AT1G22860 : -
Query Information
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AGICode AT1G22860
Description Vacuolar sorting protein 39
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G22860 Vacuolar sorting protein 39 1 0.32 -0.3
2 AT2G17975 zinc finger (Ran-binding) family protein 0.74 0.32 -0.31
3 AT2G13150 Basic-leucine zipper (bZIP) transcription factor family
protein		 -0.71 0.33 -0.31
4 AT5G35180 Protein of unknown function (DUF1336) 0.71 0.31 -0.31
5 AT2G36720 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger domain		 0.7 0.31 -0.32
6 AT4G30900 DNAse I-like superfamily protein 0.7 0.3 -0.31
7 AT3G56300 Cysteinyl-tRNA synthetase, class Ia family protein 0.69 0.33 -0.34
8 AT3G21810 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.69 0.3 -0.32
9 AT3G53090 ubiquitin-protein ligase 7 ubiquitin-protein ligase 7 0.68 0.33 -0.33
10 AT1G64910 UDP-Glycosyltransferase superfamily protein -0.68 0.3 -0.33
11 AT2G15860 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 13 growth stages; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.67 0.32 -0.33
12 AT5G08440 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G23490.1); Has 141 Blast
hits to 139 proteins in 35 species: Archae - 0; Bacteria -
9; Metazoa - 21; Fungi - 6; Plants - 94; Viruses - 0; Other
Eukaryotes - 11 (source: NCBI BLink).		 0.67 0.32 -0.32
13 AT1G61750 Receptor-like protein kinase-related family protein -0.67 0.3 -0.34
14 AT5G20380 phosphate transporter 4;5 phosphate transporter 4;5 0.67 0.3 -0.31
15 AT4G02430 RNA-binding (RRM/RBD/RNP motifs) family protein Serine/Arginine-Rich Protein
Splicing Factor 34b,
Serine/Arginine-Rich Protein
Splicing Factor 34b		 0.67 0.29 -0.31
16 AT1G19485 Transducin/WD40 repeat-like superfamily protein 0.67 0.31 -0.31
17 AT5G19660 SITE-1 protease SITE-1 PROTEASE, ATSBT6.1, SITE-1
protease		 0.66 0.3 -0.31
18 AT3G11620 alpha/beta-Hydrolases superfamily protein 0.66 0.3 -0.31
19 AT2G41580 transposable element gene -0.66 0.33 -0.33
20 AT1G50950 Thioredoxin protein with domain of unknown function
(DUF1692)		 0.66 0.31 -0.28
21 AT2G22270 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G39860.2); Has 247 Blast hits
to 231 proteins in 42 species: Archae - 0; Bacteria - 17;
Metazoa - 14; Fungi - 5; Plants - 145; Viruses - 0; Other
Eukaryotes - 66 (source: NCBI BLink).		 -0.66 0.32 -0.33
22 AT1G74840 Homeodomain-like superfamily protein -0.66 0.31 -0.31
23 AT1G70620 cyclin-related 0.66 0.34 -0.3
24 AT2G04230 FBD, F-box and Leucine Rich Repeat domains containing
protein		 0.65 0.32 -0.32
25 AT3G48370 transposable element gene -0.65 0.34 -0.31
26 AT1G16710 histone acetyltransferase of the CBP family 12 histone acetyltransferase of the
CBP family 12		 0.65 0.3 -0.31
27 AT5G25560 CHY-type/CTCHY-type/RING-type Zinc finger protein 0.64 0.34 -0.32
28 AT3G57570 ARM repeat superfamily protein 0.64 0.31 -0.33
29 AT1G15750 Transducin family protein / WD-40 repeat family protein TOPLESS, WUS-INTERACTING PROTEIN 1 0.64 0.32 -0.3
30 AT2G22600 RNA-binding KH domain-containing protein -0.64 0.3 -0.32
31 AT5G02690 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 11 plant structures;
EXPRESSED DURING: 9 growth stages; Has 2 Blast hits to 2
proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.64 0.29 -0.32
32 AT2G46560 transducin family protein / WD-40 repeat family protein 0.64 0.3 -0.3
33 AT1G64570 Homeodomain-like superfamily protein DUO POLLEN 3 0.64 0.35 -0.32
34 AT5G02260 expansin A9 ATEXP9, expansin A9, ATHEXP ALPHA
1.10, EXP9, expansin A9		 -0.63 0.29 -0.31
35 AT5G25500 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.63 0.32 -0.32
36 AT4G20060 ARM repeat superfamily protein EMBRYO DEFECTIVE 1895 0.63 0.29 -0.32
37 AT4G39560 Galactose oxidase/kelch repeat superfamily protein 0.63 0.32 -0.3
38 AT5G07430 Pectin lyase-like superfamily protein -0.63 0.31 -0.32
39 AT1G18970 germin-like protein 4 germin-like protein 4 -0.63 0.33 -0.3
40 AT1G17890 NAD(P)-binding Rossmann-fold superfamily protein GER2 -0.63 0.31 -0.31
41 AT1G42630 transposable element gene -0.62 0.3 -0.34
42 AT1G48900 Signal recognition particle, SRP54 subunit protein -0.62 0.29 -0.31
43 AT3G29390 RS2-interacting KH protein RS2-interacting KH protein 0.62 0.3 -0.31
44 AT5G15540 PHD finger family protein ARABIDOPSIS THALIANA
SISTER-CHROMATID COHESION 2,
EMBRYO DEFECTIVE 2773,
SISTER-CHROMATID COHESION 2		 0.62 0.3 -0.33
45 AT3G19920 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G64230.1); Has 217 Blast hits
to 217 proteins in 16 species: Archae - 0; Bacteria - 2;
Metazoa - 0; Fungi - 0; Plants - 215; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.62 0.3 -0.3
46 AT5G64710 Putative endonuclease or glycosyl hydrolase -0.62 0.32 -0.32
47 AT3G20620 F-box family protein-related 0.62 0.31 -0.32
48 AT1G50250 FTSH protease 1 FTSH protease 1 0.62 0.31 -0.33
49 AT2G17640 Trimeric LpxA-like enzymes superfamily protein ATSERAT3;1, SERINE
ACETYLTRANSFERASE 106		 0.62 0.33 -0.33
50 AT4G03205 Coproporphyrinogen III oxidase hemf2 0.62 0.31 -0.32
51 AT2G39580 CONTAINS InterPro DOMAIN/s: Putative zinc-finger domain
(InterPro:IPR019607); Has 249 Blast hits to 219 proteins in
85 species: Archae - 0; Bacteria - 144; Metazoa - 29; Fungi
- 8; Plants - 50; Viruses - 0; Other Eukaryotes - 18
(source: NCBI BLink).		 0.62 0.31 -0.33
52 AT1G73990 signal peptide peptidase signal peptide peptidase, SPPA1 0.62 0.31 -0.32
53 AT5G08210 MIR834a; miRNA microRNA834A 0.62 0.31 -0.31
54 AT2G27900 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein
sorting-associated protein 54 (InterPro:IPR019515); Has 316
Blast hits to 252 proteins in 92 species: Archae - 0;
Bacteria - 2; Metazoa - 200; Fungi - 2; Plants - 68;
Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).		 0.62 0.32 -0.3
55 AT3G32060 transposable element gene -0.62 0.3 -0.3
56 AT5G09410 ethylene induced calmodulin binding protein calmodulin-binding transcription
activator 1, ethylene induced
calmodulin binding protein		 0.62 0.32 -0.32
57 AT4G04740 calcium-dependent protein kinase 23 ATCPK23, calcium-dependent protein
kinase 23		 0.61 0.32 -0.32
58 AT3G02940 myb domain protein 107 myb domain protein 107, myb domain
protein 107		 -0.61 0.29 -0.31
59 AT4G18920 Protein of unknown function (DUF1264) -0.61 0.3 -0.33
60 AT1G62920 CONTAINS InterPro DOMAIN/s: Proteasome maturation factor
UMP1 (InterPro:IPR008012); BEST Arabidopsis thaliana
protein match is: Proteasome maturation factor UMP1
(TAIR:AT1G67250.1); Has 70 Blast hits to 70 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.61 0.33 -0.32
61 AT1G20270 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.61 0.28 -0.32
62 AT2G25660 embryo defective 2410 embryo defective 2410 0.61 0.32 -0.29
63 AT2G37980 O-fucosyltransferase family protein -0.61 0.29 -0.31
64 AT4G16510 YbaK/aminoacyl-tRNA synthetase-associated domain -0.61 0.3 -0.32
65 AT5G56320 expansin A14 ATEXP14, expansin A14, ATHEXP
ALPHA 1.5, EXPANSIN 14, expansin
A14		 -0.61 0.31 -0.33
66 AT5G44750 DNA-directed DNA polymerases ARABIDOPSIS THALIANA HOMOLOG OF
REVERSIONLESS 1, REV1		 0.6 0.33 -0.31
67 AT4G23980 auxin response factor 9 auxin response factor 9 0.6 0.32 -0.31
68 AT1G33400 Tetratricopeptide repeat (TPR)-like superfamily protein tetratricopeptide repeat 9 0.6 0.32 -0.33
69 AT3G27440 uridine kinase-like 5 uridine kinase-like 5 -0.6 0.31 -0.31
70 AT2G14850 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G33890.2); Has 140 Blast hits
to 132 proteins in 17 species: Archae - 0; Bacteria - 0;
Metazoa - 1; Fungi - 2; Plants - 133; Viruses - 0; Other
Eukaryotes - 4 (source: NCBI BLink).		 0.6 0.3 -0.29
71 AT4G11850 phospholipase D gamma 1 maternal effect embryo arrest 54,
phospholipase D gamma 1		 -0.6 0.29 -0.33
72 AT3G55850 Amidohydrolase family LONG AFTER FAR-RED 3, LONG AFTER
FAR-RED 3 ISOFORM 1, LAF3 ISOFORM
2		 0.6 0.31 -0.33
73 AT2G25170 chromatin remodeling factor CHD3 (PICKLE) CHD3, CHR6,
CYTOKININ-HYPERSENSITIVE 2,
GYMNOS, PICKLE, SUPPRESSOR OF SLR
2		 0.59 0.33 -0.31
74 AT2G40620 Basic-leucine zipper (bZIP) transcription factor family
protein		 -0.59 0.31 -0.31
75 AT4G00040 Chalcone and stilbene synthase family protein 0.59 0.32 -0.3
76 AT5G35930 AMP-dependent synthetase and ligase family protein 0.59 0.34 -0.3
77 AT3G28380 P-glycoprotein 17 ATP-binding cassette B17,
P-glycoprotein 17		 -0.59 0.33 -0.31
78 AT1G79820 Major facilitator superfamily protein SUPPRESSOR OF G PROTEIN BETA1 0.59 0.32 -0.32
79 AT1G32300 D-arabinono-1,4-lactone oxidase family protein -0.59 0.32 -0.31
80 AT2G37650 GRAS family transcription factor 0.59 0.32 -0.3
81 AT2G16820 transposable element gene -0.59 0.3 -0.34
82 AT3G06290 SAC3/GANP/Nin1/mts3/eIF-3 p25 family AtSAC3B, yeast Sac3 homolog B 0.59 0.31 -0.31
83 AT4G32660 Protein kinase superfamily protein AME3 0.59 0.31 -0.31
84 AT1G49560 Homeodomain-like superfamily protein -0.59 0.32 -0.32
85 AT2G42930 Carbohydrate-binding X8 domain superfamily protein -0.59 0.29 -0.35
86 AT3G25420 serine carboxypeptidase-like 21 serine carboxypeptidase-like 21 -0.59 0.32 -0.31
87 AT3G03360 F-box/RNI-like superfamily protein 0.59 0.31 -0.3
88 AT5G02680 LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: methionine--tRNA
ligase, putative / methionyl-tRNA synthetase, putative /
MetRS, putative (TAIR:AT4G13780.1); Has 252 Blast hits to
252 proteins in 89 species: Archae - 0; Bacteria - 71;
Metazoa - 93; Fungi - 0; Plants - 74; Viruses - 0; Other
Eukaryotes - 14 (source: NCBI BLink).		 0.59 0.31 -0.31
89 AT1G54240 winged-helix DNA-binding transcription factor family
protein		 -0.59 0.32 -0.32
90 AT2G10020 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.59 0.32 -0.33
91 AT1G23240 Caleosin-related family protein -0.59 0.32 -0.3
92 AT2G14380 transposable element gene -0.58 0.29 -0.31
93 AT5G45610 protein dimerizations SENSITIVE TO UV 2 0.58 0.3 -0.31
94 AT3G54060 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G37960.2); Has 455 Blast hits
to 322 proteins in 98 species: Archae - 0; Bacteria - 178;
Metazoa - 88; Fungi - 75; Plants - 28; Viruses - 2; Other
Eukaryotes - 84 (source: NCBI BLink).		 0.58 0.32 -0.3
95 AT1G34480 Cysteine/Histidine-rich C1 domain family protein 0.58 0.31 -0.31
96 AT4G31280 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.58 0.33 -0.35
97 AT1G20700 WUSCHEL related homeobox 14 WUSCHEL RELATED HOMEOBOX 14,
WUSCHEL related homeobox 14		 -0.58 0.3 -0.32
98 AT1G65810 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.58 0.3 -0.32
99 AT1G69810 WRKY DNA-binding protein 36 ATWRKY36, WRKY DNA-binding protein
36		 -0.58 0.33 -0.31
100 AT5G24970 Protein kinase superfamily protein 0.58 0.31 -0.34
101 AT4G03850 transposable element gene -0.58 0.32 -0.33
102 AT1G60270 beta glucosidase 6 beta glucosidase 6 0.58 0.35 -0.3
103 AT2G38900 Serine protease inhibitor, potato inhibitor I-type family
protein		 0.58 0.32 -0.32
104 AT1G27520 Glycosyl hydrolase family 47 protein 0.58 0.31 -0.32
105 AT1G01450 Protein kinase superfamily protein 0.58 0.3 -0.35
106 AT2G27900 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein
sorting-associated protein 54 (InterPro:IPR019515); Has 316
Blast hits to 252 proteins in 92 species: Archae - 0;
Bacteria - 2; Metazoa - 200; Fungi - 2; Plants - 68;
Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).		 0.58 0.33 -0.32
107 AT4G18250 receptor serine/threonine kinase, putative -0.57 0.32 -0.31
108 AT1G21430 Flavin-binding monooxygenase family protein YUC11 0.57 0.3 -0.33
109 AT3G06210 ARM repeat superfamily protein 0.57 0.32 -0.34
110 AT3G47660 Regulator of chromosome condensation (RCC1) family protein -0.57 0.32 -0.33
111 AT4G01700 Chitinase family protein -0.57 0.32 -0.31
112 AT4G09840 unknown protein; Has 25 Blast hits to 25 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 4;
Plants - 9; Viruses - 3; Other Eukaryotes - 5 (source: NCBI
BLink).		 0.57 0.32 -0.32
113 AT3G16220 Predicted eukaryotic LigT 0.57 0.32 -0.34
114 AT5G24110 WRKY DNA-binding protein 30 ARABIDOPSIS THALIANA WRKY
DNA-BINDING PROTEIN 30, WRKY
DNA-binding protein 30		 -0.57 0.31 -0.32
115 AT5G55060 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 25 plant
structures; EXPRESSED DURING: 15 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G58510.1); Has 223 Blast hits to 218 proteins in
80 species: Archae - 0; Bacteria - 2; Metazoa - 117; Fungi
- 6; Plants - 65; Viruses - 0; Other Eukaryotes - 33
(source: NCBI BLink).		 0.57 0.33 -0.32
116 AT5G22720 F-box/RNI-like superfamily protein 0.57 0.31 -0.32
117 AT5G44150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED
DURING: 13 growth stages; Has 35333 Blast hits to 34131
proteins in 2444 species: Archae - 798; Bacteria - 22429;
Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0;
Other Eukaryotes - 9610 (source: NCBI BLink).		 0.57 0.3 -0.31
118 AT3G14090 exocyst subunit exo70 family protein D3 exocyst subunit exo70 family
protein D3, exocyst subunit exo70
family protein D3		 -0.57 0.33 -0.3
119 AT4G14590 embryo defective 2739 embryo defective 2739 -0.57 0.32 -0.32
120 AT2G47830 Cation efflux family protein 0.57 0.3 -0.31
121 AT5G59040 copper transporter 3 copper transporter 3 0.57 0.32 -0.32
122 AT2G41810 Protein of unknown function, DUF642 -0.57 0.31 -0.32
123 AT3G59440 Calcium-binding EF-hand family protein -0.57 0.32 -0.33
124 AT3G56110 prenylated RAB acceptor 1.B1 prenylated RAB acceptor 1.B1 -0.57 0.31 -0.32
125 AT5G05310 TLC ATP/ADP transporter 0.57 0.3 -0.32
126 AT3G56550 Pentatricopeptide repeat (PPR) superfamily protein 0.57 0.31 -0.32
127 AT1G75250 RAD-like 6 RAD-like 6, RAD-like 6,
RADIALIS-LIKE SANT/MYB 3		 -0.57 0.33 -0.33
128 AT5G28560 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
vacuole; Has 0 Blast hits to 0 proteins in 0 species
(source: NCBI BLink).		 -0.57 0.32 -0.34
129 AT1G18280 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.56 0.3 -0.33
130 AT2G21930 F-box associated ubiquitination effector family protein -0.56 0.32 -0.33
131 AT1G52660 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.56 0.31 -0.31
132 AT1G49270 Protein kinase superfamily protein proline-rich extensin-like
receptor kinase 7, proline-rich
extensin-like receptor kinase 7		 -0.56 0.31 -0.31
133 AT4G31020 alpha/beta-Hydrolases superfamily protein -0.56 0.32 -0.31
134 AT3G20990 transposable element gene -0.56 0.32 -0.32
135 AT4G25610 C2H2-like zinc finger protein -0.56 0.32 -0.32
136 AT1G58330 transcription factor-related ZW2 -0.56 0.31 -0.32
137 AT1G14540 Peroxidase superfamily protein -0.56 0.3 -0.33
138 AT1G14750 Cyclin family protein SOLO DANCERS -0.56 0.32 -0.32
139 AT1G61620 phosphoinositide binding -0.56 0.33 -0.31
140 AT2G26410 IQ-domain 4 IQ-domain 4 -0.56 0.3 -0.31