AT1G65650 : UCH2
Query Information
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AGICode AT1G65650
Description Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G65650 Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 UCH2 1 0.29 -0.32
2 AT1G51510 RNA-binding (RRM/RBD/RNP motifs) family protein Y14 0.87 0.3 -0.31
3 AT3G22110 20S proteasome alpha subunit C1 20S proteasome alpha subunit C1 0.85 0.3 -0.3
4 AT3G19760 eukaryotic initiation factor 4A-III eukaryotic initiation factor
4A-III		 0.84 0.32 -0.35
5 AT1G13870 calmodulin binding;purine nucleotide binding AtKTI12, DEFORMED ROOTS AND LEAVES
1		 0.82 0.3 -0.31
6 AT3G29360 UDP-glucose 6-dehydrogenase family protein UDP-glucose dehydrogenase 2 0.82 0.3 -0.33
7 AT5G41950 Tetratricopeptide repeat (TPR)-like superfamily protein 0.82 0.32 -0.34
8 AT1G08780 ABI3-interacting protein 3 ABI3-interacting protein 3,
PREFOLDIN 4		 0.82 0.31 -0.32
9 AT5G57370 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1777 (InterPro:IPR013957); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.82 0.32 -0.31
10 AT3G43720 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.82 0.31 -0.31
11 AT3G04830 Protein prenylyltransferase superfamily protein 0.81 0.31 -0.33
12 AT5G58230 Transducin/WD40 repeat-like superfamily protein ARABIDOPSIS MULTICOPY SUPRESSOR OF
IRA1, MATERNAL EFFECT EMBRYO
ARREST 70, MULTICOPY SUPRESSOR OF
IRA1		 0.81 0.31 -0.3
13 AT5G57460 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane, chloroplast; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; Has 166 Blast hits to
166 proteins in 41 species: Archae - 0; Bacteria - 0;
Metazoa - 112; Fungi - 4; Plants - 36; Viruses - 0; Other
Eukaryotes - 14 (source: NCBI BLink).		 0.81 0.31 -0.29
14 AT5G27470 seryl-tRNA synthetase / serine--tRNA ligase 0.81 0.3 -0.29
15 AT3G49720 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, Golgi apparatus, plasma
membrane, membrane; EXPRESSED IN: 25 plant structures;
EXPRESSED DURING: 15 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G65810.1); Has 64 Blast hits to 64 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.8 0.33 -0.3
16 AT2G34590 Transketolase family protein 0.8 0.34 -0.31
17 AT3G56800 calmodulin 3 CALMODULIN 3, calmodulin 3 0.8 0.32 -0.32
18 AT5G03300 adenosine kinase 2 adenosine kinase 2 0.8 0.3 -0.33
19 AT1G78040 Pollen Ole e 1 allergen and extensin family protein 0.8 0.33 -0.3
20 AT1G26630 Eukaryotic translation initiation factor 5A-1 (eIF-5A 1)
protein		 EUKARYOTIC ELONGATION FACTOR 5A-2,
EUKARYOTIC ELONGATION FACTOR 5A-2,
FUMONISIN B1-RESISTANT12		 0.8 0.33 -0.29
21 AT1G71900 Protein of unknown function (DUF803) 0.8 0.31 -0.32
22 AT3G51010 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, plastid; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 24 Blast hits to 24
proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.8 0.34 -0.31
23 AT2G39900 GATA type zinc finger transcription factor family protein WLIM2a 0.8 0.32 -0.32
24 AT2G43770 Transducin/WD40 repeat-like superfamily protein 0.79 0.31 -0.33
25 AT3G07170 Sterile alpha motif (SAM) domain-containing protein 0.79 0.32 -0.31
26 AT4G29830 Transducin/WD40 repeat-like superfamily protein vernalization independence 3 0.78 0.32 -0.32
27 AT3G01340 Transducin/WD40 repeat-like superfamily protein 0.78 0.31 -0.31
28 AT2G46230 PIN domain-like family protein 0.78 0.3 -0.32
29 AT5G05780 RP non-ATPase subunit 8A ASYMMETRIC LEAVES ENHANCER 3,
ATHMOV34, RP non-ATPase subunit 8A		 0.78 0.33 -0.29
30 AT3G43810 calmodulin 7 calmodulin 7 0.78 0.32 -0.3
31 AT1G10430 protein phosphatase 2A-2 protein phosphatase 2A-2 0.78 0.3 -0.33
32 AT3G22460 O-acetylserine (thiol) lyase (OAS-TL) isoform A2 O-acetylserine (thiol) lyase
(OAS-TL) isoform A2		 -0.77 0.3 -0.31
33 AT4G29390 Ribosomal protein S30 family protein 0.77 0.3 -0.31
34 AT4G26430 COP9 signalosome subunit 6B COP9 signalosome subunit 6B 0.77 0.32 -0.32
35 AT5G40600 unknown protein; FUNCTIONS IN: molecular_function unknown;
LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G27420.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.77 0.33 -0.3
36 AT3G62840 Small nuclear ribonucleoprotein family protein 0.77 0.33 -0.31
37 AT3G19980 flower-specific, phytochrome-associated protein phosphatase
3		 flower-specific,
phytochrome-associated protein
phosphatase 3, EMBRYO DEFECTIVE
2736, flower-specific,
phytochrome-associated protein
phosphatase 3, SERINE/THREONINE
PROTEIN PHOSPHATASE		 0.77 0.31 -0.32
38 AT3G55380 ubiquitin-conjugating enzyme 14 ubiquitin-conjugating enzyme 14 0.77 0.28 -0.31
39 AT3G49910 Translation protein SH3-like family protein 0.76 0.32 -0.31
40 AT3G07300 NagB/RpiA/CoA transferase-like superfamily protein 0.76 0.31 -0.31
41 AT3G22950 ADP-ribosylation factor C1 ADP-ribosylation factor C1,
ADP-ribosylation factor C1		 0.76 0.31 -0.28
42 AT1G48900 Signal recognition particle, SRP54 subunit protein 0.75 0.32 -0.31
43 AT3G13674 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 11 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G55205.1); Has 76 Blast
hits to 76 proteins in 10 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.75 0.33 -0.34
44 AT1G07360 CCCH-type zinc fingerfamily protein with RNA-binding domain MOS4-associated complex subunit 5A 0.75 0.3 -0.32
45 AT2G47170 Ras-related small GTP-binding family protein ARF1A1C 0.75 0.33 -0.32
46 AT3G52590 ubiquitin extension protein 1 EMBRYO DEFECTIVE 2167,
EARLY-RESPONSIVE TO DEHYDRATION
16, HAPLESS 4, ubiquitin extension
protein 1		 0.75 0.29 -0.31
47 AT5G45590 Ribosomal protein L35 0.74 0.33 -0.31
48 AT2G31360 16:0delta9 desaturase 2 16:0delta9 desaturase 2,
16:0delta9 desaturase 2		 0.74 0.32 -0.32
49 AT2G29700 pleckstrin homologue 1 pleckstrin homologue 1, pleckstrin
homologue 1		 0.74 0.31 -0.31
50 AT3G18940 clast3-related 0.74 0.31 -0.32
51 AT3G44380 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 0.74 0.32 -0.3
52 AT1G14790 RNA-dependent RNA polymerase 1 ATRDRP1, RNA-dependent RNA
polymerase 1		 -0.74 0.32 -0.33
53 AT3G46030 Histone superfamily protein HTB11 0.74 0.34 -0.31
54 AT5G08040 mitochondrial import receptor subunit TOM5 homolog mitochondrial import receptor
subunit TOM5 homolog		 0.74 0.32 -0.32
55 AT2G42310 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G57785.1); Has 115 Blast hits
to 115 proteins in 48 species: Archae - 0; Bacteria - 0;
Metazoa - 4; Fungi - 44; Plants - 67; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.74 0.33 -0.3
56 AT4G10810 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G24026.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.74 0.3 -0.32
57 AT1G10630 ADP-ribosylation factor A1F ADP-ribosylation factor A1F,
ADP-ribosylation factor A1F		 0.74 0.31 -0.31
58 AT5G11010 Pre-mRNA cleavage complex II protein family 0.74 0.32 -0.33
59 AT1G71750 Hypoxanthine-guanine phosphoribosyltransferase Hypoxanthine-guanine
phosphoribosyltransferase		 0.73 0.32 -0.31
60 AT1G12310 Calcium-binding EF-hand family protein 0.73 0.31 -0.3
61 AT4G38060 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G65480.1); Has 63 Blast hits
to 63 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.73 0.31 -0.31
62 AT4G04740 calcium-dependent protein kinase 23 ATCPK23, calcium-dependent protein
kinase 23		 -0.73 0.32 -0.31
63 AT1G73250 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase 1 ACTIVATING TRANSCRIPTION FACTOR 5,
GDP-4-keto-6-deoxymannose-3,5-epim
erase-4-reductase 1		 0.73 0.32 -0.33
64 AT3G05500 Rubber elongation factor protein (REF) 0.73 0.3 -0.29
65 AT3G55730 myb domain protein 109 myb domain protein 109, myb domain
protein 109		 0.73 0.3 -0.28
66 AT2G22475 GRAM domain family protein GL2-EXPRESSION MODULATOR 0.73 0.32 -0.31
67 AT2G44610 Ras-related small GTP-binding family protein ATRAB6A, ATRABH1B, RAB6, RAB6A 0.73 0.3 -0.33
68 AT3G11800 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G44150.1); Has 74 Blast hits to 73 proteins in 18
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 72; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.73 0.31 -0.32
69 AT4G31580 serine/arginine-rich 22 RS-containing zinc finger protein
22, RS-containing zinc finger
protein 22, RS-CONTAINING ZINC
FINGER PROTEIN 22,
serine/arginine-rich 22, SRZ22		 0.73 0.32 -0.32
70 AT2G19760 profilin 1 PROFILIN 1, profilin 1 0.73 0.31 -0.29
71 AT1G26840 origin recognition complex protein 6 ARABIDOPSIS THALIANA ORIGIN
RECOGNITION COMPLEX PROTEIN 6,
origin recognition complex protein
6		 0.73 0.32 -0.29
72 AT2G20810 galacturonosyltransferase 10 galacturonosyltransferase 10, LGT4 0.72 0.29 -0.3
73 AT4G08420 transposable element gene 0.72 0.31 -0.3
74 AT1G05850 Chitinase family protein ATCTL1, CHITINASE-LIKE PROTEIN 1,
ECTOPIC DEPOSITION OF LIGNIN IN
PITH, ECTOPIC DEPOSITION OF LIGNIN
IN PITH 1, ECTOPIC ROOT HAIR 2,
SENSITIVE TO HOT TEMPERATURES 2,
POM-POM1		 0.72 0.31 -0.32
75 AT1G78300 general regulatory factor 2 14-3-3 PROTEIN G-BOX FACTOR14
OMEGA, GF14 OMEGA, general
regulatory factor 2		 0.72 0.31 -0.32
76 AT5G37890 Protein with RING/U-box and TRAF-like domains 0.72 0.32 -0.32
77 AT2G24490 replicon protein A2 ATRPA2, ATRPA32A, SUPPRESSOR OF
ROS1, replicon protein A2, RPA32A		 0.72 0.32 -0.31
78 AT3G51600 lipid transfer protein 5 lipid transfer protein 5 0.72 0.32 -0.31
79 AT2G21870 copper ion binding;cobalt ion binding;zinc ion binding MALE GAMETOPHYTE DEFECTIVE 1 0.72 0.32 -0.32
80 AT5G43840 heat shock transcription factor A6A heat shock transcription factor
A6A, heat shock transcription
factor A6A		 -0.7 0.35 -0.32
81 AT4G36980 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Splicing factor, suppressor of white
apricot (InterPro:IPR019147); Has 7672 Blast hits to 5479
proteins in 321 species: Archae - 0; Bacteria - 89; Metazoa
- 5155; Fungi - 712; Plants - 341; Viruses - 39; Other
Eukaryotes - 1336 (source: NCBI BLink).		 -0.7 0.33 -0.33
82 AT4G02020 SET domain-containing protein EZA1, SET DOMAIN-CONTAINING
PROTEIN 10, SWINGER		 -0.69 0.34 -0.31
83 AT4G21550 VP1/ABI3-like 3 VP1/ABI3-like 3 -0.67 0.32 -0.31
84 AT2G17975 zinc finger (Ran-binding) family protein -0.67 0.3 -0.32
85 AT5G24130 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: petal, leaf whorl, flower;
EXPRESSED DURING: 4 anthesis, petal differentiation and
expansion stage; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.67 0.3 -0.34
86 AT5G13690 alpha-N-acetylglucosaminidase family / NAGLU family CYCLOPS 1,
N-ACETYL-GLUCOSAMINIDASE		 -0.67 0.33 -0.3
87 AT2G36670 Eukaryotic aspartyl protease family protein -0.67 0.31 -0.31
88 AT2G34610 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G30190.1); Has 342 Blast hits
to 279 proteins in 74 species: Archae - 0; Bacteria - 7;
Metazoa - 76; Fungi - 18; Plants - 51; Viruses - 0; Other
Eukaryotes - 190 (source: NCBI BLink).		 -0.66 0.31 -0.32
89 AT5G54350 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast; BEST
Arabidopsis thaliana protein match is: C2H2-like zinc
finger protein (TAIR:AT5G54360.1); Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.65 0.29 -0.32
90 AT2G37650 GRAS family transcription factor -0.65 0.31 -0.3
91 AT4G00800 transducin family protein / WD-40 repeat family protein SETH5 -0.65 0.28 -0.33
92 AT3G13065 STRUBBELIG-receptor family 4 STRUBBELIG-receptor family 4 -0.64 0.3 -0.31
93 AT1G63740 Disease resistance protein (TIR-NBS-LRR class) family -0.64 0.31 -0.33
94 ATMG00400 hypothetical protein ORF157 -0.64 0.3 -0.33
95 AT3G27670 ARM repeat superfamily protein RESURRECTION1 -0.63 0.3 -0.31
96 AT3G17980 Calcium-dependent lipid-binding (CaLB domain) family
protein		 Arabidopsis thaliana C2 domain, C2
domain		 -0.63 0.31 -0.34
97 AT4G20880 ethylene-responsive nuclear protein / ethylene-regulated
nuclear protein (ERT2)		 -0.63 0.3 -0.3
98 AT5G27950 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.63 0.32 -0.34
99 AT5G12460 Protein of unknown function (DUF604) -0.63 0.31 -0.33
100 AT2G25760 Protein kinase family protein -0.62 0.32 -0.29
101 AT5G24010 Protein kinase superfamily protein -0.62 0.31 -0.33
102 AT5G15020 SIN3-like 2 SIN3-like 2 -0.62 0.32 -0.31
103 AT3G42460 transposable element gene -0.61 0.31 -0.31
104 AT1G58250 Golgi-body localisation protein domain ;RNA pol II promoter
Fmp27 protein domain		 SABRE -0.61 0.29 -0.32
105 AT2G15440 Protein of unknown function (DUF579) -0.61 0.32 -0.29
106 AT1G63280 Serine protease inhibitor (SERPIN) family protein -0.61 0.33 -0.28
107 AT4G04480 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN:
flower, pollen tube; EXPRESSED DURING: petal
differentiation and expansion stage; BEST Arabidopsis
thaliana protein match is: F-box family protein with a
domain of unknown function (DUF295) (TAIR:AT4G22030.1); Has
78 Blast hits to 78 proteins in 10 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.61 0.29 -0.34
108 AT3G03240 alpha/beta-Hydrolases superfamily protein -0.61 0.32 -0.31
109 AT4G04500 cysteine-rich RLK (RECEPTOR-like protein kinase) 37 cysteine-rich RLK (RECEPTOR-like
protein kinase) 37		 -0.61 0.31 -0.31
110 AT1G59950 NAD(P)-linked oxidoreductase superfamily protein -0.61 0.29 -0.32
111 AT3G12720 myb domain protein 67 myb domain protein 67, ATY53,
MYB67, myb domain protein 67		 -0.6 0.31 -0.31
112 AT2G17110 Protein of unknown function (DUF630 and DUF632) -0.6 0.31 -0.31
113 AT2G17845 NAD(P)-binding Rossmann-fold superfamily protein -0.6 0.33 -0.32
114 AT1G55250 histone mono-ubiquitination 2 histone mono-ubiquitination 2 -0.6 0.31 -0.3
115 AT1G34140 poly(A) binding protein 1 poly(A) binding protein 1 -0.6 0.31 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
116 C0136 Lactic acid D,L-Lactic acid Lactate pyruvate fermentation to lactate 0.75 0.44 -0.42 C0136
117 C0211 PR_MST_2158.8 - - - -0.62 0.45 -0.46
118 C0029 3-Indolylacetonitrile - Indole-3-acetonitrile indole glucosinolate breakdown (insect chewing induced),
IAA biosynthesis I,
camalexin biosynthesis 		-0.61 0.3 -0.32 C0029
119 C0254 Threonine D,L-Threonine L-Threonine isoleucine biosynthesis I (from threonine),
glycine biosynthesis,
threonine biosynthesis from homoserine,
tRNA charging 		-0.6 0.33 -0.29 C0254