AT1G09430 : ATP-citrate lyase A-3
Query Information
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AGICode AT1G09430
Description ATP-citrate lyase A-3
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G09430 ATP-citrate lyase A-3 ATP-citrate lyase A-3 1 0.3 -0.3
2 AT3G02150 plastid transcription factor 1 plastid transcription factor 1,
TEOSINTE BRANCHED1, CYCLOIDEA AND
PCF TRANSCRIPTION FACTOR 13, TFPD		 0.88 0.31 -0.32
3 AT4G20330 Transcription initiation factor TFIIE, beta subunit 0.86 0.34 -0.34
4 AT4G13360 ATP-dependent caseinolytic (Clp) protease/crotonase family
protein		 0.86 0.31 -0.3
5 AT1G16180 Serinc-domain containing serine and sphingolipid
biosynthesis protein		 0.85 0.32 -0.3
6 AT1G23440 Peptidase C15, pyroglutamyl peptidase I-like 0.85 0.31 -0.29
7 AT2G33150 peroxisomal 3-ketoacyl-CoA thiolase 3 3-KETOACYL-COA THIOLASE 2,
PEROXISOME DEFECTIVE 1,
peroxisomal 3-ketoacyl-CoA
thiolase 3		 0.85 0.29 -0.32
8 AT4G35830 aconitase 1 aconitase 1 0.84 0.29 -0.32
9 AT3G01970 WRKY DNA-binding protein 45 WRKY DNA-BINDING PROTEIN 45, WRKY
DNA-binding protein 45		 0.84 0.31 -0.3
10 AT1G60420 DC1 domain-containing protein 0.84 0.31 -0.3
11 AT1G27530 CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating
enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-fold
modifier-conjugating enzyme 1 (InterPro:IPR014806); Has 269
Blast hits to 269 proteins in 110 species: Archae - 0;
Bacteria - 0; Metazoa - 175; Fungi - 0; Plants - 42;
Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink).		 0.84 0.32 -0.32
12 AT1G69410 eukaryotic elongation factor 5A-3 EUKARYOTIC ELONGATION FACTOR 5A-3,
eukaryotic elongation factor 5A-3		 0.84 0.29 -0.32
13 AT2G23090 Uncharacterised protein family SERF 0.84 0.31 -0.33
14 AT1G32790 CTC-interacting domain 11 CTC-interacting domain 11 0.84 0.32 -0.3
15 AT3G45310 Cysteine proteinases superfamily protein 0.83 0.33 -0.32
16 AT1G77710 CONTAINS InterPro DOMAIN/s: Ubiquitin-like, Ufm1
(InterPro:IPR005375); Has 244 Blast hits to 244 proteins in
106 species: Archae - 0; Bacteria - 0; Metazoa - 149; Fungi
- 0; Plants - 47; Viruses - 0; Other Eukaryotes - 48
(source: NCBI BLink).		 0.83 0.32 -0.32
17 AT2G35010 thioredoxin O1 thioredoxin O1, thioredoxin O1 0.83 0.32 -0.33
18 AT4G17830 Peptidase M20/M25/M40 family protein 0.83 0.29 -0.32
19 AT3G12800 short-chain dehydrogenase-reductase B DECR, short-chain
dehydrogenase-reductase B		 0.83 0.32 -0.33
20 AT3G48890 membrane-associated progesterone binding protein 3 ARABIDOPSIS THALIANA
MEMBRANE-ASSOCIATED PROGESTERONE
BINDING PROTEIN 3, ATMP2,
membrane-associated progesterone
binding protein 3, MEMBRANE
STEROID BINDING PROTEIN 2		 0.83 0.31 -0.31
21 AT5G07470 peptidemethionine sulfoxide reductase 3 ARABIDOPSIS THALIANA METHIONINE
SULFOXIDE REDUCTASE 3,
peptidemethionine sulfoxide
reductase 3		 0.83 0.3 -0.33
22 AT2G41820 Leucine-rich repeat protein kinase family protein -0.83 0.32 -0.31
23 AT5G56150 ubiquitin-conjugating enzyme 30 ubiquitin-conjugating enzyme 30 0.83 0.32 -0.29
24 AT1G15670 Galactose oxidase/kelch repeat superfamily protein 0.83 0.33 -0.32
25 AT2G39780 ribonuclease 2 ribonuclease 2 0.83 0.31 -0.29
26 AT3G58730 vacuolar ATP synthase subunit D (VATD) / V-ATPase D subunit
/ vacuolar proton pump D subunit (VATPD)		 0.82 0.33 -0.32
27 AT4G02370 Protein of unknown function, DUF538 0.82 0.3 -0.32
28 AT5G61640 peptidemethionine sulfoxide reductase 1 ARABIDOPSIS THALIANA METHIONINE
SULFOXIDE REDUCTASE A1,
peptidemethionine sulfoxide
reductase 1		 0.82 0.33 -0.3
29 AT2G34680 Outer arm dynein light chain 1 protein AUXIN-INDUCED IN ROOT CULTURES 9 -0.82 0.31 -0.33
30 AT5G47890 NADH-ubiquinone oxidoreductase B8 subunit, putative 0.82 0.31 -0.31
31 AT1G72680 cinnamyl-alcohol dehydrogenase CINNAMYL ALCOHOL DEHYDROGENASE 1,
cinnamyl-alcohol dehydrogenase		 0.82 0.33 -0.3
32 AT3G54300 vesicle-associated membrane protein 727 vesicle-associated membrane
protein 727, VAMP727,
vesicle-associated membrane
protein 727		 0.82 0.3 -0.31
33 AT3G03990 alpha/beta-Hydrolases superfamily protein 0.82 0.33 -0.31
34 AT2G40800 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G56430.1); Has 43 Blast hits
to 43 proteins in 15 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).		 0.82 0.32 -0.3
35 AT3G60130 beta glucosidase 16 beta glucosidase 16 0.82 0.32 -0.32
36 AT5G60620 glycerol-3-phosphate acyltransferase 9 glycerol-3-phosphate
acyltransferase 9		 0.81 0.32 -0.32
37 AT5G56180 actin-related protein 8 ARP8, actin-related protein 8,
actin-related protein 8		 0.81 0.3 -0.32
38 AT3G17710 F-box and associated interaction domains-containing protein 0.81 0.3 -0.32
39 AT5G11520 aspartate aminotransferase 3 aspartate aminotransferase 3,
YELLOW-LEAF-SPECIFIC GENE 4		 0.81 0.31 -0.3
40 AT5G42980 thioredoxin 3 thioredoxin H-type 3, thioredoxin
3, ATTRXH3, thioredoxin 3,
THIOREDOXIN H3		 0.81 0.32 -0.33
41 AT1G30600 Subtilase family protein -0.81 0.33 -0.31
42 AT3G51840 acyl-CoA oxidase 4 acyl-CoA oxidase 4, ATG6, ATSCX 0.81 0.32 -0.3
43 AT5G42300 ubiquitin-like protein 5 ubiquitin-like protein 5 0.81 0.33 -0.33
44 AT3G53780 RHOMBOID-like protein 4 RHOMBOID-like protein 4,
RHOMBOID-like protein 4		 0.8 0.31 -0.33
45 AT4G29160 SNF7 family protein SNF7.1 0.8 0.3 -0.33
46 AT2G28120 Major facilitator superfamily protein 0.8 0.33 -0.32
47 AT2G42790 citrate synthase 3 citrate synthase 3 0.8 0.3 -0.31
48 AT5G12210 RAB geranylgeranyl transferase beta subunit 1 RAB geranylgeranyl transferase
beta subunit 1, RAB geranylgeranyl
transferase beta subunit 1		 0.8 0.3 -0.33
49 AT3G10920 manganese superoxide dismutase 1 ARABIDOPSIS MANGANESE SUPEROXIDE
DISMUTASE 1, MATERNAL EFFECT
EMBRYO ARREST 33, manganese
superoxide dismutase 1		 0.8 0.33 -0.32
50 AT1G79590 syntaxin of plants 52 ATSYP52, syntaxin of plants 52 0.8 0.32 -0.32
51 AT3G12490 cystatin B ARABIDOPSIS THALIANA PHYTOCYSTATIN
6, cystatin B, cystatin B		 0.8 0.31 -0.32
52 AT5G59890 actin depolymerizing factor 4 actin depolymerizing factor 4,
ATADF4		 0.8 0.31 -0.31
53 AT1G49670 ARP protein (REF) NQR 0.79 0.31 -0.31
54 AT5G48360 Actin-binding FH2 (formin homology 2) family protein -0.79 0.31 -0.31
55 AT5G25590 Protein of unknown function (DUF630 and DUF632) -0.79 0.32 -0.31
56 AT2G22780 peroxisomal NAD-malate dehydrogenase 1 peroxisomal NAD-malate
dehydrogenase 1		 0.79 0.32 -0.31
57 AT3G17810 pyrimidine 1 pyrimidine 1 0.79 0.33 -0.33
58 AT1G66250 O-Glycosyl hydrolases family 17 protein -0.79 0.33 -0.34
59 AT3G43520 Transmembrane proteins 14C 0.79 0.29 -0.32
60 AT2G40960 Single-stranded nucleic acid binding R3H protein -0.79 0.33 -0.3
61 AT2G27040 Argonaute family protein ARGONAUTE 4, OVEREXPRESSOR OF
CATIONIC PEROXIDASE 11		 -0.79 0.31 -0.33
62 AT3G23605 Ubiquitin-like superfamily protein 0.79 0.32 -0.3
63 AT2G16710 Iron-sulphur cluster biosynthesis family protein 0.79 0.29 -0.31
64 AT1G03950 vacuolar protein sorting-associated protein 2.3 vacuolar protein
sorting-associated protein 2.3		 0.79 0.33 -0.31
65 AT2G36330 Uncharacterised protein family (UPF0497) 0.79 0.29 -0.32
66 AT4G35360 Uncharacterised conserved protein (UCP030210) 0.78 0.33 -0.29
67 AT3G17840 receptor-like kinase 902 receptor-like kinase 902 -0.78 0.31 -0.32
68 AT1G10700 phosphoribosyl pyrophosphate (PRPP) synthase 3 phosphoribosyl pyrophosphate
(PRPP) synthase 3		 0.78 0.3 -0.3
69 AT3G62580 Late embryogenesis abundant protein (LEA) family protein 0.78 0.32 -0.33
70 AT4G02860 Phenazine biosynthesis PhzC/PhzF protein 0.78 0.34 -0.31
71 AT4G34180 Cyclase family protein 0.78 0.33 -0.3
72 AT1G72800 RNA-binding (RRM/RBD/RNP motifs) family protein 0.78 0.33 -0.33
73 AT3G15290 3-hydroxyacyl-CoA dehydrogenase family protein 0.78 0.33 -0.33
74 AT5G17650 glycine/proline-rich protein 0.78 0.31 -0.31
75 AT3G20010 SNF2 domain-containing protein / helicase domain-containing
protein / zinc finger protein-related		 -0.78 0.33 -0.31
76 AT4G29490 Metallopeptidase M24 family protein 0.78 0.3 -0.33
77 AT4G36760 aminopeptidase P1 aminopeptidase P1, ARABIDOPSIS
THALIANA AMINOPEPTIDASE P1		 0.78 0.3 -0.32
78 AT5G11770 NADH-ubiquinone oxidoreductase 20 kDa subunit,
mitochondrial		 0.78 0.31 -0.33
79 AT3G22780 Tesmin/TSO1-like CXC domain-containing protein ATTSO1, CHINESE FOR 'UGLY' -0.78 0.33 -0.32
80 AT4G38360 Protein of unknown function (DUF300) LAZARUS 1 0.78 0.33 -0.32
81 AT2G17760 Eukaryotic aspartyl protease family protein 0.78 0.33 -0.3
82 AT1G06200 Peptidase S24/S26A/S26B/S26C family protein 0.77 0.31 -0.28
83 AT3G30775 Methylenetetrahydrofolate reductase family protein AT-POX, ATPDH, ARABIDOPSIS
THALIANA PROLINE OXIDASE, EARLY
RESPONSIVE TO DEHYDRATION 5,
proline dehydrogenase 1, PRO1,
PROLINE DEHYDROGENASE		 0.77 0.34 -0.32
84 AT5G43940 GroES-like zinc-binding dehydrogenase family protein ALCOHOL DEHYDROGENASE 2, ATGSNOR1,
S-NITROSOGLUTATHIONE REDUCTASE,
sensitive to hot temperatures 5,
PARAQUAT RESISTANT 2		 0.77 0.33 -0.32
85 AT1G06400 Ras-related small GTP-binding family protein ARA-2, ARA2, ATRAB11E, ARABIDOPSIS
THALIANA RAB GTPASE HOMOLOG A1A		 0.77 0.31 -0.3
86 AT3G18630 uracil dna glycosylase uracil dna glycosylase, uracil dna
glycosylase		 -0.77 0.33 -0.3
87 AT2G25610 ATPase, F0/V0 complex, subunit C protein 0.77 0.31 -0.32
88 AT5G07220 BCL-2-associated athanogene 3 BCL-2-associated athanogene 3,
BCL-2-associated athanogene 3		 0.77 0.33 -0.3
89 AT5G04750 F1F0-ATPase inhibitor protein, putative 0.77 0.31 -0.31
90 AT1G26550 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.77 0.29 -0.3
91 AT1G30090 Galactose oxidase/kelch repeat superfamily protein 0.77 0.32 -0.34
92 AT4G32040 KNOTTED1-like homeobox gene 5 KNOTTED1-like homeobox gene 5 0.77 0.31 -0.31
93 AT2G43820 UDP-glucosyltransferase 74F2 Arabidopsis thaliana salicylic
acid glucosyltransferase 1, GT,
salicylic acid glucosyltransferase
1, UDP-glucose:salicylic acid
glucosyltransferase 1,
UDP-glucosyltransferase 74F2		 0.77 0.31 -0.33
94 AT3G51480 glutamate receptor 3.6 glutamate receptor 3.6, GLR3.6,
glutamate receptor 3.6		 -0.77 0.33 -0.31
95 AT3G10310 P-loop nucleoside triphosphate hydrolases superfamily
protein with CH (Calponin Homology) domain		 -0.76 0.32 -0.32
96 AT1G10850 Leucine-rich repeat protein kinase family protein -0.76 0.31 -0.3
97 AT4G14200 Pentatricopeptide repeat (PPR) superfamily protein -0.76 0.32 -0.32
98 AT5G48310 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G24610.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.76 0.3 -0.31
99 AT3G19570 Family of unknown function (DUF566) QWRF domain containing 1, SNOWY
COTYLEDON 3		 -0.76 0.3 -0.32
100 AT5G10800 RNA recognition motif (RRM)-containing protein -0.76 0.31 -0.33
101 AT1G69420 DHHC-type zinc finger family protein -0.76 0.31 -0.29
102 AT2G22670 indoleacetic acid-induced protein 8 indoleacetic acid-induced protein
8		 -0.75 0.32 -0.33
103 AT2G29890 villin-like 1 ATVLN1, villin 1 -0.75 0.31 -0.3
104 AT1G02730 cellulose synthase-like D5 cellulose synthase-like D5,
CELLULOSE SYNTHASE LIKE D5,
cellulose synthase-like D5, SALT
OVERLY SENSITIVE 6		 -0.75 0.31 -0.32
105 AT1G77110 Auxin efflux carrier family protein PIN-FORMED 6 -0.75 0.3 -0.31
106 AT3G56870 unknown protein; Has 204 Blast hits to 201 proteins in 58
species: Archae - 0; Bacteria - 10; Metazoa - 72; Fungi -
8; Plants - 41; Viruses - 0; Other Eukaryotes - 73 (source:
NCBI BLink).		 -0.74 0.33 -0.32
107 AT4G26760 microtubule-associated protein 65-2 microtubule-associated protein
65-2		 -0.74 0.31 -0.32
108 AT5G13290 Protein kinase superfamily protein CORYNE, SUPPRESSOR OF LLP1 2 -0.74 0.34 -0.31
109 AT5G06940 Leucine-rich repeat receptor-like protein kinase family
protein		 -0.74 0.31 -0.3
110 AT5G07810 SNF2 domain-containing protein / helicase domain-containing
protein / HNH endonuclease domain-containing protein		 -0.74 0.34 -0.31
111 AT3G23890 topoisomerase II ATTOPII, topoisomerase II -0.74 0.32 -0.32
112 AT1G18250 Pathogenesis-related thaumatin superfamily protein ATLP-1 -0.73 0.34 -0.3
113 AT5G65700 Leucine-rich receptor-like protein kinase family protein BARELY ANY MERISTEM 1 -0.73 0.31 -0.32
114 AT1G50240 Protein kinase family protein with ARM repeat domain FUSED -0.73 0.33 -0.31
115 AT1G73020 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF590 (InterPro:IPR007632); Has 1198
Blast hits to 1128 proteins in 154 species: Archae - 0;
Bacteria - 0; Metazoa - 809; Fungi - 158; Plants - 25;
Viruses - 0; Other Eukaryotes - 206 (source: NCBI BLink).		 -0.73 0.31 -0.32
116 AT3G56480 myosin heavy chain-related -0.73 0.31 -0.34
117 AT5G11510 myb domain protein 3r-4 myb domain protein 3R4, myb domain
protein 3r-4		 -0.73 0.31 -0.31
118 AT4G24790 AAA-type ATPase family protein -0.72 0.33 -0.31
119 AT4G09970 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 18
plant structures; EXPRESSED DURING: 13 growth stages; Has
15 Blast hits to 15 proteins in 6 species: Archae - 0;
Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 13; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.72 0.32 -0.31
120 AT2G24230 Leucine-rich repeat protein kinase family protein -0.72 0.33 -0.32
121 AT3G22790 Kinase interacting (KIP1-like) family protein -0.72 0.32 -0.33
122 AT5G43020 Leucine-rich repeat protein kinase family protein -0.72 0.31 -0.32
123 AT5G04810 pentatricopeptide (PPR) repeat-containing protein -0.72 0.32 -0.32
124 AT5G65460 kinesin like protein for actin based chloroplast movement 2 kinesin like protein for actin
based chloroplast movement 2,
kinesin CDKA ;1 associated 2		 -0.71 0.3 -0.31
125 AT4G29080 phytochrome-associated protein 2 indole-3-acetic acid inducible 27,
phytochrome-associated protein 2		 -0.71 0.32 -0.31
126 AT4G02680 ETO1-like 1 ETO1-like 1 -0.71 0.31 -0.31
127 AT1G11280 S-locus lectin protein kinase family protein -0.71 0.29 -0.3
128 AT4G26660 INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED
DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s:
Kinesin-related protein (InterPro:IPR010544); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G55520.2); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.71 0.32 -0.32
129 AT1G18370 ATP binding microtubule motor family protein ARABIDOPSIS NPK1-ACTIVATING
KINESIN 1, HINKEL, NPK1-ACTIVATING
KINESIN 1		 -0.71 0.3 -0.32
130 AT3G01500 carbonic anhydrase 1 BETA CARBONIC ANHYDRASE 1,
ARABIDOPSIS THALIANA SALICYLIC
ACID-BINDING PROTEIN 3, carbonic
anhydrase 1, SALICYLIC
ACID-BINDING PROTEIN 3		 -0.71 0.32 -0.35
131 AT1G70940 Auxin efflux carrier family protein ARABIDOPSIS PIN-FORMED 3,
PIN-FORMED 3		 -0.71 0.31 -0.32
132 AT2G41890 curculin-like (mannose-binding) lectin family protein / PAN
domain-containing protein		 -0.71 0.3 -0.29
133 AT4G30020 PA-domain containing subtilase family protein -0.7 0.29 -0.32
134 AT5G37020 auxin response factor 8 auxin response factor 8, ATARF8 -0.7 0.3 -0.32
135 AT5G06710 homeobox from Arabidopsis thaliana homeobox from Arabidopsis thaliana -0.7 0.32 -0.33
136 AT2G32010 CVP2 like 1 CVP2 like 1 -0.7 0.32 -0.3
137 AT1G63480 AT hook motif DNA-binding family protein -0.7 0.32 -0.32
138 AT5G54670 kinesin 3 kinesin 3, KINESIN-LIKE PROTEIN IN
ARABIDOPSIS THALIANA C		 -0.7 0.31 -0.33
139 AT4G16340 guanyl-nucleotide exchange factors;GTPase binding;GTP
binding		 SPIKE1 -0.69 0.31 -0.33
140 AT4G20430 Subtilase family protein -0.69 0.29 -0.31
141 AT5G20540 BREVIS RADIX-like 4 BREVIS RADIX-like 4, BRX-LIKE4,
BREVIS RADIX-like 4		 -0.69 0.3 -0.3
142 AT2G44830 Protein kinase superfamily protein -0.69 0.31 -0.33
143 AT1G55540 Nuclear pore complex protein -0.69 0.31 -0.31
144 AT3G50240 ATP binding microtubule motor family protein KICP-02 -0.69 0.3 -0.3
145 AT5G60150 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.69 0.31 -0.32
146 AT1G63300 Myosin heavy chain-related protein -0.69 0.3 -0.3
147 AT5G55340 MBOAT (membrane bound O-acyl transferase) family protein -0.69 0.33 -0.32
148 AT1G59540 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ZCF125 -0.69 0.32 -0.34