AT1G09520 : -
Query Information
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AGICode AT1G09520
Description LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786); BEST Arabidopsis thaliana protein match is: PHD finger family protein (TAIR:AT3G17460.1); Has 56 Blast hits to 56 proteins in 17 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 4; Plants - 46; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G09520 LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 12 growth stages; CONTAINS InterPro
DOMAIN/s: Zinc finger, PHD-type, conserved site
(InterPro:IPR019786); BEST Arabidopsis thaliana protein
match is: PHD finger family protein (TAIR:AT3G17460.1); Has
56 Blast hits to 56 proteins in 17 species: Archae - 0;
Bacteria - 2; Metazoa - 0; Fungi - 4; Plants - 46; Viruses
- 0; Other Eukaryotes - 4 (source: NCBI BLink).		 1 0.33 -0.32
2 AT2G32990 glycosyl hydrolase 9B8 glycosyl hydrolase 9B8, glycosyl
hydrolase 9B8		 -0.75 0.33 -0.33
3 AT3G25585 aminoalcoholphosphotransferase aminoalcoholphosphotransferase,
ATAAPT2		 -0.71 0.32 -0.3
4 AT3G49845 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: root; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 WINDHOSE 3 -0.71 0.33 -0.34
5 AT4G12410 SAUR-like auxin-responsive protein family 0.7 0.33 -0.34
6 AT5G51030 NAD(P)-binding Rossmann-fold superfamily protein -0.7 0.31 -0.32
7 AT1G09530 phytochrome interacting factor 3 PHYTOCHROME-ASSOCIATED PROTEIN 3,
phytochrome interacting factor 3,
PHOTOCURRENT 1		 0.7 0.31 -0.34
8 AT3G15355 ubiquitin-conjugating enzyme 25 PHO2 FAMILY UBIQUITIN CONJUGATION
ENZYME 1, ubiquitin-conjugating
enzyme 25		 0.69 0.32 -0.32
9 AT5G22500 fatty acid reductase 1 fatty acid reductase 1 0.69 0.32 -0.32
10 AT2G47780 Rubber elongation factor protein (REF) 0.69 0.33 -0.32
11 AT5G60660 plasma membrane intrinsic protein 2;4 plasma membrane intrinsic protein
2;4, PIP2F		 -0.68 0.32 -0.31
12 AT3G60850 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 11 growth stages; Has 42
Blast hits to 42 proteins in 12 species: Archae - 0;
Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 37; Viruses
- 0; Other Eukaryotes - 1 (source: NCBI BLink).		 0.68 0.33 -0.31
13 AT3G53540 unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN:
24 plant structures; EXPRESSED DURING: 14 growth stages;
CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF3741 (InterPro:IPR022212); BEST Arabidopsis thaliana
protein match is: Protein of unknown function (DUF3741)
(TAIR:AT4G28760.2); Has 1710 Blast hits to 868 proteins in
206 species: Archae - 2; Bacteria - 409; Metazoa - 304;
Fungi - 204; Plants - 304; Viruses - 2; Other Eukaryotes -
485 (source: NCBI BLink).		 0.68 0.31 -0.31
14 AT4G26320 arabinogalactan protein 13 arabinogalactan protein 13 -0.68 0.31 -0.3
15 AT2G21650 Homeodomain-like superfamily protein ARABIDOPSIS RAD-LIKE 2, MATERNAL
EFFECT EMBRYO ARREST 3,
RADIALIS-LIKE SANT/MYB 1		 -0.68 0.34 -0.31
16 AT5G36140 cytochrome P450, family 716, subfamily A, polypeptide 2 cytochrome P450, family 716,
subfamily A, polypeptide 2		 -0.68 0.31 -0.31
17 AT5G66815 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: root; Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.68 0.34 -0.34
18 AT1G76340 golgi nucleotide sugar transporter 3 golgi nucleotide sugar transporter
3		 -0.67 0.29 -0.32
19 AT5G60680 Protein of unknown function, DUF584 0.67 0.31 -0.31
20 AT2G04240 RING/U-box superfamily protein XERICO 0.67 0.33 -0.31
21 AT3G01260 Galactose mutarotase-like superfamily protein -0.67 0.3 -0.3
22 AT3G24210 Ankyrin repeat family protein -0.67 0.32 -0.33
23 AT2G46800 zinc transporter of Arabidopsis thaliana A. THALIANA CATION DIFFUSION
FACILITATOR 1, ATMTP1, MTP1, zinc
transporter of Arabidopsis
thaliana, ZINC TRANSPORTER OF
ARABIDOPSIS THALIANA 1		 0.67 0.34 -0.34
24 AT3G25655 inflorescence deficient in abscission (IDA)-like 1 inflorescence deficient in
abscission (IDA)-like 1		 -0.66 0.32 -0.32
25 AT2G35770 serine carboxypeptidase-like 28 serine carboxypeptidase-like 28 -0.66 0.32 -0.31
26 AT1G08630 threonine aldolase 1 threonine aldolase 1 0.66 0.3 -0.31
27 AT3G30370 CONTAINS InterPro DOMAIN/s: Transposase, MuDR, plant
(InterPro:IPR004332); BEST Arabidopsis thaliana protein
match is: SWAP (Suppressor-of-White-APricot)/surp
RNA-binding domain-containing protein (TAIR:AT1G18050.1);
Has 35 Blast hits to 35 proteins in 4 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.65 0.32 -0.3
28 AT3G59940 Galactose oxidase/kelch repeat superfamily protein 0.65 0.32 -0.31
29 AT2G26070 Protein of unknown function (DUF778) REVERSION-TO-ETHYLENE SENSITIVITY1 0.65 0.31 -0.33
30 AT1G18140 laccase 1 ATLAC1, laccase 1 -0.65 0.3 -0.31
31 AT3G50980 dehydrin xero 1 dehydrin xero 1 0.65 0.32 -0.35
32 AT1G28330 dormancy-associated protein-like 1 DORMANCY-ASSOCIATED PROTEIN 1,
dormancy-associated protein-like 1		 0.65 0.31 -0.31
33 AT2G40160 Plant protein of unknown function (DUF828) TBL30 -0.65 0.31 -0.31
34 AT1G77690 like AUX1 3 like AUX1 3 -0.65 0.31 -0.31
35 AT4G28240 Wound-responsive family protein 0.65 0.31 -0.34
36 AT2G39400 alpha/beta-Hydrolases superfamily protein 0.65 0.33 -0.34
37 AT4G09630 Protein of unknown function (DUF616) -0.65 0.33 -0.31
38 AT5G23840 MD-2-related lipid recognition domain-containing protein -0.65 0.3 -0.3
39 AT1G71740 unknown protein; Has 82 Blast hits to 82 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.64 0.32 -0.32
40 AT3G59370 Vacuolar calcium-binding protein-related -0.64 0.32 -0.33
41 AT1G67100 LOB domain-containing protein 40 LOB domain-containing protein 40 0.64 0.29 -0.31
42 AT2G38650 galacturonosyltransferase 7 galacturonosyltransferase 7, LIKE
GLYCOSYL TRANSFERASE 7		 -0.64 0.31 -0.31
43 AT2G40815 Calcium-dependent lipid-binding (CaLB domain) family
protein		 0.64 0.29 -0.32
44 AT2G41060 RNA-binding (RRM/RBD/RNP motifs) family protein -0.64 0.31 -0.3
45 AT1G09660 RNA-binding KH domain-containing protein -0.63 0.32 -0.31
46 AT5G40450 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, plasma membrane; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 13 growth stages; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.63 0.32 -0.32
47 AT1G14960 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.63 0.3 -0.32
48 AT1G76240 Arabidopsis protein of unknown function (DUF241) -0.63 0.3 -0.33
49 AT3G49710 Pentatricopeptide repeat (PPR) superfamily protein -0.63 0.32 -0.31
50 AT1G76120 Pseudouridine synthase family protein -0.63 0.34 -0.31
51 AT1G72760 Protein kinase superfamily protein 0.63 0.31 -0.32
52 AT1G03410 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 2A6 -0.63 0.31 -0.32
53 AT1G64590 NAD(P)-binding Rossmann-fold superfamily protein -0.63 0.32 -0.31
54 AT1G71980 Protease-associated (PA) RING/U-box zinc finger family
protein		 0.63 0.31 -0.32
55 AT1G52360 Coatomer, beta' subunit -0.63 0.32 -0.3
56 AT5G47390 myb-like transcription factor family protein 0.63 0.31 -0.31
57 AT1G65360 AGAMOUS-like 23 AGAMOUS-like 23 -0.63 0.31 -0.33
58 AT5G62330 BEST Arabidopsis thaliana protein match is: Plant
invertase/pectin methylesterase inhibitor superfamily
protein (TAIR:AT5G62340.1); Has 9 Blast hits to 9 proteins
in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.62 0.31 -0.31
59 AT1G56100 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.62 0.31 -0.31
60 AT5G57450 homolog of X-ray repair cross complementing 3 (XRCC3) ARABIDOPSIS THALIANA HOMOLOG OF
X-RAY REPAIR CROSS COMPLEMENTING 3
(XRCC3), homolog of X-ray repair
cross complementing 3 (XRCC3)		 -0.62 0.31 -0.31
61 AT2G27370 Uncharacterised protein family (UPF0497) Casparian strip membrane domain
protein 3		 -0.62 0.3 -0.31
62 AT5G27320 alpha/beta-Hydrolases superfamily protein ATGID1C, GA INSENSITIVE DWARF1C 0.62 0.33 -0.32
63 AT5G03770 KDO transferase A AtKdtA, KDO transferase A 0.62 0.3 -0.32
64 AT5G09900 26S proteasome regulatory subunit, putative (RPN5) EMBRYO DEFECTIVE 2107, MARIPOSA,
REGULATORY PARTICLE NON-ATPASE
SUBUNIT 5A		 -0.62 0.3 -0.31
65 AT1G47340 F-box and associated interaction domains-containing protein 0.62 0.3 -0.3
66 AT1G74770 zinc ion binding -0.62 0.33 -0.31
67 AT3G27090 DCD (Development and Cell Death) domain protein 0.62 0.32 -0.31
68 AT3G03810 O-fucosyltransferase family protein embryo sac development arrest 30 -0.62 0.31 -0.31
69 AT5G43550 F-box associated ubiquitination effector family protein -0.62 0.32 -0.3
70 AT1G03520 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 0.62 0.31 -0.31
71 AT1G68650 Uncharacterized protein family (UPF0016) -0.62 0.31 -0.3
72 AT2G28670 Disease resistance-responsive (dirigent-like protein)
family protein		 ENHANCED SUBERIN 1 -0.62 0.3 -0.31
73 AT4G35370 Transducin/WD40 repeat-like superfamily protein -0.61 0.31 -0.31
74 AT1G14890 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.61 0.3 -0.28
75 AT3G09090 defective in exine formation protein (DEX1) DEFECTIVE IN EXINE FORMATION 1 -0.61 0.34 -0.31
76 AT1G23160 Auxin-responsive GH3 family protein -0.61 0.33 -0.3
77 AT4G03510 RING membrane-anchor 1 ATRMA1, RING membrane-anchor 1 0.61 0.3 -0.32
78 AT5G62470 myb domain protein 96 MYB DOMAIN PROTEIN 96, myb domain
protein 96, MYBCOV1		 0.61 0.31 -0.3
79 AT1G53170 ethylene response factor 8 ATERF-8, ETHYLENE RESPONSE ELEMENT
BINDING FACTOR 4, ethylene
response factor 8		 0.61 0.29 -0.3
80 AT4G29190 Zinc finger C-x8-C-x5-C-x3-H type family protein Arabidopsis thaliana
oxidation-related zinc finger 2,
oxidation-related zinc finger 2		 0.61 0.32 -0.31
81 AT3G62800 double-stranded-RNA-binding protein 4 double-stranded-RNA-binding
protein 4		 0.6 0.35 -0.32
82 AT4G15010 Mitochondrial substrate carrier family protein -0.6 0.31 -0.29
83 AT4G20390 Uncharacterised protein family (UPF0497) -0.6 0.32 -0.31
84 AT4G36150 Disease resistance protein (TIR-NBS-LRR class) family 0.6 0.29 -0.32
85 AT2G20070 FUNCTIONS IN: molecular_function unknown; LOCATED IN:
endomembrane system; BEST Arabidopsis thaliana protein
match is: low-molecular-weight cysteine-rich 81
(TAIR:AT2G25295.1); Has 10 Blast hits to 10 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 10; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.6 0.3 -0.33
86 AT1G29240 Protein of unknown function (DUF688) 0.6 0.31 -0.3
87 AT4G13440 Calcium-binding EF-hand family protein -0.6 0.31 -0.33
88 AT1G48320 Thioesterase superfamily protein 0.6 0.3 -0.31
89 AT2G42250 cytochrome P450, family 712, subfamily A, polypeptide 1 cytochrome P450, family 712,
subfamily A, polypeptide 1		 -0.6 0.32 -0.3
90 AT2G24530 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G31440.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.6 0.32 -0.32
91 AT4G05200 cysteine-rich RLK (RECEPTOR-like protein kinase) 25 cysteine-rich RLK (RECEPTOR-like
protein kinase) 25		 -0.6 0.33 -0.3
92 AT5G10550 global transcription factor group E2 global transcription factor group
E2		 0.6 0.32 -0.32
93 AT3G03980 NAD(P)-binding Rossmann-fold superfamily protein 0.6 0.31 -0.31
94 AT2G06020 Homeodomain-like superfamily protein 0.6 0.32 -0.3
95 AT3G44330 INVOLVED IN: protein processing; LOCATED IN: mitochondrion,
endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED
IN: 25 plant structures; EXPRESSED DURING: 13 growth
stages; CONTAINS InterPro DOMAIN/s: Nicalin
(InterPro:IPR016574), EF-Hand 1, calcium-binding site
(InterPro:IPR018247), Nicastrin (InterPro:IPR008710); Has
245 Blast hits to 243 proteins in 99 species: Archae - 6;
Bacteria - 10; Metazoa - 139; Fungi - 0; Plants - 46;
Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).		 -0.6 0.31 -0.31
96 AT1G43760 DNAse I-like superfamily protein -0.6 0.32 -0.31
97 AT4G38390 root hair specific 17 root hair specific 17 -0.6 0.32 -0.31
98 AT1G78815 Protein of unknown function (DUF640) LIGHT SENSITIVE HYPOCOTYLS 7 -0.6 0.33 -0.3
99 AT5G49700 Predicted AT-hook DNA-binding family protein 0.6 0.33 -0.31
100 AT2G33410 RNA-binding (RRM/RBD/RNP motifs) family protein -0.6 0.3 -0.33
101 AT2G42620 RNI-like superfamily protein MORE AXILLARY BRANCHES 2, ORESARA
9, PLEIOTROPIC PHOTOSIGNALING		 0.59 0.33 -0.31
102 AT1G66030 cytochrome P450, family 96, subfamily A, polypeptide 14
pseudogene		 cytochrome P450, family 96,
subfamily A, polypeptide 14
pseudogene		 -0.59 0.31 -0.32
103 AT2G43670 Carbohydrate-binding X8 domain superfamily protein -0.59 0.33 -0.34
104 AT3G27960 Tetratricopeptide repeat (TPR)-like superfamily protein -0.59 0.34 -0.31
105 AT5G25190 Integrase-type DNA-binding superfamily protein ethylene and salt inducible 3 0.59 0.3 -0.32
106 AT2G44480 beta glucosidase 17 beta glucosidase 17 0.59 0.32 -0.32
107 AT5G45070 phloem protein 2-A8 phloem protein 2-A8, phloem
protein 2-A8		 -0.59 0.3 -0.33
108 AT3G04220 Disease resistance protein (TIR-NBS-LRR class) family -0.59 0.3 -0.31
109 AT5G14670 ADP-ribosylation factor A1B ADP-ribosylation factor A1B,
ADP-ribosylation factor A1B		 -0.59 0.31 -0.32
110 AT3G56350 Iron/manganese superoxide dismutase family protein 0.59 0.3 -0.3
111 AT5G41960 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 1807 Blast hits to 1807
proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa
- 736; Fungi - 347; Plants - 385; Viruses - 0; Other
Eukaryotes - 339 (source: NCBI BLink).		 0.59 0.29 -0.31
112 AT3G24810 Cyclin-dependent kinase inhibitor family protein ICK3, kip-related protein 5 -0.59 0.3 -0.32
113 AT1G16060 ARIA-interacting double AP2 domain protein ARIA-interacting double AP2 domain
protein		 -0.59 0.33 -0.31
114 AT1G05520 Sec23/Sec24 protein transport family protein -0.59 0.32 -0.31
115 AT5G27680 RECQ helicase SIM RECQ helicase SIM -0.59 0.31 -0.33
116 AT5G05550 sequence-specific DNA binding transcription factors 0.59 0.32 -0.31
117 AT4G16146 cAMP-regulated phosphoprotein 19-related protein 0.59 0.32 -0.31
118 AT2G29340 NAD-dependent epimerase/dehydratase family protein 0.58 0.31 -0.31
119 AT3G24070 Zinc knuckle (CCHC-type) family protein 0.58 0.31 -0.32
120 AT3G26790 AP2/B3-like transcriptional factor family protein FUSCA 3 0.58 0.28 -0.3
121 AT3G07710 BEST Arabidopsis thaliana protein match is: DNA-binding
storekeeper protein-related transcriptional regulator
(TAIR:AT2G25650.1); Has 38 Blast hits to 38 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.58 0.32 -0.31
122 AT1G50460 hexokinase-like 1 ATHKL1, hexokinase-like 1 -0.58 0.33 -0.34
123 AT2G14630 transposable element gene -0.58 0.33 -0.31
124 AT5G12470 Protein of unknown function (DUF3411) -0.58 0.33 -0.34
125 AT3G51490 tonoplast monosaccharide transporter3 tonoplast monosaccharide
transporter3		 0.58 0.3 -0.3
126 AT4G28830 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.58 0.33 -0.31
127 AT3G50500 SNF1-related protein kinase 2.2 SNF1-RELATED PROTEIN KINASE 2-2,
SNF1-related protein kinase 2.2,
SNF1-RELATED PROTEIN KINASE 2-2,
SRK2D		 0.58 0.31 -0.32
128 AT1G74550 cytochrome P450, family 98, subfamily A, polypeptide 9 cytochrome P450, family 98,
subfamily A, polypeptide 9		 -0.58 0.33 -0.3
129 AT4G00560 NAD(P)-binding Rossmann-fold superfamily protein 0.57 0.3 -0.32
130 AT1G62290 Saposin-like aspartyl protease family protein 0.57 0.29 -0.31
131 AT5G64110 Peroxidase superfamily protein 0.57 0.32 -0.32
132 AT1G54330 NAC domain containing protein 20 NAC domain containing protein 20,
NAC domain containing protein 20		 -0.57 0.33 -0.33
133 AT2G41370 Ankyrin repeat family protein / BTB/POZ domain-containing
protein		 BLADE ON PETIOLE2 -0.57 0.33 -0.33
134 AT3G22400 PLAT/LH2 domain-containing lipoxygenase family protein Arabidopsis thaliana lipoxygenase
5, LOX5		 -0.57 0.31 -0.32
135 AT4G05070 Wound-responsive family protein 0.57 0.33 -0.31
136 AT2G02610 Cysteine/Histidine-rich C1 domain family protein -0.57 0.29 -0.33
137 AT1G57790 F-box family protein 0.56 0.28 -0.31
138 AT2G38530 lipid transfer protein 2 cell growth defect factor-3, LP2,
lipid transfer protein 2		 0.56 0.29 -0.31
139 AT2G05950 transposable element gene 0.56 0.31 -0.32