AT1G09660 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT1G09660
Description RNA-binding KH domain-containing protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G09660 RNA-binding KH domain-containing protein 1 0.32 -0.33
2 AT1G47960 cell wall / vacuolar inhibitor of fructosidase 1 CELL WALL / VACUOLAR INHIBITOR OF
FRUCTOSIDASE 1, cell wall /
vacuolar inhibitor of fructosidase
1		 -0.8 0.32 -0.32
3 AT1G14610 valyl-tRNA synthetase / valine--tRNA ligase (VALRS) TWIN 2, VALYL TRNA SYNTHETASE 0.78 0.32 -0.32
4 AT1G18070 Translation elongation factor EF1A/initiation factor
IF2gamma family protein		 0.77 0.32 -0.32
5 AT5G04080 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 16 plant structures; EXPRESSED
DURING: 9 growth stages; Has 115 Blast hits to 115 proteins
in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 5; Plants - 110; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.76 0.33 -0.29
6 AT1G60080 3'-5'-exoribonuclease family protein 0.76 0.31 -0.31
7 AT1G73040 Mannose-binding lectin superfamily protein -0.75 0.32 -0.3
8 AT1G20220 Alba DNA/RNA-binding protein 0.75 0.3 -0.29
9 AT2G22430 homeobox protein 6 homeobox protein 6, homeobox
protein 6		 -0.75 0.31 -0.33
10 AT4G19390 Uncharacterised protein family (UPF0114) -0.74 0.31 -0.3
11 AT1G62390 Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein
/ tetratricopeptide repeat (TPR)-containing protein		 CLUMPED CHLOROPLASTS 1, Phox2 0.74 0.29 -0.3
12 AT1G76120 Pseudouridine synthase family protein 0.73 0.31 -0.31
13 AT2G30550 alpha/beta-Hydrolases superfamily protein -0.73 0.32 -0.32
14 AT1G20410 Pseudouridine synthase family protein 0.73 0.31 -0.29
15 AT3G15790 methyl-CPG-binding domain 11 ATMBD11, methyl-CPG-binding domain
11		 -0.72 0.32 -0.32
16 AT1G77550 tubulin-tyrosine ligases;tubulin-tyrosine ligases 0.72 0.34 -0.31
17 AT1G08460 histone deacetylase 8 ATHDA8, histone deacetylase 8,
HISTONE DEACETYLASE 8		 -0.72 0.32 -0.32
18 AT4G17940 Tetratricopeptide repeat (TPR)-like superfamily protein -0.72 0.33 -0.32
19 AT5G18820 TCP-1/cpn60 chaperonin family protein chaperonin-60alpha2, embryo
defective 3007		 0.72 0.3 -0.3
20 AT5G42320 Zn-dependent exopeptidases superfamily protein 0.71 0.31 -0.33
21 AT3G21110 purin 7 ATPURC, purin 7, PURIN C 0.71 0.3 -0.31
22 AT1G59990 DEA(D/H)-box RNA helicase family protein EMBRYO DEFECTIVE 3108, RNA
helicase 22		 0.71 0.31 -0.32
23 AT1G50740 Transmembrane proteins 14C -0.71 0.31 -0.3
24 AT5G04760 Duplicated homeodomain-like superfamily protein -0.7 0.3 -0.31
25 AT1G48000 myb domain protein 112 myb domain protein 112, myb domain
protein 112		 -0.7 0.29 -0.33
26 AT2G28400 Protein of unknown function, DUF584 -0.7 0.3 -0.31
27 AT3G06040 Ribosomal protein L12/ ATP-dependent Clp protease adaptor
protein ClpS family protein		 0.69 0.33 -0.3
28 AT1G28230 purine permease 1 ATPUP1, purine permease 1 -0.69 0.34 -0.31
29 AT1G28530 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 10 growth stages; Has 20 Blast hits to 20
proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.69 0.33 -0.31
30 AT1G45110 Tetrapyrrole (Corrin/Porphyrin) Methylases 0.68 0.29 -0.31
31 AT1G23280 MAK16 protein-related 0.68 0.31 -0.32
32 AT1G69260 ABI five binding protein ABI five binding protein -0.68 0.31 -0.3
33 AT1G22890 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 11 growth stages; Has 17 Blast hits to 17
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.67 0.32 -0.32
34 AT2G43650 Sas10/U3 ribonucleoprotein (Utp) family protein EMBRYO DEFECTIVE 2777 0.67 0.33 -0.35
35 AT2G34700 Pollen Ole e 1 allergen and extensin family protein 0.67 0.3 -0.33
36 AT5G43010 regulatory particle triple-A ATPase 4A regulatory particle triple-A
ATPase 4A		 0.67 0.33 -0.32
37 AT1G20230 Pentatricopeptide repeat (PPR) superfamily protein 0.67 0.31 -0.32
38 AT1G48230 nodulin MtN21 /EamA-like transporter family protein 0.67 0.32 -0.3
39 AT1G09660 RNA-binding KH domain-containing protein 0.67 0.34 -0.31
40 AT1G56090 Tetratricopeptide repeat (TPR)-like superfamily protein -0.67 0.32 -0.3
41 AT1G80410 tetratricopeptide repeat (TPR)-containing protein EMBRYO DEFECTIVE 2753, OMISHA 0.67 0.31 -0.3
42 AT3G54920 Pectin lyase-like superfamily protein powdery mildew resistant 6 0.66 0.33 -0.3
43 AT5G63030 Thioredoxin superfamily protein glutaredoxin C1 -0.66 0.32 -0.3
44 AT1G60070 Adaptor protein complex AP-1, gamma subunit 0.65 0.31 -0.32
45 AT4G14170 Pentatricopeptide repeat (PPR) superfamily protein 0.65 0.33 -0.32
46 AT3G23660 Sec23/Sec24 protein transport family protein 0.65 0.32 -0.31
47 AT4G22970 homolog of separase homolog of separase, homolog of
separase, SEPARASE, RADIALLY
SWOLLEN 4		 0.65 0.31 -0.3
48 AT5G11890 FUNCTIONS IN: molecular_function unknown; LOCATED IN:
plasma membrane; EXPRESSED IN: 12 plant structures;
EXPRESSED DURING: 6 growth stages; BEST Arabidopsis
thaliana protein match is: Late embryogenesis abundant
(LEA) hydroxyproline-rich glycoprotein family
(TAIR:AT1G17620.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 EMBRYO DEFECTIVE 3135 0.65 0.32 -0.33
49 AT4G37380 Tetratricopeptide repeat (TPR)-like superfamily protein 0.65 0.32 -0.31
50 AT3G54390 sequence-specific DNA binding transcription factors -0.65 0.33 -0.32
51 AT3G14120 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
transport; LOCATED IN: nuclear pore; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Nuclear pore protein 84/107
(InterPro:IPR007252); Has 5399 Blast hits to 5001 proteins
in 612 species: Archae - 19; Bacteria - 730; Metazoa -
2186; Fungi - 823; Plants - 382; Viruses - 37; Other
Eukaryotes - 1222 (source: NCBI BLink).		 0.65 0.31 -0.31
52 AT5G40040 60S acidic ribosomal protein family 0.64 0.3 -0.32
53 AT4G27470 RING membrane-anchor 3 ATRMA3, RING membrane-anchor 3 -0.64 0.32 -0.34
54 AT1G72560 ARM repeat superfamily protein PAUSED 0.64 0.33 -0.32
55 AT4G10090 elongator protein 6 elongator protein 6 0.64 0.32 -0.3
56 AT1G02390 glycerol-3-phosphate acyltransferase 2 ARABIDOPSIS THALIANA
GLYCEROL-3-PHOSPHATE
ACYLTRANSFERASE 2,
glycerol-3-phosphate
acyltransferase 2		 -0.64 0.33 -0.33
57 AT5G18470 Curculin-like (mannose-binding) lectin family protein -0.64 0.31 -0.31
58 AT1G69270 receptor-like protein kinase 1 receptor-like protein kinase 1 -0.63 0.34 -0.3
59 AT1G62710 beta vacuolar processing enzyme beta vacuolar processing enzyme,
BETAVPE		 -0.63 0.31 -0.34
60 AT4G26090 NB-ARC domain-containing disease resistance protein RESISTANT TO P. SYRINGAE 2 -0.63 0.3 -0.34
61 AT2G46800 zinc transporter of Arabidopsis thaliana A. THALIANA CATION DIFFUSION
FACILITATOR 1, ATMTP1, MTP1, zinc
transporter of Arabidopsis
thaliana, ZINC TRANSPORTER OF
ARABIDOPSIS THALIANA 1		 -0.63 0.31 -0.33
62 AT1G09520 LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 12 growth stages; CONTAINS InterPro
DOMAIN/s: Zinc finger, PHD-type, conserved site
(InterPro:IPR019786); BEST Arabidopsis thaliana protein
match is: PHD finger family protein (TAIR:AT3G17460.1); Has
56 Blast hits to 56 proteins in 17 species: Archae - 0;
Bacteria - 2; Metazoa - 0; Fungi - 4; Plants - 46; Viruses
- 0; Other Eukaryotes - 4 (source: NCBI BLink).		 -0.63 0.34 -0.32
63 AT4G26160 atypical CYS HIS rich thioredoxin 1 atypical CYS HIS rich thioredoxin
1		 -0.63 0.3 -0.3
64 AT4G37220 Cold acclimation protein WCOR413 family -0.62 0.33 -0.29
65 AT3G03150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G17165.1); Has 39 Blast
hits to 39 proteins in 11 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.62 0.31 -0.32
66 AT5G27320 alpha/beta-Hydrolases superfamily protein ATGID1C, GA INSENSITIVE DWARF1C -0.62 0.31 -0.32
67 AT2G04240 RING/U-box superfamily protein XERICO -0.62 0.32 -0.31
68 AT2G43330 inositol transporter 1 INOSITOL TRANSPORTER 1, inositol
transporter 1		 -0.62 0.32 -0.31
69 AT4G22740 glycine-rich protein -0.62 0.32 -0.33
70 AT4G38460 geranylgeranyl reductase geranylgeranyl reductase -0.61 0.3 -0.33
71 AT1G07230 non-specific phospholipase C1 non-specific phospholipase C1 -0.61 0.29 -0.31
72 AT4G39210 Glucose-1-phosphate adenylyltransferase family protein APL3 -0.61 0.31 -0.31
73 AT4G36150 Disease resistance protein (TIR-NBS-LRR class) family -0.61 0.3 -0.31
74 AT1G72760 Protein kinase superfamily protein -0.61 0.32 -0.32
75 AT1G51550 Kelch repeat-containing F-box family protein -0.61 0.3 -0.3
76 AT1G50630 Protein of unknown function (DUF3537) -0.61 0.31 -0.31
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
77 C0143 Maltitol - - starch degradation II -0.69 0.41 -0.43
78 C0146 Mannitol D-Mannitol Mannitol mannitol degradation II -0.65 0.45 -0.42 C0146