AGICode | AT1G09720 |
Description | Kinase interacting (KIP1-like) family protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT1G09720 | Kinase interacting (KIP1-like) family protein | 1 | 0.35 | -0.34 | |||
2 | AT5G59660 | Leucine-rich repeat protein kinase family protein | -0.63 | 0.3 | -0.31 | |||
3 | AT3G62350 | BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G71320.1); Has 136 Blast hits to 136 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 134; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
-0.61 | 0.34 | -0.33 | |||
4 | AT3G13350 | HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain |
-0.6 | 0.33 | -0.31 | |||
5 | AT4G03770 | transposable element gene | -0.59 | 0.33 | -0.32 | |||
6 | AT4G04690 | F-box and associated interaction domains-containing protein | -0.58 | 0.3 | -0.3 | |||
7 | AT4G38190 | cellulose synthase like D4 | ARABIDOPSIS THALIANA CELLULOSE SYNTHASE-LIKE D4, cellulose synthase like D4 |
0.57 | 0.28 | -0.32 | ||
8 | AT5G58470 | TBP-associated factor 15B | TBP-associated factor 15B | -0.57 | 0.3 | -0.29 | ||
9 | AT3G42340 | transposable element gene | -0.57 | 0.3 | -0.32 | |||
10 | AT5G24390 | Ypt/Rab-GAP domain of gyp1p superfamily protein | -0.56 | 0.34 | -0.29 | |||
11 | AT5G54700 | Ankyrin repeat family protein | -0.56 | 0.3 | -0.3 | |||
12 | ATMG00050 | hypothetical protein | ORF131 | -0.56 | 0.32 | -0.31 | ||
13 | AT3G30350 | Encodes a root meristem growth factor (RGF). Belongs to a family of functionally redundant homologous peptides that are secreted, tyrosine-sulfated, and expressed mainly in the stem cell area and the innermost layer of central columella cells. RGFs are required for maintenance of the root stem cell niche and transit amplifying cell proliferation. Members of this family include: At5g60810 (RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350 (RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240 (RGF7), At2g03830 (RGF8) and At5g64770 (RGF9). |
root meristem growth factor 4 | -0.56 | 0.34 | -0.31 | ||
14 | AT1G17370 | oligouridylate binding protein 1B | oligouridylate binding protein 1B | -0.56 | 0.34 | -0.3 | ||
15 | AT5G40820 | Ataxia telangiectasia-mutated and RAD3-related | ARABIDOPSIS THALIANA ATAXIA TELANGIECTASIA-MUTATED AND RAD3-RELATED, Ataxia telangiectasia-mutated and RAD3-related, ATRAD3 |
0.55 | 0.32 | -0.31 | ||
16 | AT5G48330 | Regulator of chromosome condensation (RCC1) family protein | RCC1/UVR8/GEF-like 2 | -0.55 | 0.3 | -0.32 | ||
17 | AT4G07425 | transposable element gene | 0.55 | 0.3 | -0.31 | |||
18 | AT2G28350 | auxin response factor 10 | auxin response factor 10 | -0.54 | 0.3 | -0.32 | ||
19 | AT4G21420 | transposable element gene | 0.54 | 0.3 | -0.32 | |||
20 | AT5G47440 | Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region |
-0.54 | 0.32 | -0.31 | |||
21 | AT3G30150 | transposable element gene | -0.54 | 0.32 | -0.31 | |||
22 | AT5G45180 | Flavin-binding monooxygenase family protein | 0.53 | 0.28 | -0.31 | |||
23 | AT3G29300 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; Has 451 Blast hits to 349 proteins in 91 species: Archae - 0; Bacteria - 85; Metazoa - 81; Fungi - 88; Plants - 18; Viruses - 1; Other Eukaryotes - 178 (source: NCBI BLink). |
-0.53 | 0.32 | -0.32 | |||
24 | AT5G37030 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.53 | 0.32 | -0.31 | |||
25 | AT3G14395 | unknown protein; Has 4 Blast hits to 4 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.52 | 0.32 | -0.32 | |||
26 | AT2G27480 | Calcium-binding EF-hand family protein | 0.52 | 0.33 | -0.29 | |||
27 | AT3G29330 | unknown protein; INVOLVED IN: biological_process unknown; EXPRESSED IN: stem, embryo; EXPRESSED DURING: D bilateral stage. |
0.52 | 0.29 | -0.33 | |||
28 | AT1G65210 | Galactose-binding protein | -0.51 | 0.32 | -0.33 | |||
29 | AT1G33680 | KH domain-containing protein | -0.51 | 0.32 | -0.34 | |||
30 | AT4G03660 | transposable element gene | -0.51 | 0.31 | -0.31 | |||
31 | AT4G13090 | xyloglucan endotransglucosylase/hydrolase 2 | xyloglucan endotransglucosylase/hydrolase 2 |
-0.51 | 0.31 | -0.31 | ||
32 | AT3G32130 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily protein (TAIR:AT3G25270.1); Has 95 Blast hits to 95 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.5 | 0.32 | -0.3 | |||
33 | AT1G32880 | ARM repeat superfamily protein | 0.5 | 0.3 | -0.31 | |||
34 | AT3G46480 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
-0.49 | 0.34 | -0.31 | |||
35 | AT1G21780 | BTB/POZ domain-containing protein | -0.49 | 0.31 | -0.31 | |||
36 | AT5G58360 | ovate family protein 3 | ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 3, ovate family protein 3 |
-0.49 | 0.32 | -0.33 | ||
37 | AT5G54000 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
-0.49 | 0.34 | -0.32 | |||
38 | AT5G45710 | winged-helix DNA-binding transcription factor family protein |
HEAT SHOCK TRANSCRIPTION FACTOR A4C, HEAT SHOCK TRANSCRIPTION FACTOR A4C, ROOT HANDEDNESS 1 |
0.49 | 0.3 | -0.29 | ||
39 | AT5G46660 | protein kinase C-like zinc finger protein | 0.49 | 0.32 | -0.29 | |||
40 | AT3G43820 | pseudogene, copper amine oxidase protein family, similar to SP|Q43077 Amine oxidase (copper-containing) precursor (EC 1.4.3.6) {Pisum sativum}; contains Pfam profile PF01179: Copper amine oxidase, enzyme domain; blastp match of 57% identity and 2.6e-48 P-value to GP|5733089|gb|AAD49420.1|AF172681_1|AF172681 amine oxidase {Canavalia lineata} |
0.49 | 0.32 | -0.31 | |||
41 | AT4G36510 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.49 | 0.31 | -0.34 | |||
42 | AT5G55750 | hydroxyproline-rich glycoprotein family protein | 0.49 | 0.31 | -0.33 | |||
43 | AT5G51360 | Transcription elongation factor (TFIIS) family protein | 0.48 | 0.3 | -0.33 | |||
44 | AT2G16250 | Leucine-rich repeat protein kinase family protein | -0.48 | 0.31 | -0.32 | |||
45 | AT2G36020 | HVA22-like protein J | HVA22-like protein J | -0.48 | 0.31 | -0.32 | ||
46 | AT2G45580 | cytochrome P450, family 76, subfamily C, polypeptide 3 | cytochrome P450, family 76, subfamily C, polypeptide 3 |
-0.48 | 0.31 | -0.3 | ||
47 | AT3G24130 | Pectin lyase-like superfamily protein | 0.47 | 0.3 | -0.32 | |||
48 | AT5G62830 | F-box associated ubiquitination effector family protein | 0.46 | 0.32 | -0.33 | |||
49 | AT3G07830 | Pectin lyase-like superfamily protein | -0.46 | 0.34 | -0.3 | |||
50 | AT3G53910 | malate dehydrogenase-related | -0.46 | 0.32 | -0.31 | |||
51 | AT2G04890 | SCARECROW-like 21 | SCARECROW-like 21 | -0.46 | 0.35 | -0.28 | ||
52 | AT1G09370 | Plant invertase/pectin methylesterase inhibitor superfamily protein |
0.46 | 0.32 | -0.31 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
53 | C0192 | Oxalic acid | - | Oxalate | ascorbate degradation | -0.74 | 0.43 | -0.45 | ||
54 | C0059 | Arginine amide | - | - | - | -0.68 | 0.43 | -0.45 | ||
55 | C0006 | β-Homothreonine | L-β-Homothreonine | - | - | -0.68 | 0.45 | -0.43 | ||
56 | C0191 | Ornithine | D,L-Ornithine | L-Ornithine | arginine degradation I (arginase pathway), urea cycle, ornithine biosynthesis, proline biosynthesis III, arginine degradation VI (arginase 2 pathway), arginine biosynthesis II (acetyl cycle), citrulline biosynthesis, L-Ndelta-acetylornithine biosynthesis, arginine biosynthesis I, citrulline degradation |
-0.48 | 0.33 | -0.31 | ||
57 | C0013 | N2-Acetyl-Ornithine | N2-Acetyl-L-ornithine | N-acetyl-L-ornithine | arginine biosynthesis II (acetyl cycle), ornithine biosynthesis |
-0.48 | 0.3 | -0.31 |