AGICode | AT1G03210 |
Description | Phenazine biosynthesis PhzC/PhzF protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT1G03210 | Phenazine biosynthesis PhzC/PhzF protein | 1 | 0.3 | -0.33 | |||
2 | AT1G19710 | UDP-Glycosyltransferase superfamily protein | 0.76 | 0.33 | -0.32 | |||
3 | AT3G53960 | Major facilitator superfamily protein | -0.76 | 0.32 | -0.31 | |||
4 | AT3G18040 | MAP kinase 9 | MAP kinase 9 | -0.74 | 0.32 | -0.29 | ||
5 | AT3G57800 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
-0.74 | 0.33 | -0.34 | |||
6 | ATCG00065 | ribosomal protein S12A | RIBOSOMAL PROTEIN S12, ribosomal protein S12A |
-0.73 | 0.31 | -0.33 | ||
7 | AT2G17730 | NEP-interacting protein 2 | NEP-interacting protein 2 | -0.73 | 0.31 | -0.32 | ||
8 | AT5G50920 | CLPC homologue 1 | ATHSP93-V, CLPC, CLPC homologue 1, DE-REGULATED CAO ACCUMULATION 1, HEAT SHOCK PROTEIN 93-V |
-0.73 | 0.35 | -0.3 | ||
9 | AT4G30790 | INVOLVED IN: autophagy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Autophagy-related protein 17 (InterPro:IPR007240), Autophagy-related protein 11 (InterPro:IPR019460); Has 8793 Blast hits to 6268 proteins in 570 species: Archae - 89; Bacteria - 657; Metazoa - 4844; Fungi - 808; Plants - 441; Viruses - 15; Other Eukaryotes - 1939 (source: NCBI BLink). |
-0.72 | 0.33 | -0.32 | |||
10 | AT5G52660 | Homeodomain-like superfamily protein | -0.72 | 0.31 | -0.31 | |||
11 | AT3G54260 | TRICHOME BIREFRINGENCE-LIKE 36 | TRICHOME BIREFRINGENCE-LIKE 36 | 0.71 | 0.33 | -0.31 | ||
12 | AT5G09620 | Octicosapeptide/Phox/Bem1p family protein | -0.71 | 0.31 | -0.33 | |||
13 | AT1G06430 | FTSH protease 8 | FTSH protease 8 | -0.71 | 0.29 | -0.31 | ||
14 | AT2G19970 | CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein |
0.71 | 0.29 | -0.33 | |||
15 | AT1G68020 | UDP-Glycosyltransferase / trehalose-phosphatase family protein |
ATTPS6, TREHALOSE -6-PHOSPHATASE SYNTHASE S6 |
-0.71 | 0.29 | -0.31 | ||
16 | AT4G35790 | phospholipase D delta | ARABIDOPSIS THALIANA PHOSPHOLIPASE D DELTA, phospholipase D delta |
-0.71 | 0.32 | -0.32 | ||
17 | AT1G30900 | VACUOLAR SORTING RECEPTOR 6 | binding protein of 80 kDa 3;3, VACUOLAR SORTING RECEPTOR 3;3, VACUOLAR SORTING RECEPTOR 6 |
0.7 | 0.33 | -0.33 | ||
18 | AT3G14840 | Leucine-rich repeat transmembrane protein kinase | 0.7 | 0.3 | -0.33 | |||
19 | AT2G32090 | Lactoylglutathione lyase / glyoxalase I family protein | -0.7 | 0.29 | -0.33 | |||
20 | AT1G62310 | transcription factor jumonji (jmjC) domain-containing protein |
-0.69 | 0.33 | -0.31 | |||
21 | ATMG00580 | NADH dehydrogenase subunit 4 | NADH dehydrogenase subunit 4 | -0.69 | 0.33 | -0.33 | ||
22 | AT2G37130 | Peroxidase superfamily protein | 0.68 | 0.33 | -0.32 | |||
23 | AT2G43050 | Plant invertase/pectin methylesterase inhibitor superfamily | ATPMEPCRD | 0.68 | 0.29 | -0.31 | ||
24 | AT1G78140 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
-0.68 | 0.31 | -0.3 | |||
25 | AT1G07250 | UDP-glucosyl transferase 71C4 | UDP-glucosyl transferase 71C4 | -0.68 | 0.34 | -0.31 | ||
26 | AT3G02885 | GAST1 protein homolog 5 | GAST1 protein homolog 5 | 0.68 | 0.32 | -0.29 | ||
27 | AT3G05010 | Protein of unknown function, transmembrane-40 | -0.68 | 0.28 | -0.34 | |||
28 | AT1G30510 | root FNR 2 | root FNR 2, root FNR 2 | 0.68 | 0.31 | -0.32 | ||
29 | AT1G68490 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13390.2); Has 125 Blast hits to 125 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.68 | 0.33 | -0.34 | |||
30 | AT1G29980 | Protein of unknown function, DUF642 | 0.68 | 0.33 | -0.31 | |||
31 | AT4G00450 | RNA polymerase II transcription mediators | CENTER CITY, CRYPTIC PRECOCIOUS | -0.68 | 0.31 | -0.33 | ||
32 | AT2G33700 | Protein phosphatase 2C family protein | -0.68 | 0.32 | -0.3 | |||
33 | AT1G07310 | Calcium-dependent lipid-binding (CaLB domain) family protein |
-0.67 | 0.34 | -0.31 | |||
34 | AT3G25790 | myb-like transcription factor family protein | 0.67 | 0.3 | -0.32 | |||
35 | AT1G09130 | ATP-dependent caseinolytic (Clp) protease/crotonase family protein |
-0.67 | 0.32 | -0.35 | |||
36 | AT4G00430 | plasma membrane intrinsic protein 1;4 | plasma membrane intrinsic protein 1;4, PLASMA MEMBRANE INTRINSIC PROTEIN 1E, TRANSMEMBRANE PROTEIN C |
-0.67 | 0.32 | -0.32 | ||
37 | AT5G45480 | Protein of unknown function (DUF594) | 0.67 | 0.31 | -0.31 | |||
38 | AT2G30950 | FtsH extracellular protease family | FTSH2, VARIEGATED 2 | -0.67 | 0.31 | -0.31 | ||
39 | AT5G19420 | Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain |
-0.67 | 0.32 | -0.32 | |||
40 | AT5G55170 | small ubiquitin-like modifier 3 | ATSUMO3, SMALL UBIQUITIN-LIKE MODIFIER 3, SMALL UBIQUITIN-LIKE MODIFIER 3, small ubiquitin-like modifier 3 |
0.67 | 0.32 | -0.31 | ||
41 | AT4G31410 | Protein of unknown function (DUF1644) | -0.67 | 0.33 | -0.29 | |||
42 | AT3G09100 | mRNA capping enzyme family protein | -0.67 | 0.32 | -0.33 | |||
43 | AT5G16630 | DNA repair protein Rad4 family | ATRAD4, RAD4 | -0.67 | 0.32 | -0.31 | ||
44 | AT4G32290 | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
0.67 | 0.31 | -0.33 | |||
45 | AT2G44970 | alpha/beta-Hydrolases superfamily protein | -0.66 | 0.35 | -0.32 | |||
46 | AT3G44620 | protein tyrosine phosphatases;protein tyrosine phosphatases | -0.66 | 0.33 | -0.31 | |||
47 | AT5G13640 | phospholipid:diacylglycerol acyltransferase | ARABIDOPSIS THALIANA PHOSPHOLIPID:DIACYLGLYCEROL ACYLTRANSFERASE, phospholipid:diacylglycerol acyltransferase, PHOSPHOLIPID:DIACYLGLYCEROL ACYLTRANSFERASE 1 |
-0.66 | 0.31 | -0.29 | ||
48 | AT1G79890 | RAD3-like DNA-binding helicase protein | 0.66 | 0.3 | -0.31 | |||
49 | AT3G19170 | presequence protease 1 | presequence protease 1, ATZNMP, presequence protease 1 |
-0.66 | 0.31 | -0.32 | ||
50 | AT1G64405 | unknown protein; Has 13 Blast hits to 13 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.66 | 0.32 | -0.34 | |||
51 | AT2G23640 | Reticulan like protein B13 | Reticulan like protein B13 | -0.66 | 0.31 | -0.31 | ||
52 | AT5G65620 | Zincin-like metalloproteases family protein | -0.66 | 0.3 | -0.32 | |||
53 | AT1G26920 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G69760.1); Has 47 Blast hits to 47 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 7; Plants - 34; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). |
-0.66 | 0.3 | -0.31 | |||
54 | AT1G29390 | cold regulated 314 thylakoid membrane 2 | cold regulated 314 thylakoid membrane 2, COLD REGULATED 314 INNER MEMBRANE 2 |
-0.65 | 0.3 | -0.3 | ||
55 | AT1G71030 | MYB-like 2 | ARABIDOPSIS MYB-LIKE 2, MYB-like 2 | -0.65 | 0.29 | -0.31 | ||
56 | AT1G28200 | FH interacting protein 1 | FH interacting protein 1 | -0.65 | 0.32 | -0.3 | ||
57 | AT1G73640 | RAB GTPase homolog A6A | RAB GTPase homolog A6A, RAB GTPase homolog A6A |
0.65 | 0.32 | -0.31 | ||
58 | AT5G60950 | COBRA-like protein 5 precursor | COBRA-like protein 5 precursor | 0.64 | 0.31 | -0.32 | ||
59 | AT5G63370 | Protein kinase superfamily protein | -0.64 | 0.31 | -0.31 | |||
60 | AT3G62820 | Plant invertase/pectin methylesterase inhibitor superfamily protein |
-0.64 | 0.34 | -0.32 | |||
61 | AT5G65890 | ACT domain repeat 1 | ACT domain repeat 1 | -0.64 | 0.33 | -0.32 | ||
62 | AT4G37760 | squalene epoxidase 3 | squalene epoxidase 3 | -0.64 | 0.33 | -0.31 | ||
63 | AT5G41000 | YELLOW STRIPE like 4 | YELLOW STRIPE like 4 | 0.64 | 0.31 | -0.31 | ||
64 | AT4G36670 | Major facilitator superfamily protein | AtPLT6, AtPMT6, polyol transporter 6, polyol/monosaccharide transporter 6 |
0.64 | 0.31 | -0.32 | ||
65 | AT2G37570 | HSP20-like chaperones superfamily protein | sodium- and lithium-tolerant 1 | -0.64 | 0.32 | -0.32 | ||
66 | AT5G36250 | Protein phosphatase 2C family protein | -0.64 | 0.29 | -0.31 | |||
67 | AT3G05510 | Phospholipid/glycerol acyltransferase family protein | -0.64 | 0.31 | -0.32 | |||
68 | AT5G16820 | heat shock factor 3 | ARABIDOPSIS HEAT SHOCK FACTOR 3, ARABIDOPSIS THALIANA CLASS A HEAT SHOCK FACTOR 1B, heat shock factor 3, CLASS A HEAT SHOCK FACTOR 1B |
-0.64 | 0.31 | -0.32 | ||
69 | AT1G55530 | RING/U-box superfamily protein | -0.64 | 0.31 | -0.32 | |||
70 | AT3G20880 | WIP domain protein 4 | WIP domain protein 4 | 0.64 | 0.33 | -0.3 | ||
71 | AT1G49970 | CLP protease proteolytic subunit 1 | CLP protease proteolytic subunit 1, NUCLEAR CLPP 5, SUPPRESSOR OF VARIEGATION 2 |
-0.64 | 0.32 | -0.31 | ||
72 | AT1G48670 | auxin-responsive GH3 family protein | 0.63 | 0.33 | -0.31 | |||
73 | ATCG00530 | CemA-like proton extrusion protein-related | YCF10 | -0.63 | 0.33 | -0.31 | ||
74 | AT5G06440 | BEST Arabidopsis thaliana protein match is: Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR:AT3G11720.3); Has 155 Blast hits to 153 proteins in 39 species: Archae - 0; Bacteria - 4; Metazoa - 5; Fungi - 6; Plants - 101; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). |
-0.63 | 0.32 | -0.31 | |||
75 | AT3G52240 | unknown protein; Has 220 Blast hits to 193 proteins in 66 species: Archae - 0; Bacteria - 15; Metazoa - 53; Fungi - 33; Plants - 66; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). |
-0.63 | 0.31 | -0.3 | |||
76 | AT5G60140 | AP2/B3-like transcriptional factor family protein | 0.63 | 0.3 | -0.32 | |||
77 | ATCG00520 | unfolded protein binding | YCF4 | -0.63 | 0.32 | -0.32 | ||
78 | AT4G01720 | WRKY family transcription factor | AtWRKY47, WRKY47 | 0.63 | 0.33 | -0.31 | ||
79 | AT1G06930 | unknown protein; Has 4478 Blast hits to 355 proteins in 82 species: Archae - 0; Bacteria - 29; Metazoa - 379; Fungi - 125; Plants - 120; Viruses - 25; Other Eukaryotes - 3800 (source: NCBI BLink). |
0.63 | 0.33 | -0.31 | |||
80 | AT1G36980 | unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0220 (InterPro:IPR007919); Has 424 Blast hits to 424 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 228; Fungi - 120; Plants - 62; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). |
-0.63 | 0.31 | -0.31 | |||
81 | AT1G72390 | CONTAINS InterPro DOMAIN/s: Spt20 family (InterPro:IPR021950); Has 8778 Blast hits to 7244 proteins in 477 species: Archae - 6; Bacteria - 326; Metazoa - 4198; Fungi - 1506; Plants - 923; Viruses - 22; Other Eukaryotes - 1797 (source: NCBI BLink). |
-0.63 | 0.31 | -0.31 | |||
82 | AT5G13880 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G47920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.63 | 0.32 | -0.32 | |||
83 | AT2G35610 | xyloglucanase 113 | xyloglucanase 113 | 0.63 | 0.34 | -0.3 | ||
84 | AT1G56300 | Chaperone DnaJ-domain superfamily protein | -0.63 | 0.32 | -0.33 | |||
85 | AT2G36640 | embryonic cell protein 63 | embryonic cell protein 63, embryonic cell protein 63 |
-0.63 | 0.32 | -0.32 | ||
86 | AT3G02555 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16110.1); Has 130 Blast hits to 130 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 130; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.63 | 0.32 | -0.33 | |||
87 | AT2G26670 | Plant haem oxygenase (decyclizing) family protein | ARABIDOPSIS THALIANA HEME OXYGENASE 1, GENOMES UNCOUPLED 2, HEME OXYGENASE 1, HEME OXYGENASE 1, HEME OXYGENASE 6, REVERSAL OF THE DET PHENOTYPE 4 |
-0.62 | 0.3 | -0.34 | ||
88 | AT4G25170 | Uncharacterised conserved protein (UCP012943) | -0.62 | 0.32 | -0.29 | |||
89 | AT5G50230 | Transducin/WD40 repeat-like superfamily protein | -0.62 | 0.31 | -0.31 | |||
90 | ATCG00510 | photsystem I subunit I | photsystem I subunit I | -0.62 | 0.31 | -0.31 | ||
91 | AT4G25940 | ENTH/ANTH/VHS superfamily protein | 0.62 | 0.32 | -0.29 | |||
92 | AT5G47650 | nudix hydrolase homolog 2 | nudix hydrolase homolog 2, ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 2, nudix hydrolase homolog 2 |
-0.62 | 0.32 | -0.33 | ||
93 | AT5G60850 | OBF binding protein 4 | OBF binding protein 4 | -0.62 | 0.29 | -0.31 | ||
94 | AT4G25580 | CAP160 protein | -0.62 | 0.3 | -0.3 | |||
95 | AT1G53400 | Ubiquitin domain-containing protein | -0.62 | 0.3 | -0.32 | |||
96 | AT1G34750 | Protein phosphatase 2C family protein | 0.62 | 0.3 | -0.3 | |||
97 | AT1G43800 | Plant stearoyl-acyl-carrier-protein desaturase family protein |
0.61 | 0.33 | -0.31 | |||
98 | AT1G33960 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
AVRRPT2-INDUCED GENE 1 | 0.61 | 0.33 | -0.3 | ||
99 | AT5G64000 | Inositol monophosphatase family protein | ATSAL2, SAL2 | 0.61 | 0.31 | -0.32 | ||
100 | AT1G66620 | Protein with RING/U-box and TRAF-like domains | 0.61 | 0.32 | -0.32 | |||
101 | AT1G79400 | cation/H+ exchanger 2 | cation/H+ exchanger 2, cation/H+ exchanger 2 |
0.61 | 0.3 | -0.32 | ||
102 | AT1G57590 | Pectinacetylesterase family protein | 0.61 | 0.31 | -0.31 | |||
103 | AT3G63360 | defensin-related | 0.6 | 0.31 | -0.29 | |||
104 | AT4G03610 | Metallo-hydrolase/oxidoreductase superfamily protein | 0.6 | 0.31 | -0.31 | |||
105 | AT3G49740 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.6 | 0.3 | -0.31 | |||
106 | AT2G17900 | SET domain group 37 | ASH1-related 1, SET domain group 37 |
0.6 | 0.32 | -0.31 | ||
107 | AT3G63250 | homocysteine methyltransferase 2 | HOMOCYSTEINE METHYLTRANSFERASE-2, HOMOCYSTEINE METHYLTRANSFERASE-2, homocysteine methyltransferase 2 |
0.6 | 0.32 | -0.31 | ||
108 | AT5G11920 | 6-&1-fructan exohydrolase | 6-&1-fructan exohydrolase, 6-&1-fructan exohydrolase |
0.6 | 0.3 | -0.31 | ||
109 | AT1G58190 | receptor like protein 9 | receptor like protein 9, receptor like protein 9 |
0.59 | 0.3 | -0.31 | ||
110 | AT5G38700 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.04 four leaves visible, LP.10 ten leaves visible, petal differentiation and expansion stage, LP.08 eight leaves visible, LP.12 twelve leaves visible; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02170.1); Has 64 Blast hits to 64 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.59 | 0.34 | -0.31 | |||
111 | AT1G22500 | RING/U-box superfamily protein | Arabidopsis thaliana Arabidopsis toxicos en levadura 15, Arabidopsis toxicos en levadura 15 |
0.59 | 0.33 | -0.33 | ||
112 | AT5G47440 | Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region |
0.59 | 0.32 | -0.32 | |||
113 | AT5G11870 | Alkaline phytoceramidase (aPHC) | 0.59 | 0.34 | -0.31 | |||
114 | AT4G03570 | Cystatin/monellin superfamily protein | 0.58 | 0.33 | -0.33 | |||
115 | AT2G19070 | spermidine hydroxycinnamoyl transferase | spermidine hydroxycinnamoyl transferase |
0.58 | 0.32 | -0.31 | ||
116 | AT2G39410 | alpha/beta-Hydrolases superfamily protein | 0.58 | 0.32 | -0.32 | |||
117 | AT5G42830 | HXXXD-type acyl-transferase family protein | 0.58 | 0.33 | -0.33 | |||
118 | AT2G02960 | RING/FYVE/PHD zinc finger superfamily protein | 0.58 | 0.33 | -0.31 | |||
119 | AT3G06300 | P4H isoform 2 | P4H isoform 2, prolyl 4-hydroxylase 2 |
0.58 | 0.31 | -0.33 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
120 | C0079 | Digalactosyldiacylglycerol-34:5 | - | Digalactosyldiacylglycerol-34:5 | triacylglycerol degradation, linoleate biosynthesis I, glycolipid biosynthesis, glutathione redox reactions I |
-0.75 | 0.48 | -0.45 | ||
121 | C0153 | Monogalactosyldiacylgycerol-34:6 | - | a Monogalactosyldiacylgycerol | glycolipid biosynthesis, triacylglycerol degradation, linoleate biosynthesis I, glutathione redox reactions I |
-0.73 | 0.47 | -0.45 | ||
122 | C0144 | Maltose | D-Maltose | α-Maltose | starch degradation II | -0.63 | 0.44 | -0.47 | ||
123 | C0139 | Linoleic acid | n-cis,cis-9,12-Octadecadienoic acid | Linoleate | poly-hydroxy fatty acids biosynthesis, traumatin and (Z)-3-hexen-1-yl acetate biosynthesis, crepenynic acid biosynthesis |
-0.63 | 0.32 | -0.31 |