AGICode | AT1G05360 |
Description | BEST Arabidopsis thaliana protein match is: SNARE associated Golgi protein family (TAIR:AT4G14950.1); Has 332 Blast hits to 326 proteins in 115 species: Archae - 0; Bacteria - 11; Metazoa - 174; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT1G05360 | BEST Arabidopsis thaliana protein match is: SNARE associated Golgi protein family (TAIR:AT4G14950.1); Has 332 Blast hits to 326 proteins in 115 species: Archae - 0; Bacteria - 11; Metazoa - 174; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). |
Killing Me Slowly 2 | 1 | 0.32 | -0.3 | ||
2 | AT3G11690 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06380.1); Has 84 Blast hits to 84 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.74 | 0.32 | -0.31 | |||
3 | AT4G05300 | transposable element gene | -0.68 | 0.31 | -0.32 | |||
4 | AT2G44480 | beta glucosidase 17 | beta glucosidase 17 | -0.66 | 0.32 | -0.31 | ||
5 | AT2G22620 | Rhamnogalacturonate lyase family protein | 0.66 | 0.33 | -0.32 | |||
6 | AT3G43680 | transposable element gene | -0.66 | 0.3 | -0.32 | |||
7 | AT5G20660 | Zn-dependent exopeptidases superfamily protein | -0.65 | 0.32 | -0.3 | |||
8 | AT2G13335 | transposable element gene | -0.63 | 0.32 | -0.32 | |||
9 | AT1G06840 | Leucine-rich repeat protein kinase family protein | -0.61 | 0.32 | -0.3 | |||
10 | AT2G40160 | Plant protein of unknown function (DUF828) | TBL30 | 0.61 | 0.32 | -0.34 | ||
11 | AT1G62530 | Plant protein of unknown function (DUF863) | -0.61 | 0.3 | -0.31 | |||
12 | AT3G47660 | Regulator of chromosome condensation (RCC1) family protein | -0.6 | 0.32 | -0.32 | |||
13 | AT4G23320 | cysteine-rich RLK (RECEPTOR-like protein kinase) 24 | cysteine-rich RLK (RECEPTOR-like protein kinase) 24 |
-0.6 | 0.32 | -0.31 | ||
14 | AT3G12200 | NIMA-related kinase 7 | NIMA-related kinase 7, NIMA-related kinase 7 |
0.6 | 0.31 | -0.34 | ||
15 | AT5G38950 | RmlC-like cupins superfamily protein | 0.6 | 0.3 | -0.33 | |||
16 | AT3G24110 | Calcium-binding EF-hand family protein | 0.59 | 0.31 | -0.33 | |||
17 | AT1G54170 | CTC-interacting domain 3 | CTC-interacting domain 3 | 0.59 | 0.32 | -0.31 | ||
18 | AT1G71980 | Protease-associated (PA) RING/U-box zinc finger family protein |
-0.59 | 0.32 | -0.32 | |||
19 | AT3G18360 | VQ motif-containing protein | -0.59 | 0.33 | -0.31 | |||
20 | AT5G46910 | Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein |
0.59 | 0.3 | -0.31 | |||
21 | AT3G04460 | peroxin-12 | ABERRANT PEROXISOME MORPHOLOGY 4, PEROXIN-12, peroxin-12 |
0.59 | 0.34 | -0.3 | ||
22 | AT3G21860 | SKP1-like 10 | SKP1-like 10, SKP1-like 10 | -0.58 | 0.31 | -0.31 | ||
23 | AT2G18640 | geranylgeranyl pyrophosphate synthase 4 | geranylgeranyl pyrophosphate synthase 4 |
-0.57 | 0.3 | -0.32 | ||
24 | AT5G44550 | Uncharacterised protein family (UPF0497) | 0.57 | 0.3 | -0.32 | |||
25 | AT2G14630 | transposable element gene | 0.57 | 0.33 | -0.32 | |||
26 | AT4G24140 | alpha/beta-Hydrolases superfamily protein | 0.56 | 0.34 | -0.33 | |||
27 | AT5G05980 | DHFS-FPGS homolog B | DHFS-FPGS homolog B, DHFS-FPGS homolog B, folylpolyglutamate synthetase 1 |
0.56 | 0.32 | -0.34 | ||
28 | AT2G10460 | transposable element gene | -0.55 | 0.31 | -0.32 | |||
29 | AT1G67100 | LOB domain-containing protein 40 | LOB domain-containing protein 40 | -0.55 | 0.31 | -0.35 | ||
30 | AT1G34240 | transposable element gene | 0.55 | 0.32 | -0.3 | |||
31 | AT4G32880 | homeobox gene 8 | homeobox gene 8, ATHB8, homeobox gene 8 |
0.55 | 0.3 | -0.32 | ||
32 | AT5G67360 | Subtilase family protein | ARA12 | -0.55 | 0.31 | -0.29 | ||
33 | AT5G62960 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10660.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). |
0.55 | 0.3 | -0.32 | |||
34 | AT5G53240 | Protein of unknown function (DUF295) | -0.55 | 0.32 | -0.31 | |||
35 | AT3G50500 | SNF1-related protein kinase 2.2 | SNF1-RELATED PROTEIN KINASE 2-2, SNF1-related protein kinase 2.2, SNF1-RELATED PROTEIN KINASE 2-2, SRK2D |
-0.55 | 0.31 | -0.31 | ||
36 | AT1G62410 | MIF4G domain-containing protein | -0.55 | 0.31 | -0.32 | |||
37 | AT3G56760 | Protein kinase superfamily protein | 0.55 | 0.31 | -0.32 | |||
38 | AT5G45360 | F-box family protein | -0.54 | 0.32 | -0.34 | |||
39 | AT5G44820 | Nucleotide-diphospho-sugar transferase family protein | -0.54 | 0.31 | -0.33 | |||
40 | AT1G54370 | sodium hydrogen exchanger 5 | NA+/H+ ANTIPORTER 5, sodium hydrogen exchanger 5 |
0.54 | 0.31 | -0.33 | ||
41 | AT5G19710 | BEST Arabidopsis thaliana protein match is: HPT phosphotransmitter 4 (TAIR:AT3G16360.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.54 | 0.31 | -0.29 | |||
42 | AT3G52490 | Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein |
0.54 | 0.3 | -0.32 | |||
43 | AT4G39480 | cytochrome P450, family 96, subfamily A, polypeptide 9 | cytochrome P450, family 96, subfamily A, polypeptide 9 |
-0.53 | 0.33 | -0.35 | ||
44 | AT3G28030 | 5'-3' exonuclease family protein | ULTRAVIOLET HYPERSENSITIVE 3, UV REPAIR DEFECTIVE 1 |
0.53 | 0.3 | -0.32 | ||
45 | AT2G26070 | Protein of unknown function (DUF778) | REVERSION-TO-ETHYLENE SENSITIVITY1 | -0.53 | 0.33 | -0.32 | ||
46 | AT1G55190 | PRA1 (Prenylated rab acceptor) family protein | PRENYLATED RAB ACCEPTOR 1.F2, PRA7 | -0.53 | 0.32 | -0.33 | ||
47 | AT2G04845 | Acyl-CoA N-acyltransferases (NAT) superfamily protein | 0.53 | 0.33 | -0.32 | |||
48 | AT2G23510 | spermidine disinapoyl acyltransferase | spermidine disinapoyl acyltransferase |
0.53 | 0.32 | -0.32 | ||
49 | AT1G14687 | homeobox protein 32 | homeobox protein 32, homeobox protein 32, ZINC FINGER HOMEODOMAIN 14 |
-0.53 | 0.31 | -0.31 | ||
50 | AT4G09290 | transposable element gene | -0.52 | 0.32 | -0.31 | |||
51 | AT4G22100 | beta glucosidase 2 | beta glucosidase 2 | -0.52 | 0.32 | -0.31 | ||
52 | AT3G59440 | Calcium-binding EF-hand family protein | -0.52 | 0.33 | -0.3 | |||
53 | AT1G75140 | unknown protein; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G19370.1); Has 51 Blast hits to 49 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). |
0.52 | 0.33 | -0.32 | |||
54 | AT1G17000 | trehalose-phosphatase/synthase 3 | trehalose-phosphatase/synthase 3, TREHALOSE -6-PHOSPHATASE SYNTHASE S3, trehalose-phosphatase/synthase 3 |
0.52 | 0.31 | -0.29 | ||
55 | AT4G09960 | K-box region and MADS-box transcription factor family protein |
AGAMOUS-like 11, SEEDSTICK | -0.52 | 0.32 | -0.31 | ||
56 | AT5G66340 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.52 | 0.31 | -0.33 | |||
57 | AT2G39180 | CRINKLY4 related 2 | ATCRR2, CRINKLY4 related 2 | -0.52 | 0.32 | -0.31 | ||
58 | AT4G14790 | ATP-dependent RNA helicase, mitochondrial (SUV3) | ATSUV3, embryo sac development arrest 15 |
0.51 | 0.33 | -0.33 | ||
59 | AT1G06550 | ATP-dependent caseinolytic (Clp) protease/crotonase family protein |
0.51 | 0.33 | -0.32 | |||
60 | AT4G14590 | embryo defective 2739 | embryo defective 2739 | -0.51 | 0.32 | -0.33 | ||
61 | AT3G13090 | multidrug resistance-associated protein 8 | ATP-binding cassette C6, multidrug resistance-associated protein 8, multidrug resistance-associated protein 8 |
-0.51 | 0.29 | -0.3 | ||
62 | AT2G20110 | Tesmin/TSO1-like CXC domain-containing protein | -0.51 | 0.28 | -0.3 | |||
63 | AT5G63940 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain |
0.51 | 0.32 | -0.3 | |||
64 | AT5G65830 | receptor like protein 57 | receptor like protein 57, receptor like protein 57 |
-0.5 | 0.33 | -0.3 | ||
65 | AT2G32990 | glycosyl hydrolase 9B8 | glycosyl hydrolase 9B8, glycosyl hydrolase 9B8 |
0.5 | 0.3 | -0.34 | ||
66 | AT2G20500 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 13 Blast hits to 13 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.5 | 0.31 | -0.33 | |||
67 | AT1G32660 | F-box and associated interaction domains-containing protein | -0.5 | 0.33 | -0.3 | |||
68 | ATMG01020 | hypothetical protein | ORF153B | -0.5 | 0.3 | -0.3 | ||
69 | AT4G18400 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.5 | 0.31 | -0.32 | |||
70 | AT4G17620 | glycine-rich protein | 0.5 | 0.31 | -0.31 | |||
71 | AT3G42110 | transposable element gene | -0.5 | 0.32 | -0.29 | |||
72 | AT3G14750 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G67170.1); Has 4036 Blast hits to 3091 proteins in 519 species: Archae - 61; Bacteria - 669; Metazoa - 1503; Fungi - 255; Plants - 421; Viruses - 4; Other Eukaryotes - 1123 (source: NCBI BLink). |
0.5 | 0.33 | -0.32 | |||
73 | AT1G79190 | ARM repeat superfamily protein | 0.5 | 0.33 | -0.32 | |||
74 | AT1G79620 | Leucine-rich repeat protein kinase family protein | 0.49 | 0.32 | -0.29 | |||
75 | AT1G02950 | glutathione S-transferase F4 | glutathione S-transferase F4, GLUTATHIONE S-TRANSFERASE 31, glutathione S-transferase F4 |
0.49 | 0.31 | -0.3 | ||
76 | AT5G61580 | phosphofructokinase 4 | phosphofructokinase 4 | -0.49 | 0.3 | -0.33 | ||
77 | AT3G27100 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, enhancer of yellow 2 (InterPro:IPR018783); Has 288 Blast hits to 288 proteins in 94 species: Archae - 0; Bacteria - 0; Metazoa - 197; Fungi - 20; Plants - 51; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). |
0.49 | 0.33 | -0.31 | |||
78 | AT3G14490 | Terpenoid cyclases/Protein prenyltransferases superfamily protein |
-0.49 | 0.32 | -0.3 | |||
79 | AT3G28750 | unknown protein; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1216 (InterPro:IPR009605); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G39880.1); Has 37 Blast hits to 31 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). |
0.49 | 0.31 | -0.31 | |||
80 | AT4G18350 | nine-cis-epoxycarotenoid dioxygenase 2 | NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 2, nine-cis-epoxycarotenoid dioxygenase 2 |
0.48 | 0.33 | -0.34 | ||
81 | AT4G23910 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G10970.4); Has 52 Blast hits to 52 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 52; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.48 | 0.32 | -0.32 | |||
82 | AT5G17370 | Transducin/WD40 repeat-like superfamily protein | 0.48 | 0.32 | -0.31 |