AT1G70310 : spermidine synthase 2
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT1G70310
Description spermidine synthase 2
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G70310 spermidine synthase 2 spermidine synthase 2 1 0.3 -0.31
2 AT2G22010 related to KPC1 related to KPC1 -0.78 0.32 -0.33
3 AT3G10730 SAD1/UNC-84 domain protein 2 ARABIDOPSIS SAD1/UNC-84 DOMAIN
PROTEIN 2, SAD1/UNC-84 domain
protein 2		 0.78 0.35 -0.28
4 AT1G09815 polymerase delta 4 polymerase delta 4 0.78 0.29 -0.31
5 AT3G51895 sulfate transporter 3;1 AST12, sulfate transporter 3;1 -0.78 0.32 -0.31
6 AT5G17620 CONTAINS InterPro DOMAIN/s: Plant nuclear matrix 1
(InterPro:IPR010604); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.77 0.33 -0.3
7 AT2G26890 DNAJ heat shock N-terminal domain-containing protein GRAVITROPISM DEFECTIVE 2,
KATAMARI2		 -0.76 0.31 -0.31
8 AT3G11420 Protein of unknown function (DUF604) -0.76 0.3 -0.32
9 AT5G11760 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1764, eukaryotic (InterPro:IPR013885);
Has 1807 Blast hits to 1807 proteins in 277 species: Archae
- 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants -
385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI
BLink).		 0.75 0.33 -0.3
10 AT5G11700 LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: glycine-rich protein
(TAIR:AT4G32920.3); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.75 0.3 -0.3
11 AT3G51400 Arabidopsis protein of unknown function (DUF241) 0.75 0.31 -0.32
12 AT5G64670 Ribosomal protein L18e/L15 superfamily protein 0.75 0.31 -0.32
13 AT5G05430 RNA-binding protein 0.75 0.31 -0.31
14 AT3G02790 zinc finger (C2H2 type) family protein 0.74 0.32 -0.31
15 AT1G35620 PDI-like 5-2 ARABIDOPSIS THALIANA PROTEIN
DISULFIDE ISOMERASE 8, PDI-like
5-2, PROTEIN DISULFIDE ISOMERASE
8, PDI-like 5-2		 0.74 0.31 -0.31
16 AT1G69610 Protein of unknown function (DUF1666) -0.73 0.31 -0.31
17 AT5G52410 CONTAINS InterPro DOMAIN/s: S-layer homology domain
(InterPro:IPR001119); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G23890.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.73 0.31 -0.31
18 AT4G01990 Tetratricopeptide repeat (TPR)-like superfamily protein 0.73 0.29 -0.32
19 AT4G33040 Thioredoxin superfamily protein -0.73 0.33 -0.3
20 AT4G34750 SAUR-like auxin-responsive protein family 0.73 0.32 -0.34
21 AT1G24070 cellulose synthase-like A10 cellulose synthase-like A10,
CELLULOSE SYNTHASE LIKE A10,
cellulose synthase-like A10		 -0.73 0.32 -0.34
22 AT5G49660 Leucine-rich repeat transmembrane protein kinase family
protein		 XYLEM INTERMIXED WITH PHLOEM 1 -0.73 0.31 -0.31
23 AT3G15880 WUS-interacting protein 2 TOPLESS-RELATED 4, WUS-interacting
protein 2		 -0.73 0.33 -0.31
24 AT4G31460 Ribosomal L28 family 0.73 0.3 -0.32
25 AT2G39900 GATA type zinc finger transcription factor family protein WLIM2a 0.73 0.32 -0.31
26 AT3G14270 phosphatidylinositol-4-phosphate 5-kinase family protein FORMS APLOID AND BINUCLEATE CELLS
1B		 -0.72 0.34 -0.3
27 AT3G62590 alpha/beta-Hydrolases superfamily protein -0.72 0.33 -0.31
28 AT2G28320 Pleckstrin homology (PH) and lipid-binding START
domains-containing protein		 -0.72 0.3 -0.33
29 AT3G14080 Small nuclear ribonucleoprotein family protein 0.72 0.31 -0.3
30 AT5G05990 Mitochondrial glycoprotein family protein 0.72 0.29 -0.32
31 AT5G24810 ABC1 family protein -0.71 0.32 -0.33
32 AT4G11240 Calcineurin-like metallo-phosphoesterase superfamily
protein		 TOPP7 0.71 0.3 -0.31
33 AT5G02540 NAD(P)-binding Rossmann-fold superfamily protein 0.71 0.31 -0.32
34 AT3G23880 F-box and associated interaction domains-containing protein 0.71 0.31 -0.32
35 AT1G24460 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G31570.1); Has 181008 Blast hits to 85359 proteins
in 3551 species: Archae - 3290; Bacteria - 48304; Metazoa -
70793; Fungi - 13943; Plants - 10118; Viruses - 785; Other
Eukaryotes - 33775 (source: NCBI BLink).		 TGN-localized SYP41 interacting
protein		 -0.71 0.33 -0.3
36 AT5G58690 phosphatidylinositol-speciwc phospholipase C5 ATPLC5,
phosphatidylinositol-speciwc
phospholipase C5		 -0.71 0.34 -0.3
37 AT5G22850 Eukaryotic aspartyl protease family protein -0.71 0.29 -0.32
38 AT1G09800 Pseudouridine synthase family protein 0.71 0.3 -0.31
39 AT3G14720 MAP kinase 19 ARABIDOPSIS THALIANA MAP KINASE
19, MAP kinase 19		 -0.7 0.3 -0.32
40 AT5G15770 glucose-6-phosphate acetyltransferase 1 glucose-6-phosphate
acetyltransferase 1,
glucose-6-phosphate
acetyltransferase 1		 0.7 0.29 -0.33
41 AT3G49940 LOB domain-containing protein 38 LOB domain-containing protein 38 0.7 0.32 -0.32
42 AT5G53980 homeobox protein 52 homeobox protein 52, homeobox
protein 52		 0.7 0.31 -0.3
43 AT1G59820 aminophospholipid ATPase 3 aminophospholipid ATPase 3 -0.7 0.33 -0.32
44 AT5G64900 precursor of peptide 1 ARABIDOPSIS THALIANA PEPTIDE 1,
PEPTIDE 1, precursor of peptide 1		 -0.69 0.32 -0.29
45 AT5G64650 Ribosomal protein L17 family protein 0.69 0.3 -0.3
46 AT3G63050 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G48075.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.69 0.31 -0.35
47 AT5G57390 AINTEGUMENTA-like 5 AINTEGUMENTA-like 5, CHOTTO 1,
EMBRYOMAKER, PLETHORA 5		 -0.69 0.32 -0.31
48 AT4G29870 Oligosaccharyltransferase complex/magnesium transporter
family protein		 0.69 0.32 -0.31
49 AT5G15230 GAST1 protein homolog 4 GAST1 protein homolog 4 0.69 0.32 -0.32
50 AT2G01460 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.68 0.32 -0.31
51 AT5G40210 nodulin MtN21 /EamA-like transporter family protein -0.68 0.31 -0.32
52 AT1G15780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast
hits to 43153 proteins in 1828 species: Archae - 30;
Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants -
7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI
BLink).		 -0.68 0.33 -0.3
53 AT4G11370 RING-H2 finger A1A RING-H2 finger A1A -0.68 0.33 -0.33
54 AT5G52430 hydroxyproline-rich glycoprotein family protein -0.68 0.32 -0.31
55 AT5G01820 serine/threonine protein kinase 1 ATCIPK14, serine/threonine protein
kinase 1, CBL-INTERACTING PROTEIN
KINASE 14, SOS2-like protein
kinase 24, SNF1-RELATED PROTEIN
KINASE 3.15, serine/threonine
protein kinase 1		 -0.67 0.32 -0.33
56 AT1G24330 ARM repeat superfamily protein -0.67 0.33 -0.34
57 AT5G38120 AMP-dependent synthetase and ligase family protein 4CL8 -0.67 0.32 -0.33
58 AT4G11800 Calcineurin-like metallo-phosphoesterase superfamily
protein		 -0.67 0.3 -0.32
59 AT5G10940 transducin family protein / WD-40 repeat family protein ALTERED SEED GERMINATION 2 -0.67 0.31 -0.3
60 AT3G07160 glucan synthase-like 10 glucan synthase-like 10, CALS9,
gsl10, glucan synthase-like 10		 -0.66 0.34 -0.3
61 AT1G68600 Aluminium activated malate transporter family protein -0.66 0.3 -0.32
62 AT1G48260 CBL-interacting protein kinase 17 CBL-interacting protein kinase
17, SNF1-RELATED PROTEIN KINASE
3.21		 -0.66 0.33 -0.32
63 AT1G53100 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.66 0.32 -0.3
64 AT5G24350 CONTAINS InterPro DOMAIN/s: Secretory pathway Sec39
(InterPro:IPR013244); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).		 -0.65 0.3 -0.32
65 AT1G78490 cytochrome P450, family 708, subfamily A, polypeptide 3 cytochrome P450, family 708,
subfamily A, polypeptide 3		 -0.65 0.33 -0.32
66 AT1G58230 binding -0.65 0.32 -0.29
67 AT5G49130 MATE efflux family protein -0.65 0.32 -0.31
68 AT1G02080 transcription regulators -0.65 0.32 -0.3
69 AT1G68795 CLAVATA3/ESR-RELATED 12 CLAVATA3/ESR-RELATED 12 -0.65 0.34 -0.33
70 AT5G67210 Protein of unknown function (DUF579) IRX15-LIKE -0.64 0.33 -0.33
71 AT1G66390 myb domain protein 90 ATMYB90, myb domain protein 90,
PRODUCTION OF ANTHOCYANIN PIGMENT
2		 -0.64 0.32 -0.32
72 AT1G12880 nudix hydrolase homolog 12 nudix hydrolase homolog 12, nudix
hydrolase homolog 12		 -0.64 0.28 -0.32
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
73 C0258 Tryptophan amide (NH3+) D,L-Tryptophan amide (NH3+) - - -0.76 0.43 -0.45
74 C0014 O-Acetylserine O-Acetyl-L-serine O-Acetyl-L-serine cysteine biosynthesis I,
seleno-amino acid biosynthesis 		-0.68 0.31 -0.3 C0014