AT1G09815 : polymerase delta 4
Query Information
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AGICode AT1G09815
Description polymerase delta 4
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G09815 polymerase delta 4 polymerase delta 4 1 0.32 -0.32
2 AT4G25890 60S acidic ribosomal protein family 0.83 0.31 -0.32
3 AT5G05990 Mitochondrial glycoprotein family protein 0.82 0.34 -0.33
4 AT5G23290 prefoldin 5 prefoldin 5 0.81 0.32 -0.3
5 AT1G76300 snRNP core protein SMD3 snRNP core protein SMD3 0.78 0.31 -0.32
6 AT1G70310 spermidine synthase 2 spermidine synthase 2 0.78 0.3 -0.32
7 AT3G10730 SAD1/UNC-84 domain protein 2 ARABIDOPSIS SAD1/UNC-84 DOMAIN
PROTEIN 2, SAD1/UNC-84 domain
protein 2		 0.77 0.3 -0.31
8 AT2G26890 DNAJ heat shock N-terminal domain-containing protein GRAVITROPISM DEFECTIVE 2,
KATAMARI2		 -0.77 0.3 -0.33
9 AT5G22850 Eukaryotic aspartyl protease family protein -0.76 0.31 -0.31
10 AT5G57390 AINTEGUMENTA-like 5 AINTEGUMENTA-like 5, CHOTTO 1,
EMBRYOMAKER, PLETHORA 5		 -0.76 0.31 -0.32
11 AT3G12180 Cornichon family protein 0.76 0.31 -0.3
12 AT4G05400 copper ion binding 0.75 0.32 -0.31
13 AT1G73980 Phosphoribulokinase / Uridine kinase family -0.75 0.32 -0.32
14 AT3G63090 Ubiquitin carboxyl-terminal hydrolase family protein 0.74 0.31 -0.31
15 AT5G58030 Transport protein particle (TRAPP) component 0.74 0.3 -0.33
16 AT5G10400 Histone superfamily protein 0.74 0.31 -0.32
17 AT2G01120 origin recognition complex subunit 4 ORIGIN RECOGNITION COMPLEX SUBUNIT
4, origin recognition complex
subunit 4		 0.74 0.32 -0.32
18 AT3G62590 alpha/beta-Hydrolases superfamily protein -0.73 0.32 -0.31
19 AT3G14080 Small nuclear ribonucleoprotein family protein 0.73 0.32 -0.31
20 AT1G67310 Calmodulin-binding transcription activator protein with
CG-1 and Ankyrin domains		 -0.73 0.28 -0.33
21 AT1G28260 Telomerase activating protein Est1 -0.73 0.31 -0.33
22 AT2G45910 U-box domain-containing protein kinase family protein -0.72 0.32 -0.32
23 AT2G35060 K+ uptake permease 11 K+ uptake permease 11 -0.72 0.32 -0.32
24 AT1G51060 histone H2A 10 histone H2A 10 0.72 0.35 -0.29
25 AT5G11700 LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: glycine-rich protein
(TAIR:AT4G32920.3); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.72 0.32 -0.31
26 AT1G02080 transcription regulators -0.72 0.31 -0.31
27 AT2G30060 Pleckstrin homology (PH) domain superfamily protein 0.72 0.32 -0.29
28 AT4G36420 Ribosomal protein L12 family protein 0.71 0.31 -0.31
29 AT2G01460 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.71 0.32 -0.31
30 AT1G47980 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 6 plant structures;
EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal
differentiation and expansion stage, E expanded cotyledon
stage; BEST Arabidopsis thaliana protein match is: unknown
protein (TAIR:AT3G62730.1); Has 169 Blast hits to 169
proteins in 41 species: Archae - 0; Bacteria - 68; Metazoa
- 0; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes
- 0 (source: NCBI BLink).		 -0.71 0.33 -0.31
31 AT2G38160 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G40070.2); Has 972 Blast hits
to 731 proteins in 211 species: Archae - 0; Bacteria - 236;
Metazoa - 194; Fungi - 201; Plants - 218; Viruses - 32;
Other Eukaryotes - 91 (source: NCBI BLink).		 0.71 0.3 -0.31
32 AT4G18800 RAB GTPase homolog A1D ATHSGBP, ATRAB11B, RAB GTPase
homolog A1D, RAB GTPase homolog
A1D		 0.7 0.34 -0.31
33 AT2G31960 glucan synthase-like 3 glucan synthase-like 3, ATGSL3,
GSL03, glucan synthase-like 3		 -0.7 0.3 -0.3
34 AT4G01990 Tetratricopeptide repeat (TPR)-like superfamily protein 0.7 0.31 -0.31
35 AT5G15770 glucose-6-phosphate acetyltransferase 1 glucose-6-phosphate
acetyltransferase 1,
glucose-6-phosphate
acetyltransferase 1		 0.7 0.31 -0.32
36 AT5G64650 Ribosomal protein L17 family protein 0.7 0.31 -0.33
37 AT1G20770 unknown protein; Has 59 Blast hits to 59 proteins in 24
species: Archae - 0; Bacteria - 0; Metazoa - 26; Fungi - 4;
Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.7 0.31 -0.3
38 AT5G49010 DNA replication protein-related EMBRYO DEFECTIVE 2812, SYNTHETIC
LETHALITY WITH DPB11-1 5		 0.7 0.32 -0.31
39 AT1G58230 binding -0.69 0.31 -0.34
40 AT5G16630 DNA repair protein Rad4 family ATRAD4, RAD4 -0.69 0.32 -0.32
41 AT1G26450 Carbohydrate-binding X8 domain superfamily protein -0.68 0.32 -0.33
42 AT1G31480 shoot gravitropism 2 (SGR2) SHOOT GRAVITROPISM 2 -0.68 0.35 -0.34
43 AT5G05570 transducin family protein / WD-40 repeat family protein -0.68 0.32 -0.33
44 AT1G15780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast
hits to 43153 proteins in 1828 species: Archae - 30;
Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants -
7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI
BLink).		 -0.68 0.31 -0.31
45 AT5G16520 unknown protein; Has 25 Blast hits to 25 proteins in 9
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.68 0.32 -0.31
46 AT1G02310 Glycosyl hydrolase superfamily protein endo-beta-mannanase 1 -0.68 0.33 -0.32
47 AT3G27870 ATPase E1-E2 type family protein / haloacid
dehalogenase-like hydrolase family protein		 -0.68 0.33 -0.3
48 AT3G07160 glucan synthase-like 10 glucan synthase-like 10, CALS9,
gsl10, glucan synthase-like 10		 -0.67 0.31 -0.32
49 AT1G36510 Nucleic acid-binding proteins superfamily -0.67 0.32 -0.31
50 AT4G34040 RING/U-box superfamily protein -0.67 0.34 -0.33
51 AT5G50170 C2 calcium/lipid-binding and GRAM domain containing protein -0.67 0.31 -0.33
52 AT4G38600 HEAT repeat ;HECT-domain (ubiquitin-transferase) KAKTUS, UBIQUITIN-PROTEIN LIGASE 3 -0.66 0.29 -0.3
53 AT2G17000 Mechanosensitive ion channel family protein -0.65 0.32 -0.33
54 AT4G32850 nuclear poly(a) polymerase nuclear poly(a) polymerase,
poly(A) polymerase IV		 -0.65 0.31 -0.32
55 AT4G38600 HEAT repeat ;HECT-domain (ubiquitin-transferase) KAKTUS, UBIQUITIN-PROTEIN LIGASE 3 -0.65 0.32 -0.29
56 AT4G26180 Mitochondrial substrate carrier family protein -0.65 0.31 -0.31
57 AT5G40340 Tudor/PWWP/MBT superfamily protein -0.64 0.33 -0.32
58 AT5G37180 sucrose synthase 5 ARABIDOPSIS THALIANA SUCROSE
SYNTHASE 5, sucrose synthase 5		 -0.64 0.3 -0.32
59 AT4G18990 xyloglucan endotransglucosylase/hydrolase 29 xyloglucan
endotransglucosylase/hydrolase 29		 -0.64 0.33 -0.31
60 AT3G12810 SNF2 domain-containing protein / helicase domain-containing
protein		 chr13, PHOTOPERIOD-INDEPENDENT
EARLY FLOWERING 1, SRCAP		 -0.63 0.32 -0.3
61 AT3G09850 D111/G-patch domain-containing protein -0.63 0.32 -0.31
62 AT4G33240 1-phosphatidylinositol-4-phosphate 5-kinases;zinc ion
binding;1-phosphatidylinositol-3-phosphate 5-kinases		 FORMS APLOID AND BINUCLEATE CELLS
1A		 -0.63 0.31 -0.31
63 AT1G72650 TRF-like 6 TRF-like 6 -0.63 0.31 -0.3
64 AT5G49130 MATE efflux family protein -0.63 0.32 -0.34
65 AT3G14570 glucan synthase-like 4 glucan synthase-like 4, atgsl4,
gsl04, glucan synthase-like 4		 -0.63 0.35 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
66 C0258 Tryptophan amide (NH3+) D,L-Tryptophan amide (NH3+) - - -0.79 0.44 -0.43
67 C0257 Tryptophan L-Tryptophan L-Tryptophan glucosinolate biosynthesis from tryptophan,
IAA biosynthesis I,
tryptophan biosynthesis,
camalexin biosynthesis,
tRNA charging 		-0.67 0.34 -0.3 C0257