein ATGID1B, GA INSENSITIVE DWARF1B 0.61 0.31 -0.34
42 AT1G73530 RNA-binding (RRM/RBD/RNP motifs) family protein -0.61 0.32 -0.33
43 AT3G62860 alpha/beta-Hydrolases superfamily protein 0.61 0.31 -0.33
44 AT2G44740 cyclin p4;1 cyclin p4;1 -0.61 0.34 -0.34
45 AT1G32700 PLATZ transcription factor family protein 0.61 0.31 -0.32
46 AT1G25560 AP2/B3 transcription factor family protein ETHYLENE RESPONSE DNA BINDING
FACTOR 1, TEMPRANILLO 1		 0.61 0.32 -0.31
47 AT1G04800 glycine-rich protein -0.61 0.31 -0.32
48 AT1G23870 trehalose-phosphatase/synthase 9 trehalose-phosphatase/synthase 9,
TREHALOSE -6-PHOSPHATASE SYNTHASE
S9, trehalose-phosphatase/synthase
9		 0.61 0.3 -0.3
49 AT5G53280 plastid division1 PLASTID DIVISION1 -0.61 0.3 -0.33
50 AT4G28040 nodulin MtN21 /EamA-like transporter family protein 0.61 0.33 -0.31
51 AT2G37340 arginine/serine-rich zinc knuckle-containing protein 33 arginine/serine-rich zinc
knuckle-containing protein 33,
ARGININE/SERINE-RICH ZINC
KNUCKLE-CONTAINING PROTEIN 33,
arginine/serine-rich zinc
knuckle-containing protein 33,
arginine/serine-rich zinc
knuckle-containing protein 33		 0.61 0.31 -0.32
52 AT1G69970 CLAVATA3/ESR-RELATED 26 CLAVATA3/ESR-RELATED 26 -0.6 0.32 -0.29
53 AT5G67560 ADP-ribosylation factor-like A1D ADP-ribosylation factor-like A1D,
ADP-ribosylation factor-like A1D		 -0.6 0.31 -0.31
54 AT1G28330 dormancy-associated protein-like 1 DORMANCY-ASSOCIATED PROTEIN 1,
dormancy-associated protein-like 1		 0.6 0.31 -0.3
55 AT3G44450 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G52740.1); Has 63 Blast hits
to 63 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.6 0.31 -0.31
56 AT2G45210 SAUR-like auxin-responsive protein family 0.6 0.31 -0.29
57 AT3G19100 Protein kinase superfamily protein 0.6 0.31 -0.33
58 AT5G65660 hydroxyproline-rich glycoprotein family protein 0.6 0.33 -0.33
59 AT1G20160 Subtilisin-like serine endopeptidase family protein ATSBT5.2 0.6 0.32 -0.31
60 AT4G13030 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.6 0.32 -0.34
61 AT1G21065 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Uncharacterised protein family UPF0047
(InterPro:IPR001602); Has 3800 Blast hits to 3784 proteins
in 1137 species: Archae - 215; Bacteria - 2154; Metazoa -
42; Fungi - 99; Plants - 99; Viruses - 0; Other Eukaryotes
- 1191 (source: NCBI BLink).		 -0.6 0.29 -0.3
62 AT5G14390 alpha/beta-Hydrolases superfamily protein 0.59 0.32 -0.32
63 AT3G55940 Phosphoinositide-specific phospholipase C family protein -0.59 0.32 -0.31
64 AT2G44930 Plant protein of unknown function (DUF247) -0.59 0.34 -0.31
65 AT5G57655 xylose isomerase family protein 0.59 0.32 -0.32
66 AT5G37710 alpha/beta-Hydrolases superfamily protein 0.59 0.29 -0.31
67 AT1G04290 Thioesterase superfamily protein -0.59 0.32 -0.34
68 AT3G05120 alpha/beta-Hydrolases superfamily protein GA INSENSITIVE DWARF1A, GA
INSENSITIVE DWARF1A		 0.59 0.32 -0.31
69 AT5G26731 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.59 0.3 -0.31
70 AT5G47560 tonoplast dicarboxylate transporter ATSDAT, TONOPLAST DICARBOXYLATE
TRANSPORTER, tonoplast
dicarboxylate transporter		 0.59 0.32 -0.31
71 AT5G02560 histone H2A 12 histone H2A 12 -0.59 0.33 -0.29
72 AT5G54530 Protein of unknown function, DUF538 -0.59 0.31 -0.31
73 AT1G15330 Cystathionine beta-synthase (CBS) protein 0.59 0.31 -0.32
74 AT5G39590 TLD-domain containing nucleolar protein 0.59 0.3 -0.33
75 AT1G26665 Mediator complex, subunit Med10 0.58 0.31 -0.32
76 AT4G37445 BEST Arabidopsis thaliana protein match is: Calcium-binding
EF hand family protein (TAIR:AT1G64850.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.58 0.3 -0.31
77 ATMG01180 hypothetical protein ORF111B 0.58 0.31 -0.29
78 AT3G20670 histone H2A 13 histone H2A 13 -0.58 0.31 -0.32
79 AT2G37410 translocase inner membrane subunit 17-2 translocase inner membrane subunit
17-2, TRANSLOCASE OF THE INNER
MEMBRANE 17, translocase inner
membrane subunit 17-2		 0.58 0.32 -0.31
80 AT3G53730 Histone superfamily protein -0.58 0.29 -0.31
81 AT5G12470 Protein of unknown function (DUF3411) -0.58 0.34 -0.31
82 AT3G21090 ABC-2 type transporter family protein ATP-binding cassette G15 0.58 0.36 -0.31
83 AT5G49700 Predicted AT-hook DNA-binding family protein 0.58 0.33 -0.33
84 AT2G26830 Protein kinase superfamily protein embryo defective 1187 -0.58 0.29 -0.33
85 AT3G12500 basic chitinase basic chitinase, B-CHI, CHI-B,
basic chitinase,
PATHOGENESIS-RELATED 3,
PATHOGENESIS-RELATED 3		 0.57 0.3 -0.33
86 AT1G74810 HCO3- transporter family BOR5 -0.57 0.31 -0.32
87 AT2G25090 CBL-interacting protein kinase 16 CBL-interacting protein kinase 16,
SNF1-RELATED PROTEIN KINASE 3.18		 0.57 0.32 -0.29
88 AT5G19370 rhodanese-like domain-containing protein / PPIC-type PPIASE
domain-containing protein		 -0.57 0.33 -0.33
89 AT5G03370 acylphosphatase family -0.57 0.31 -0.3
90 AT1G69080 Adenine nucleotide alpha hydrolases-like superfamily
protein		 -0.57 0.29 -0.31
91 AT1G63170 Zinc finger, C3HC4 type (RING finger) family protein -0.57 0.3 -0.33
92 AT3G24000 Tetratricopeptide repeat (TPR)-like superfamily protein 0.57 0.33 -0.33
93 AT5G07710 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 -0.57 0.32 -0.32
94 AT1G77760 nitrate reductase 1 GNR1, nitrate reductase 1, NITRATE
REDUCTASE 1		 0.57 0.31 -0.3
95 AT5G49760 Leucine-rich repeat protein kinase family protein -0.57 0.32 -0.32
96 AT5G42760 Leucine carboxyl methyltransferase -0.57 0.32 -0.32
97 AT3G22231 pathogen and circadian controlled 1 PATHOGEN AND CIRCADIAN CONTROLLED
1		 -0.57 0.3 -0.29
98 AT2G20750 expansin B1 expansin B1, ATHEXP BETA 1.5,
expansin B1		 -0.57 0.31 -0.32
99 AT1G30530 UDP-glucosyl transferase 78D1 UDP-glucosyl transferase 78D1 -0.56 0.32 -0.31
100 AT2G44710 RNA-binding (RRM/RBD/RNP motifs) family protein 0.56 0.3 -0.32
101 AT1G78310 VQ motif-containing protein 0.56 0.34 -0.3
102 AT4G02380 senescence-associated gene 21 Arabidopsis thaliana late
embryogenensis abundant like 5,
senescence-associated gene 21		 0.56 0.34 -0.29
103 AT2G05540 Glycine-rich protein family 0.56 0.31 -0.32
104 AT3G52900 Family of unknown function (DUF662) -0.56 0.33 -0.3
105 AT5G59830 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G13660.2); Has 174 Blast hits
to 139 proteins in 16 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 172; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).		 0.56 0.29 -0.33
106 AT5G54590 Protein kinase superfamily protein calcium/calmodulin-regulated
receptor-like kinase 1		 -0.56 0.33 -0.28
107 AT2G47880 Glutaredoxin family protein -0.56 0.34 -0.32
108 AT3G07090 PPPDE putative thiol peptidase family protein -0.55 0.32 -0.32
109 AT1G54050 HSP20-like chaperones superfamily protein -0.55 0.31 -0.32
110 ATMG00060 NADH dehydrogenase subunit 5C NADH DEHYDROGENASE SUBUNIT 5, NADH
DEHYDROGENASE SUBUNIT 5.3, NADH
dehydrogenase subunit 5C		 0.55 0.31 -0.32
111 AT3G46900 copper transporter 2 copper transporter 2 -0.55 0.31 -0.31
112 AT3G20450 B-cell receptor-associated protein 31-like -0.55 0.32 -0.32
113 AT4G36380 Cytochrome P450 superfamily protein ROTUNDIFOLIA 3 0.55 0.32 -0.32
114 AT3G01510 like SEX4 1 like SEX4 1 -0.55 0.31 -0.3
115 AT5G14760 L-aspartate oxidase L-aspartate oxidase -0.55 0.32 -0.33
116 AT2G26980 CBL-interacting protein kinase 3 CBL-interacting protein kinase 3,
SNF1-RELATED PROTEIN KINASE 3.17		 0.55 0.29 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
117 C0016 S-Adenosylmethionine S-Adenosyl-L-methionine S-Adenosyl-L-methionine ethylene biosynthesis I (plants),
scopoletin biosynthesis,
quercetinsulphates biosynthesis,
siroheme biosynthesis,
gibberellin inactivation II (methylation),
suberin biosynthesis,
volatile benzenoid biosynthesis I (ester formation),
S-adenosyl-L-methionine cycle II,
methylhalides biosynthesis (plants),
S-methylmethionine cycle,
ubiquinol-9 biosynthesis (eukaryotic),
nicotianamine biosynthesis,
methionine biosynthesis II,
spermine biosynthesis,
choline biosynthesis II,
diphthamide biosynthesis,
homogalacturonan biosynthesis,
phosphatidylcholine biosynthesis II,
methylquercetin biosynthesis,
plastoquinol biosynthesis,
chlorophyllide a biosynthesis I,
ferulate and sinapate biosynthesis,
ubiquinol-10 biosynthesis (eukaryotic),
phenylpropanoid biosynthesis,
free phenylpropanoid acid biosynthesis,
seleno-amino acid detoxification and volatilization I,
plant sterol biosynthesis,
lipoate biosynthesis and incorporation I,
methyl indole-3-acetate interconversion,
cyclopropane and cyclopropene fatty acid biosynthesis,
spermidine biosynthesis I,
thiamine biosynthesis II,
methionine salvage pathway,
spermidine hydroxycinnamic acid conjugates biosynthesis,
simple coumarins biosynthesis,
phosphatidylcholine biosynthesis IV,
glutathione-mediated detoxification II,
S-adenosyl-L-methionine biosynthesis,
methionine degradation I (to homocysteine),
phosphatidylcholine biosynthesis III,
phylloquinol biosynthesis,
choline biosynthesis I,
biotin biosynthesis II,
vitamin E biosynthesis 		-0.75 0.45 -0.45 C0016
118 C0170 MST_2128.3 - - - -0.73 0.44 -0.43
119 C0168 MST_2023.2 - - - -0.7 0.45 -0.42
120 C0227 Ribose D-Ribose D-Ribose ribose degradation,
guanosine nucleotides degradation I,
pyrimidine salvage pathway,
pyridine nucleotide cycling (plants),
adenine and adenosine salvage II,
guanosine nucleotides degradation II,
guanine and guanosine salvage II,
cis-zeatin biosynthesis,
adenosine nucleotides degradation I,
pyrimidine ribonucleosides degradation II 		0.7 0.45 -0.47 C0227
121 C0255 Trehalose α,α-D-Trehalose Trehalose trehalose degradation II (trehalase),
trehalose biosynthesis I 		-0.65 0.31 -0.33 C0255