AT1G08620 : PKDM7D
Query Information
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AGICode AT1G08620
Description Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G08620 Transcription factor jumonji (jmj) family protein / zinc
finger (C5HC2 type) family protein		 PKDM7D 1 0.3 -0.32
2 AT1G07880 Protein kinase superfamily protein ATMPK13 -0.84 0.32 -0.34
3 AT4G15930 Dynein light chain type 1 family protein -0.8 0.32 -0.32
4 AT3G02260 auxin transport protein (BIG) ATTENUATED SHADE AVOIDANCE 1, BIG,
CORYMBOSA1, DARK OVER-EXPRESSION
OF CAB 1, LOW PHOSPHATE-RESISTANT
ROOT 1, TRANSPORT INHIBITOR
RESPONSE 3, UMBRELLA 1		 0.78 0.32 -0.33
5 AT5G57440 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 GLYCEROL-3-PHOSPHATASE 2, GS1 -0.78 0.33 -0.31
6 AT5G16680 RING/FYVE/PHD zinc finger superfamily protein 0.77 0.3 -0.31
7 AT1G73655 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 -0.77 0.33 -0.34
8 AT1G09960 sucrose transporter 4 SUCROSE TRANSPORTER 4, SUCROSE
TRANSPORTER 4, SUCROSE TRANSPORTER
4, sucrose transporter 4		 0.77 0.33 -0.3
9 AT4G18370 DEGP protease 5 DEGP protease 5, DEGP PROTEASE 5,
PROTEASE HHOA PRECUSOR		 -0.76 0.29 -0.31
10 AT4G22560 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G12450.1); Has 380 Blast hits
to 380 proteins in 21 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 6; Plants - 374; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.76 0.31 -0.31
11 AT1G17480 IQ-domain 7 IQ-domain 7 -0.75 0.29 -0.33
12 AT4G11670 Protein of unknown function (DUF810) 0.75 0.33 -0.32
13 AT3G23805 ralf-like 24 ralf-like 24 -0.75 0.31 -0.35
14 AT5G43450 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.75 0.31 -0.3
15 AT3G55270 mitogen-activated protein kinase phosphatase 1 ARABIDOPSIS MITOGEN-ACTIVATED
PROTEIN KINASE PHOSPHATASE 1,
mitogen-activated protein kinase
phosphatase 1		 0.75 0.29 -0.3
16 AT5G35900 LOB domain-containing protein 35 LOB domain-containing protein 35 -0.74 0.31 -0.34
17 AT1G53290 Galactosyltransferase family protein -0.74 0.33 -0.31
18 AT5G10400 Histone superfamily protein -0.74 0.31 -0.3
19 AT3G62240 RING/U-box superfamily protein 0.74 0.31 -0.31
20 AT3G11910 ubiquitin-specific protease 13 AtUBP13, ubiquitin-specific
protease 13		 0.74 0.31 -0.33
21 AT2G20320 DENN (AEX-3) domain-containing protein 0.74 0.32 -0.3
22 ATMG00640 hydrogen ion transporting ATP synthases, rotational
mechanism;zinc ion binding		 ORF25 0.74 0.32 -0.3
23 AT1G12250 Pentapeptide repeat-containing protein -0.73 0.31 -0.32
24 AT4G35020 RAC-like 3 RAC-like 3, ATROP6, RAC-like 3,
RHO1PS, RHO-RELATED PROTEIN FROM
PLANTS 6		 -0.73 0.32 -0.32
25 AT5G20030 Plant Tudor-like RNA-binding protein -0.73 0.33 -0.33
26 AT1G72700 ATPase E1-E2 type family protein / haloacid
dehalogenase-like hydrolase family protein		 0.73 0.3 -0.3
27 AT5G16870 Peptidyl-tRNA hydrolase II (PTH2) family protein -0.73 0.32 -0.32
28 AT3G27870 ATPase E1-E2 type family protein / haloacid
dehalogenase-like hydrolase family protein		 0.73 0.34 -0.32
29 AT2G42120 DNA polymerase delta small subunit DNA polymerase delta small subunit -0.72 0.29 -0.33
30 AT1G78370 glutathione S-transferase TAU 20 glutathione S-transferase TAU 20,
glutathione S-transferase TAU 20		 -0.72 0.33 -0.32
31 AT1G03475 Coproporphyrinogen III oxidase ATCPO-I, HEMF1, LESION INITIATION
2		 -0.72 0.32 -0.31
32 AT1G20340 Cupredoxin superfamily protein DNA-DAMAGE-REPAIR/TOLERATION
PROTEIN 112, PLASTOCYANIN 2		 -0.72 0.32 -0.32
33 AT1G21480 Exostosin family protein -0.72 0.29 -0.31
34 AT5G24165 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G23885.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.72 0.32 -0.3
35 AT1G04640 lipoyltransferase 2 lipoyltransferase 2 -0.72 0.32 -0.31
36 AT1G22940 thiamin biosynthesis protein, putative TH-1, THIAMINE REQUIRING 1,
THIAMINEE		 -0.72 0.32 -0.31
37 AT1G79710 Major facilitator superfamily protein 0.72 0.31 -0.31
38 AT1G23230 CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23
(InterPro:IPR021629); Has 187 Blast hits to 184 proteins in
67 species: Archae - 0; Bacteria - 0; Metazoa - 135; Fungi
- 0; Plants - 43; Viruses - 0; Other Eukaryotes - 9
(source: NCBI BLink).		 0.72 0.33 -0.31
39 AT2G24970 unknown protein; Has 33 Blast hits to 33 proteins in 17
species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0;
Plants - 28; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 -0.72 0.33 -0.29
40 AT4G30620 Uncharacterised BCR, YbaB family COG0718 -0.72 0.32 -0.31
41 AT3G46490 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.72 0.29 -0.29
42 AT3G14760 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 6 plant structures;
EXPRESSED DURING: LP.04 four leaves visible, LP.02 two
leaves visible; Has 63 Blast hits to 63 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.71 0.32 -0.31
43 AT4G15790 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; Has 411 Blast hits to
380 proteins in 121 species: Archae - 4; Bacteria - 107;
Metazoa - 85; Fungi - 29; Plants - 59; Viruses - 0; Other
Eukaryotes - 127 (source: NCBI BLink).		 -0.71 0.34 -0.32
44 AT3G20790 NAD(P)-binding Rossmann-fold superfamily protein -0.71 0.32 -0.29
45 AT2G27390 proline-rich family protein 0.71 0.3 -0.32
46 AT4G16800 ATP-dependent caseinolytic (Clp) protease/crotonase family
protein		 -0.71 0.31 -0.29
47 AT5G53940 Yippee family putative zinc-binding protein -0.71 0.3 -0.3
48 AT1G78610 mechanosensitive channel of small conductance-like 6 mechanosensitive channel of small
conductance-like 6		 0.71 0.34 -0.34
49 AT4G17240 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED
DURING: 8 growth stages; Has 1142 Blast hits to 1055
proteins in 252 species: Archae - 22; Bacteria - 318;
Metazoa - 248; Fungi - 96; Plants - 59; Viruses - 3; Other
Eukaryotes - 396 (source: NCBI BLink).		 -0.71 0.32 -0.32
50 AT1G73110 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.71 0.33 -0.32
51 AT1G08470 strictosidine synthase-like 3 strictosidine synthase-like 3 -0.71 0.33 -0.31
52 AT4G38600 HEAT repeat ;HECT-domain (ubiquitin-transferase) KAKTUS, UBIQUITIN-PROTEIN LIGASE 3 0.71 0.33 -0.31
53 AT2G46570 laccase 6 laccase 6 -0.71 0.3 -0.35
54 AT3G45050 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 26 Blast hits to 26 proteins
in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.71 0.31 -0.3
55 AT1G80560 isopropylmalate dehydrogenase 2 ARABIDOPSIS ISOPROPYLMALATE
DEHYDROGENASE 2, isopropylmalate
dehydrogenase 2		 -0.7 0.31 -0.3
56 AT5G27720 Small nuclear ribonucleoprotein family protein embryo defective 1644, SM-like
protein 4		 -0.7 0.3 -0.31
57 AT3G62370 heme binding -0.7 0.33 -0.31
58 AT4G09550 AtGCP3 interacting protein 1 ARABIDOPSIS ATGCP3 INTERACTING
PROTEIN 1, AtGCP3 interacting
protein 1		 -0.7 0.31 -0.31
59 AT4G14570 acylaminoacyl-peptidase-related acylamino acid-releasing enzyme,
AtAARE		 -0.7 0.31 -0.32
60 AT2G32980 unknown protein; Has 158 Blast hits to 154 proteins in 73
species: Archae - 0; Bacteria - 61; Metazoa - 0; Fungi - 0;
Plants - 55; Viruses - 28; Other Eukaryotes - 14 (source:
NCBI BLink).		 -0.7 0.3 -0.32
61 AT3G14270 phosphatidylinositol-4-phosphate 5-kinase family protein FORMS APLOID AND BINUCLEATE CELLS
1B		 0.7 0.3 -0.32
62 AT1G32490 RNA helicase family protein EMBRYO DEFECTIVE 2733, ENHANCED
SILENCING PHENOTYPE 3		 0.7 0.32 -0.32
63 AT1G07510 FTSH protease 10 FTSH protease 10 0.7 0.31 -0.3
64 AT3G26650 glyceraldehyde 3-phosphate dehydrogenase A subunit glyceraldehyde 3-phosphate
dehydrogenase A subunit,
GLYCERALDEHYDE 3-PHOSPHATE
DEHYDROGENASE A SUBUNIT 1		 -0.7 0.32 -0.32
65 AT1G04530 Tetratricopeptide repeat (TPR)-like superfamily protein tetratricopeptide repeat 4 -0.7 0.31 -0.32
66 AT4G35760 NAD(P)H dehydrogenase (quinone)s -0.7 0.34 -0.31
67 AT5G28510 beta glucosidase 24 beta glucosidase 24 0.7 0.34 -0.31
68 AT5G43130 TBP-associated factor 4 TBP-associated factor 4,
TBP-associated factor 4B		 0.7 0.32 -0.3
69 AT1G52290 Protein kinase superfamily protein proline-rich extensin-like
receptor kinase 15, proline-rich
extensin-like receptor kinase 15		 -0.7 0.31 -0.31
70 AT3G23790 AMP-dependent synthetase and ligase family protein acyl activating enzyme 16 0.7 0.32 -0.3
71 AT5G35480 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.69 0.31 -0.31
72 AT2G03780 Translin family protein -0.69 0.32 -0.33
73 AT4G29790 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G19390.1); Has 538 Blast hits
to 357 proteins in 124 species: Archae - 0; Bacteria - 74;
Metazoa - 109; Fungi - 58; Plants - 105; Viruses - 2; Other
Eukaryotes - 190 (source: NCBI BLink).		 0.69 0.32 -0.29
74 AT5G51950 Glucose-methanol-choline (GMC) oxidoreductase family
protein		 -0.69 0.33 -0.3
75 AT2G42380 Basic-leucine zipper (bZIP) transcription factor family
protein		 ATBZIP34, BZIP34 -0.69 0.29 -0.32
76 AT2G11520 calmodulin-binding receptor-like cytoplasmic kinase 3 calmodulin-binding receptor-like
cytoplasmic kinase 3		 0.69 0.33 -0.34
77 AT2G37470 Histone superfamily protein -0.69 0.31 -0.31
78 AT4G23730 Galactose mutarotase-like superfamily protein -0.69 0.34 -0.31
79 AT2G46210 Fatty acid/sphingolipid desaturase AtSLD2, sphingoid LCB desaturase 2 -0.69 0.32 -0.31
80 AT2G29190 pumilio 2 pumilio 2, pumilio 2 0.69 0.3 -0.32
81 AT5G10160 Thioesterase superfamily protein -0.69 0.31 -0.33
82 AT1G61140 SNF2 domain-containing protein / helicase domain-containing
protein / zinc finger protein-related		 embryo sac development arrest 16 0.69 0.29 -0.31
83 AT5G28770 bZIP transcription factor family protein Arabidopsis thaliana basic leucine
zipper 63, BZO2H3		 -0.68 0.3 -0.3
84 AT1G52670 Single hybrid motif superfamily protein -0.68 0.33 -0.33
85 AT1G78530 Protein kinase superfamily protein -0.68 0.31 -0.33
86 AT3G04740 RNA polymerase II transcription mediators ARABIDOPSIS MEDIATOR COMPONENTS
14, MEDIATOR COMPONENTS 14,
STRUWWELPETER		 0.68 0.3 -0.31
87 AT1G18170 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 -0.68 0.31 -0.32
88 AT4G30330 Small nuclear ribonucleoprotein family protein -0.68 0.3 -0.32
89 AT1G71020 ARM repeat superfamily protein -0.68 0.33 -0.32
90 AT1G63720 BEST Arabidopsis thaliana protein match is:
hydroxyproline-rich glycoprotein family protein
(TAIR:AT5G52430.1); Has 490 Blast hits to 394 proteins in
96 species: Archae - 0; Bacteria - 2; Metazoa - 132; Fungi
- 88; Plants - 175; Viruses - 14; Other Eukaryotes - 79
(source: NCBI BLink).		 0.68 0.32 -0.3
91 AT3G57080 Eukaryotic rpb5 RNA polymerase subunit family protein NRPE5, RNA POLYMERASE II FIFTH
LARGEST SUBUNIT, B		 -0.68 0.31 -0.32
92 AT4G17140 pleckstrin homology (PH) domain-containing protein 0.68 0.32 -0.29
93 AT5G38970 brassinosteroid-6-oxidase 1 ATBR6OX,
BRASSINOSTEROID-6-OXIDASE,
brassinosteroid-6-oxidase 1,
CYP85A1		 -0.68 0.34 -0.31
94 AT1G11390 Protein kinase superfamily protein 0.68 0.32 -0.31
95 AT1G50030 target of rapamycin target of rapamycin 0.68 0.31 -0.33
96 AT3G25805 unknown protein; Has 98 Blast hits to 98 proteins in 45
species: Archae - 0; Bacteria - 51; Metazoa - 0; Fungi - 0;
Plants - 43; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 -0.68 0.31 -0.32
97 AT5G65580 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: flower; EXPRESSED
DURING: petal differentiation and expansion stage; Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.68 0.3 -0.32
98 AT1G68690 Protein kinase superfamily protein proline-rich extensin-like
receptor kinase 9, proline-rich
extensin-like receptor kinase 9		 0.67 0.31 -0.32
99 AT2G43860 Pectin lyase-like superfamily protein 0.67 0.31 -0.31
100 AT5G04160 Nucleotide-sugar transporter family protein -0.67 0.31 -0.32
101 AT5G13840 FIZZY-related 3 FIZZY-related 3 -0.67 0.3 -0.32
102 AT3G13390 SKU5 similar 11 SKU5 similar 11 -0.67 0.31 -0.32
103 AT2G35450 catalytics;hydrolases -0.67 0.3 -0.31
104 AT1G72170 Domain of unknown function (DUF543) -0.67 0.32 -0.3
105 AT1G63770 Peptidase M1 family protein 0.67 0.31 -0.33
106 AT2G43560 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 -0.67 0.31 -0.3
107 AT4G39756 Galactose oxidase/kelch repeat superfamily protein -0.67 0.32 -0.32
108 AT3G60370 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 -0.67 0.32 -0.33
109 AT4G16155 dihydrolipoyl dehydrogenases -0.67 0.32 -0.33
110 AT3G25530 glyoxylate reductase 1 ATGHBDH, GHBDH, glyoxylate
reductase 1, GLYOXYLATE REDUCTASE
1		 -0.67 0.33 -0.34
111 AT4G34490 cyclase associated protein 1 cyclase associated protein 1, CAP
1, cyclase associated protein 1		 -0.67 0.32 -0.31
112 AT2G20930 SNARE-like superfamily protein -0.67 0.31 -0.32
113 AT4G08300 nodulin MtN21 /EamA-like transporter family protein -0.67 0.32 -0.32
114 AT1G75980 Single hybrid motif superfamily protein -0.67 0.31 -0.32
115 AT5G23550 Got1/Sft2-like vescicle transport protein family -0.67 0.31 -0.33
116 AT5G48590 Protein of unknown function (DUF760) -0.67 0.31 -0.3
117 AT5G40340 Tudor/PWWP/MBT superfamily protein 0.66 0.29 -0.32
118 AT2G16485 nucleic acid binding;zinc ion binding;DNA binding 0.66 0.31 -0.3
119 AT2G22010 related to KPC1 related to KPC1 0.66 0.31 -0.32
120 AT3G29180 Protein of unknown function (DUF1336) 0.65 0.3 -0.32
121 AT3G54670 Structural maintenance of chromosomes (SMC) family protein ATSMC1, STRUCTURAL MAINTENANCE OF
CHROMOSOMES 1, TITAN8		 0.65 0.3 -0.32
122 AT5G07290 MEI2-like 4 MEI2-like 4, MEI2-like 4 0.65 0.33 -0.31
123 AT5G57130 Clp amino terminal domain-containing protein 0.65 0.34 -0.33
124 AT3G05510 Phospholipid/glycerol acyltransferase family protein 0.65 0.33 -0.31
125 AT5G50380 exocyst subunit exo70 family protein F1 exocyst subunit exo70 family
protein F1, exocyst subunit exo70
family protein F1		 0.64 0.31 -0.3
126 AT1G69920 glutathione S-transferase TAU 12 ARABIDOPSIS THALIANA GLUTATHIONE
S-TRANSFERASE TAU 12, glutathione
S-transferase TAU 12		 0.64 0.33 -0.33
127 AT5G56880 unknown protein; Has 9 Blast hits to 9 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.64 0.34 -0.33
128 AT1G27595 CONTAINS InterPro DOMAIN/s: Symplekin tight junction
protein C-terminal (InterPro:IPR022075); BEST Arabidopsis
thaliana protein match is: HEAT repeat-containing protein
(TAIR:AT5G01400.1); Has 593 Blast hits to 297 proteins in
111 species: Archae - 0; Bacteria - 3; Metazoa - 139; Fungi
- 49; Plants - 57; Viruses - 0; Other Eukaryotes - 345
(source: NCBI BLink).		 0.64 0.3 -0.34
129 AT5G24320 Transducin/WD40 repeat-like superfamily protein 0.64 0.31 -0.31
130 AT3G29310 calmodulin-binding protein-related 0.64 0.3 -0.31
131 AT1G65350 ubiquitin 13 ubiquitin 13 0.64 0.33 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
132 C0144 Maltose D-Maltose α-Maltose starch degradation II 0.87 0.42 -0.43 C0144
133 C0001 α-Linolenic acid - (9,12,15)-Linolenate traumatin and (Z)-3-hexen-1-yl acetate biosynthesis,
poly-hydroxy fatty acids biosynthesis,
jasmonic acid biosynthesis 		0.83 0.44 -0.45 C0001
134 C0074 Cystine L-Cystine L-Cystine protein precursor 0.81 0.45 -0.41 C0074
135 C0018 sn-Glycerol-3-phosphate D,L-sn-Glycerol-3-phosphate sn-Glycerol-3-phosphate CDP-diacylglycerol biosynthesis II,
phosphatidylglycerol biosynthesis II (non-plastidic),
triacylglycerol biosynthesis,
glycerol degradation IV,
glycerol-3-phosphate shuttle,
a quinone + sn-glycerol-3-phosphate -> a quinol + dihydroxyacetone phosphate,
CDP-diacylglycerol biosynthesis I,
cardiolipin biosynthesis II,
phosphatidylglycerol biosynthesis I (plastidic),
sn-glycerol-3-phosphate + a ubiquinone -> a ubiquinol + dihydroxyacetone phosphate,
an electron-transfer-related quinone + sn-glycerol-3-phosphate -> an electron-transfer-related quinol + dihydroxyacetone phosphate 		-0.78 0.5 -0.44 C0018
136 C0198 Phosphatidylethanolamine-34:0 - - - 0.74 0.46 -0.46
137 C0158 MST_1480.5 - - - -0.7 0.47 -0.44
138 C0012 n-Eicosanoic acid - Arachidate fatty acid activation,
fatty acid ω-oxidation,
sporopollenin precursor biosynthesis,
acyl-ACP thioesterase pathway,
ceramide degradation,
fatty acid α-oxidation,
fatty acid ω-oxidation,
phospholipases,
triacylglycerol degradation 		0.68 0.43 -0.43 C0012
139 C0214 PR_MST_2412.1 - - - 0.64 0.43 -0.46