AT1G11930 : -
Query Information
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AGICode AT1G11930
Description Predicted pyridoxal phosphate-dependent enzyme, YBL036C type
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G11930 Predicted pyridoxal phosphate-dependent enzyme, YBL036C
type		 1 0.3 -0.31
2 AT2G20920 Protein of unknown function (DUF3353) 0.79 0.3 -0.32
3 AT1G66900 alpha/beta-Hydrolases superfamily protein 0.79 0.33 -0.32
4 AT5G65840 Thioredoxin superfamily protein 0.79 0.32 -0.33
5 AT4G19840 phloem protein 2-A1 phloem protein 2-A1, phloem
protein 2-A1, phloem protein 2-A1		 0.79 0.31 -0.31
6 AT3G06170 Serinc-domain containing serine and sphingolipid
biosynthesis protein		 0.76 0.3 -0.3
7 AT1G73740 UDP-Glycosyltransferase superfamily protein 0.76 0.31 -0.3
8 AT5G19070 SNARE associated Golgi protein family 0.76 0.32 -0.3
9 AT5G13740 zinc induced facilitator 1 zinc induced facilitator 1 0.76 0.31 -0.31
10 AT2G14460 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.76 0.29 -0.31
11 AT1G55280 Lipase/lipooxygenase, PLAT/LH2 family protein 0.76 0.33 -0.33
12 AT5G49560 Putative methyltransferase family protein -0.76 0.34 -0.34
13 AT5G48370 Thioesterase/thiol ester dehydrase-isomerase superfamily
protein		 0.76 0.33 -0.33
14 AT5G27280 Zim17-type zinc finger protein 0.76 0.3 -0.3
15 AT1G49970 CLP protease proteolytic subunit 1 CLP protease proteolytic subunit
1, NUCLEAR CLPP 5, SUPPRESSOR OF
VARIEGATION 2		 0.76 0.34 -0.32
16 AT3G44620 protein tyrosine phosphatases;protein tyrosine phosphatases 0.75 0.32 -0.3
17 AT4G11980 nudix hydrolase homolog 14 ARABIDOPSIS THALIANA NUDIX
HYDROLASE HOMOLOG 14, nudix
hydrolase homolog 14, nudix
hydrolase homolog 14		 0.75 0.3 -0.34
18 AT1G31440 SH3 domain-containing protein 0.75 0.31 -0.29
19 AT5G61500 autophagy 3 (APG3) ATATG3, ATG3 0.75 0.31 -0.3
20 AT1G29390 cold regulated 314 thylakoid membrane 2 cold regulated 314 thylakoid
membrane 2, COLD REGULATED 314
INNER MEMBRANE 2		 0.74 0.32 -0.32
21 AT4G16830 Hyaluronan / mRNA binding family 0.74 0.33 -0.32
22 AT5G19140 Aluminium induced protein with YGL and LRDR motifs AILP1, ATAILP1 0.74 0.3 -0.32
23 AT1G63660 GMP synthase (glutamine-hydrolyzing), putative / glutamine
amidotransferase, putative		 -0.74 0.29 -0.32
24 AT1G05900 endonuclease III 2 ATNTH2, endonuclease III 2 0.74 0.32 -0.34
25 AT2G22740 SU(VAR)3-9 homolog 6 SET DOMAIN PROTEIN 23, SU(VAR)3-9
homolog 6		 0.74 0.3 -0.35
26 AT1G44770 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G49710.3); Has 81 Blast hits
to 81 proteins in 17 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.73 0.32 -0.31
27 AT3G57490 Ribosomal protein S5 family protein -0.73 0.3 -0.32
28 AT3G10210 SEC14 cytosolic factor family protein / phosphoglyceride
transfer family protein		 0.73 0.31 -0.3
29 AT3G17800 Protein of unknown function (DUF760) 0.73 0.31 -0.32
30 AT5G20900 jasmonate-zim-domain protein 12 jasmonate-zim-domain protein 12,
TIFY3B		 0.73 0.31 -0.33
31 AT5G16290 VALINE-TOLERANT 1 VALINE-TOLERANT 1 0.72 0.31 -0.31
32 AT2G46030 ubiquitin-conjugating enzyme 6 ubiquitin-conjugating enzyme 6 0.72 0.31 -0.33
33 AT4G29670 atypical CYS HIS rich thioredoxin 2 atypical CYS HIS rich thioredoxin
2		 0.72 0.32 -0.3
34 AT3G60810 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1499 (InterPro:IPR010865); Has 444
Blast hits to 444 proteins in 143 species: Archae - 0;
Bacteria - 268; Metazoa - 0; Fungi - 0; Plants - 51;
Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink).		 0.72 0.32 -0.3
35 AT5G17530 phosphoglucosamine mutase family protein 0.72 0.33 -0.31
36 AT5G03840 PEBP (phosphatidylethanolamine-binding protein) family
protein		 TERMINAL FLOWER 1, TERMINAL FLOWER
1		 -0.72 0.3 -0.31
37 AT3G22260 Cysteine proteinases superfamily protein 0.72 0.31 -0.34
38 AT1G63810 CONTAINS InterPro DOMAIN/s: Nrap protein
(InterPro:IPR005554); Has 396 Blast hits to 382 proteins in
182 species: Archae - 3; Bacteria - 2; Metazoa - 142; Fungi
- 146; Plants - 43; Viruses - 0; Other Eukaryotes - 60
(source: NCBI BLink).		 -0.71 0.3 -0.29
39 AT4G20410 gamma-soluble NSF attachment protein GAMMA-SOLUBLE NSF ATTACHMENT
PROTEIN, gamma-soluble NSF
attachment protein		 0.71 0.32 -0.32
40 AT2G42750 DNAJ heat shock N-terminal domain-containing protein 0.71 0.32 -0.32
41 AT3G18600 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.71 0.31 -0.31
42 AT2G10950 BSD domain-containing protein 0.71 0.31 -0.31
43 AT5G49550 Putative homolog of mammalian BLOC-1 Subunit 2. Protein -
protein interaction with BLOS1.		 BLOC subunit 2 0.71 0.31 -0.3
44 AT2G20740 Tetraspanin family protein 0.71 0.32 -0.31
45 AT3G56070 rotamase cyclophilin 2 rotamase cyclophilin 2 -0.7 0.31 -0.32
46 AT5G46240 potassium channel in Arabidopsis thaliana 1 potassium channel in Arabidopsis
thaliana 1		 0.7 0.32 -0.31
47 AT5G67180 target of early activation tagged (EAT) 3 target of early activation tagged
(EAT) 3		 0.7 0.31 -0.34
48 AT4G34630 unknown protein; Has 30 Blast hits to 30 proteins in 10
species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0;
Plants - 24; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 0.7 0.31 -0.3
49 AT2G15310 ADP-ribosylation factor B1A ADP-ribosylation factor B1A,
ADP-ribosylation factor B1A		 0.7 0.29 -0.31
50 AT3G21270 DOF zinc finger protein 2 DOF zinc finger protein 2, DOF
zinc finger protein 2		 0.7 0.3 -0.33
51 AT1G16480 Tetratricopeptide repeat (TPR)-like superfamily protein -0.7 0.32 -0.32
52 AT4G27250 NAD(P)-binding Rossmann-fold superfamily protein -0.69 0.34 -0.33
53 AT3G56240 copper chaperone copper chaperone 0.69 0.31 -0.3
54 AT2G23840 HNH endonuclease 0.69 0.32 -0.31
55 AT3G04230 Ribosomal protein S5 domain 2-like superfamily protein -0.69 0.28 -0.31
56 AT3G45140 lipoxygenase 2 ARABIODOPSIS THALIANA LIPOXYGENASE
2, lipoxygenase 2		 0.69 0.31 -0.32
57 AT4G17750 heat shock factor 1 ARABIDOPSIS THALIANA HEAT SHOCK
FACTOR 1, ARABIDOPSIS THALIANA
CLASS A HEAT SHOCK FACTOR 1A, heat
shock factor 1, CLASS A HEAT SHOCK
FACTOR 1A		 0.69 0.32 -0.35
58 AT2G28250 Protein kinase superfamily protein NCRK -0.69 0.32 -0.31
59 AT5G24450 Transcription factor IIIC, subunit 5 0.69 0.3 -0.32
60 AT2G22410 SLOW GROWTH 1 SLOW GROWTH 1 -0.69 0.29 -0.32
61 AT1G29980 Protein of unknown function, DUF642 -0.69 0.33 -0.3
62 AT1G14780 MAC/Perforin domain-containing protein -0.69 0.3 -0.31
63 AT3G13590 Cysteine/Histidine-rich C1 domain family protein 0.69 0.3 -0.31
64 AT2G27960 cyclin-dependent kinase-subunit 1 cyclin-dependent kinase-subunit 1,
CKS1AT		 0.69 0.31 -0.3
65 AT3G19553 Amino acid permease family protein 0.68 0.32 -0.3
66 AT3G51670 SEC14 cytosolic factor family protein / phosphoglyceride
transfer family protein		 0.68 0.33 -0.29
67 AT4G27010 CONTAINS InterPro DOMAIN/s: Ribosome 60S biogenesis
N-terminal (InterPro:IPR021714); BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT1G72270.1); Has
30201 Blast hits to 17322 proteins in 780 species: Archae -
12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants
- 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 EMBRYO DEFECTIVE 2788 -0.68 0.31 -0.33
68 AT5G17960 Cysteine/Histidine-rich C1 domain family protein -0.68 0.29 -0.32
69 AT5G06800 myb-like HTH transcriptional regulator family protein -0.68 0.29 -0.3
70 AT5G65090 DNAse I-like superfamily protein BRISTLED 1, DEFORMED ROOT HAIRS 4,
MRH3		 -0.68 0.32 -0.31
71 AT5G53450 OBP3-responsive gene 1 OBP3-responsive gene 1 0.68 0.3 -0.33
72 AT5G05930 guanylyl cyclase 1 ARABIDOPSIS GUANYLYL CYCLASE 1,
guanylyl cyclase 1		 0.68 0.3 -0.32
73 AT5G46760 Basic helix-loop-helix (bHLH) DNA-binding family protein MYC3 0.68 0.32 -0.3
74 AT2G32280 Protein of unknown function (DUF1218) -0.68 0.32 -0.32
75 AT2G23760 BEL1-like homeodomain 4 BEL1-like homeodomain 4, SAWTOOTH
2		 0.68 0.32 -0.33
76 AT5G66050 Wound-responsive family protein 0.68 0.34 -0.32
77 AT4G21150 ribophorin II (RPN2) family protein HAPLESS 6 -0.67 0.32 -0.32
78 AT3G22250 UDP-Glycosyltransferase superfamily protein 0.67 0.29 -0.3
79 AT5G50390 Pentatricopeptide repeat (PPR-like) superfamily protein EMBRYO DEFECTIVE 3141 -0.67 0.35 -0.33
80 AT3G18290 zinc finger protein-related BRUTUS, embryo defective 2454 0.67 0.33 -0.31
81 AT5G19040 isopentenyltransferase 5 Arabidopsis thaliana
ISOPENTENYLTRANSFERASE 5,
isopentenyltransferase 5		 -0.67 0.31 -0.31
82 AT5G16800 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0.67 0.31 -0.33
83 AT5G52470 fibrillarin 1 ATFBR1, ATFIB1, FIBRILLARIN 1,
fibrillarin 1,
SKP1/ASK1-INTERACTING PROTEIN		 -0.67 0.32 -0.31
84 AT3G23690 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.67 0.33 -0.29
85 AT4G37950 Rhamnogalacturonate lyase family protein -0.66 0.3 -0.32
86 AT1G79760 downstream target of AGL15-4 downstream target of AGL15-4 -0.66 0.3 -0.32
87 AT1G16950 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: stamen; EXPRESSED
DURING: 4 anthesis; Has 17 Blast hits to 17 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.66 0.32 -0.29
88 AT5G51670 Protein of unknown function (DUF668) -0.66 0.32 -0.31
89 AT1G06900 Insulinase (Peptidase family M16) family protein -0.66 0.3 -0.33
90 AT5G55370 MBOAT (membrane bound O-acyl transferase) family protein -0.65 0.32 -0.33
91 AT3G43670 Copper amine oxidase family protein -0.65 0.33 -0.31
92 AT1G68120 basic pentacysteine 3 ATBPC3, basic pentacysteine 3 -0.65 0.32 -0.33
93 AT2G34750 RNA polymerase I specific transcription initiation factor
RRN3 protein		 -0.65 0.32 -0.3
94 AT3G55150 exocyst subunit exo70 family protein H1 exocyst subunit exo70 family
protein H1, exocyst subunit exo70
family protein H1		 -0.65 0.31 -0.28
95 AT5G47600 HSP20-like chaperones superfamily protein -0.65 0.31 -0.31
96 AT2G38590 F-box and associated interaction domains-containing protein -0.65 0.32 -0.3
97 AT4G22130 STRUBBELIG-receptor family 8 STRUBBELIG-receptor family 8 -0.65 0.32 -0.32
98 AT1G48180 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G51670.1); Has 39 Blast hits
to 39 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.65 0.3 -0.31
99 AT4G31470 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 -0.64 0.33 -0.32
100 AT5G08600 U3 ribonucleoprotein (Utp) family protein -0.64 0.33 -0.31
101 AT4G00390 DNA-binding storekeeper protein-related transcriptional
regulator		 -0.64 0.31 -0.32
102 AT5G55250 IAA carboxylmethyltransferase 1 AtIAMT1, IAA
carboxylmethyltransferase 1		 -0.64 0.31 -0.32
103 AT2G43480 Peroxidase superfamily protein -0.64 0.3 -0.31
104 AT2G15130 Plant basic secretory protein (BSP) family protein -0.64 0.32 -0.31
105 AT1G33280 NAC domain containing protein 15 NAC domain containing protein 15,
BEARSKIN 1, NAC domain containing
protein 15		 -0.64 0.3 -0.31
106 AT5G13680 IKI3 family protein ABA-OVERLY SENSITIVE 1, AtELP1,
ELONGATA 2		 -0.64 0.32 -0.3
107 AT3G43630 Vacuolar iron transporter (VIT) family protein -0.64 0.32 -0.28
108 AT5G53190 Nodulin MtN3 family protein AtSWEET3, SWEET3 -0.63 0.34 -0.31
109 AT3G59220 pirin ATPIRIN1, pirin, PRN1 -0.63 0.34 -0.32
110 AT5G40100 Disease resistance protein (TIR-NBS-LRR class) family -0.63 0.31 -0.31
111 AT4G01720 WRKY family transcription factor AtWRKY47, WRKY47 -0.63 0.34 -0.33
112 AT5G51720 2 iron, 2 sulfur cluster binding -0.63 0.3 -0.33
113 AT1G50110 D-aminoacid aminotransferase-like PLP-dependent enzymes
superfamily protein		 -0.63 0.28 -0.32
114 AT4G38440 LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 12 growth stages; CONTAINS InterPro
DOMAIN/s: RNA polymerase II-associated protein 1,
C-terminal (InterPro:IPR013929), RNA polymerase
II-associated protein 1, N-terminal (InterPro:IPR013930);
Has 276 Blast hits to 220 proteins in 102 species: Archae -
0; Bacteria - 2; Metazoa - 151; Fungi - 65; Plants - 41;
Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).		 MINIYO -0.62 0.32 -0.32
115 AT1G79890 RAD3-like DNA-binding helicase protein -0.62 0.34 -0.31
116 AT5G54040 Cysteine/Histidine-rich C1 domain family protein -0.62 0.32 -0.3
117 AT1G15460 HCO3- transporter family ARABIDOPSIS THALIANA REQUIRES HIGH
BORON 4, REQUIRES HIGH BORON 4		 -0.62 0.31 -0.32
118 AT1G31850 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.62 0.32 -0.33
119 AT3G01070 early nodulin-like protein 16 AtENODL16, early nodulin-like
protein 16		 -0.62 0.31 -0.32
120 AT1G50760 Aminotransferase-like, plant mobile domain family protein -0.62 0.3 -0.3
121 AT5G47540 Mo25 family protein -0.62 0.34 -0.32
122 AT5G65630 global transcription factor group E7 global transcription factor group
E7		 -0.61 0.29 -0.3
123 AT4G24260 glycosyl hydrolase 9A3 glycosyl hydrolase 9A3, glycosyl
hydrolase 9A3, KOR3		 -0.61 0.32 -0.3
124 AT5G27920 F-box family protein -0.61 0.29 -0.31
125 AT5G45780 Leucine-rich repeat protein kinase family protein -0.61 0.33 -0.3
126 AT1G76930 extensin 4 EXTENSIN 1, extensin 4, extensin
1, extensin 4, OBP3-RESPONSIVE
GENE 5		 -0.61 0.31 -0.33
127 AT1G74820 RmlC-like cupins superfamily protein -0.61 0.32 -0.31
128 AT2G40300 ferritin 4 ferritin 4, ferritin 4 -0.61 0.33 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
129 C0026 2-Hydroxyisobutyric acid - - β oxidation 0.82 0.45 -0.43
130 C0091 Fructose-1,6-bisphosphate D-Fructose-1,6-bisphosphate Fructose-1,6-bisphosphate gluconeogenesis I,
Calvin-Benson-Bassham cycle,
glycolysis IV (plant cytosol),
glycolysis I,
CA1P biosynthesis,
sucrose biosynthesis I 		0.79 0.48 -0.43 C0091
131 C0011 N-Acetyl-glutamic acid N-Acetyl-D,L-glutamic acid N-Acetyl-L-glutamate arginine biosynthesis II (acetyl cycle),
ornithine biosynthesis 		0.77 0.42 -0.45 C0011
132 C0032 3-Phosphoglyceric acid 3-Phospho-(R)-glyceric acid 3-Phosphoglycerate glycolysis I,
gluconeogenesis I,
Calvin-Benson-Bassham cycle,
sucrose biosynthesis I,
serine biosynthesis,
photorespiration,
Rubisco shunt,
glycolysis IV (plant cytosol) 		0.72 0.44 -0.47 C0032
133 C0198 Phosphatidylethanolamine-34:0 - - - -0.7 0.46 -0.45
134 C0087 Erythrose-4-phosphate D-Erythrose-4-phosphate D-Erythrose-4-phosphate Rubisco shunt,
pentose phosphate pathway (non-oxidative branch),
chorismate biosynthesis,
Calvin-Benson-Bassham cycle 		0.69 0.42 -0.43 C0087
135 C0027 2-Oxoglutaric acid - α-Ketoglutarate gibberellin biosynthesis III (early C-13 hydroxylation),
leucopelargonidin and leucocyanidin biosynthesis,
aspartate degradation II,
ornithine biosynthesis,
isoleucine biosynthesis I (from threonine),
pantothenate biosynthesis,
phenylalanine degradation III,
flavonol biosynthesis,
lysine biosynthesis VI,
luteolin biosynthesis,
ammonia assimilation cycle II,
serine biosynthesis,
flavonoid biosynthesis,
glutamate biosynthesis V,
aspartate biosynthesis,
glutamate degradation I,
gibberellin inactivation I (2beta-hydroxylation),
alanine degradation III,
photorespiration,
valine biosynthesis,
glycine biosynthesis,
arginine biosynthesis II (acetyl cycle),
arginine degradation I (arginase pathway),
gibberellin biosynthesis II (early C-3 hydroxylation),
leucine biosynthesis,
glutamate biosynthesis IV,
tyrosine biosynthesis II,
proline biosynthesis III,
citrulline biosynthesis,
anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside),
L-Ndelta-acetylornithine biosynthesis,
isoleucine degradation I,
alanine biosynthesis II,
tyrosine biosynthesis I,
TCA cycle variation III (eukaryotic),
leucine degradation I,
alanine degradation II (to D-lactate),
TCA cycle variation V (plant),
arginine degradation VI (arginase 2 pathway),
valine degradation I,
gibberellin biosynthesis I (non C-3, non C-13 hydroxylation),
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
2-ketoglutarate dehydrogenase complex,
glutamate degradation IV,
tyrosine degradation I,
anthocyanin biosynthesis (delphinidin 3-O-glucoside),
IAA biosynthesis I,
phenylalanine biosynthesis II,
lysine degradation II,
scopoletin biosynthesis,
4-hydroxyphenylpyruvate biosynthesis,
histidine biosynthesis,
glutamine biosynthesis III,
leucodelphinidin biosynthesis 		0.68 0.43 -0.45 C0027
136 C0145 Maltotetraose - Maltotetraose starch degradation II -0.68 0.45 -0.46 C0145
137 C0243 Succinic acid - Succinate flavonol biosynthesis,
glyoxylate cycle,
gibberellin biosynthesis III (early C-13 hydroxylation),
TCA cycle variation V (plant),
TCA cycle variation III (eukaryotic),
aerobic respiration (alternative oxidase pathway),
gibberellin inactivation I (2beta-hydroxylation),
4-aminobutyrate degradation IV,
luteolin biosynthesis,
anthocyanin biosynthesis (delphinidin 3-O-glucoside),
leucodelphinidin biosynthesis,
glutamate degradation IV,
gibberellin biosynthesis I (non C-3, non C-13 hydroxylation),
succinate + a ubiquinone -> a ubiquinol + fumarate,
gibberellin biosynthesis II (early C-3 hydroxylation),
flavonoid biosynthesis,
superpathway of glyoxylate cycle and fatty acid degradation,
aerobic respiration (cytochrome c),
leucopelargonidin and leucocyanidin biosynthesis,
anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside),
scopoletin biosynthesis 		0.67 0.32 -0.33 C0243