AT1G08840 : embryo defective 2411
Query Information
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AGICode AT1G08840
Description DNA replication helicase, putative
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G08840 DNA replication helicase, putative embryo defective 2411 1 0.33 -0.32
2 AT4G04340 ERD (early-responsive to dehydration stress) family protein 0.81 0.33 -0.33
3 AT1G18090 5'-3' exonuclease family protein 0.8 0.31 -0.32
4 AT2G02040 peptide transporter 2 ARABIDOPSIS THALIANA PEPTIDE
TRANSPORTER 2, ATPTR2-B, NITRATE
TRANSPORTER 1, peptide transporter
2, PTR2-B		 -0.79 0.32 -0.31
5 AT1G22740 RAB GTPase homolog G3B ATRABG3B, RAB7, RAB75, RAB GTPase
homolog G3B		 0.79 0.33 -0.31
6 AT3G44320 nitrilase 3 NITRILASE 3, nitrilase 3 -0.79 0.29 -0.31
7 AT1G77370 Glutaredoxin family protein -0.78 0.32 -0.3
8 AT4G04330 Chaperonin-like RbcX protein AtRbcX1, homologue of
cyanobacterial RbcX 1		 0.78 0.29 -0.32
9 AT1G73870 B-box type zinc finger protein with CCT domain 0.77 0.34 -0.32
10 AT4G29950 Ypt/Rab-GAP domain of gyp1p superfamily protein -0.77 0.32 -0.32
11 AT1G19110 inter-alpha-trypsin inhibitor heavy chain-related 0.77 0.32 -0.32
12 AT4G14430 indole-3-butyric acid response 10 ARABIDOPSIS THALIANA DELTA(3),
DELTA(2)-ENOYL COA ISOMERASE 2,
ENOYL-COA HYDRATASE/ISOMERASE B,
DELTA(3), DELTA(2)-ENOYL COA
ISOMERASE 2, indole-3-butyric acid
response 10, PEC12		 -0.77 0.33 -0.35
13 AT4G25810 xyloglucan endotransglycosylase 6 xyloglucan
endotransglucosylase/hydrolase 23,
xyloglucan endotransglycosylase 6		 -0.76 0.31 -0.31
14 AT5G64370 beta-ureidopropionase beta-ureidopropionase, PYRIMIDINE
3		 -0.76 0.31 -0.3
15 AT3G48170 aldehyde dehydrogenase 10A9 aldehyde dehydrogenase 10A9 -0.76 0.3 -0.33
16 AT2G33150 peroxisomal 3-ketoacyl-CoA thiolase 3 3-KETOACYL-COA THIOLASE 2,
PEROXISOME DEFECTIVE 1,
peroxisomal 3-ketoacyl-CoA
thiolase 3		 -0.76 0.3 -0.31
17 AT5G53620 unknown protein; INVOLVED IN: biological_process unknown;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; Has 28929 Blast hits to 19542 proteins in
1425 species: Archae - 211; Bacteria - 3079; Metazoa -
14558; Fungi - 2157; Plants - 966; Viruses - 80; Other
Eukaryotes - 7878 (source: NCBI BLink).		 0.75 0.32 -0.31
18 AT4G29490 Metallopeptidase M24 family protein -0.75 0.31 -0.31
19 AT4G27620 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 18 plant structures; EXPRESSED
DURING: 11 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G27610.3); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.75 0.29 -0.31
20 AT5G27350 Major facilitator superfamily protein SFP1 -0.75 0.33 -0.32
21 AT2G25110 stromal cell-derived factor 2-like protein precursor Arabidopsis thaliana STROMAL
CELL-DERIVED FACTOR 2-like protein
precursor, ATSDF2-LIKE, stromal
cell-derived factor 2-like protein
precursor		 -0.75 0.32 -0.32
22 AT5G58375 Methyltransferase-related protein -0.75 0.3 -0.32
23 AT4G18580 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.75 0.29 -0.3
24 AT3G10180 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.75 0.32 -0.29
25 AT2G29500 HSP20-like chaperones superfamily protein -0.74 0.32 -0.31
26 AT3G17940 Galactose mutarotase-like superfamily protein -0.74 0.33 -0.3
27 AT5G55990 calcineurin B-like protein 2 ATCBL2, calcineurin B-like protein
2		 0.74 0.31 -0.33
28 AT5G56020 Got1/Sft2-like vescicle transport protein family -0.74 0.32 -0.31
29 AT1G15670 Galactose oxidase/kelch repeat superfamily protein -0.74 0.31 -0.3
30 AT1G30360 Early-responsive to dehydration stress protein (ERD4) early-responsive to dehydration 4 0.74 0.32 -0.33
31 AT2G44440 Emsy N Terminus (ENT) domain-containing protein AtEML4, EMSY-like 4 0.73 0.31 -0.31
32 AT4G24110 unknown protein; Has 76 Blast hits to 76 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0;
Plants - 75; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.73 0.35 -0.31
33 AT2G31945 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 8 plant structures;
EXPRESSED DURING: 4 anthesis, petal differentiation and
expansion stage; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G05575.1); Has 61 Blast hits
to 61 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.73 0.32 -0.31
34 AT4G18750 Pentatricopeptide repeat (PPR) superfamily protein DEFECTIVELY ORGANIZED TRIBUTARIES
4		 0.73 0.33 -0.32
35 AT5G43020 Leucine-rich repeat protein kinase family protein 0.73 0.3 -0.32
36 AT2G43820 UDP-glucosyltransferase 74F2 Arabidopsis thaliana salicylic
acid glucosyltransferase 1, GT,
salicylic acid glucosyltransferase
1, UDP-glucose:salicylic acid
glucosyltransferase 1,
UDP-glucosyltransferase 74F2		 -0.73 0.31 -0.29
37 AT3G51840 acyl-CoA oxidase 4 acyl-CoA oxidase 4, ATG6, ATSCX -0.73 0.31 -0.35
38 AT1G23960 Protein of unknown function (DUF626) -0.73 0.33 -0.31
39 AT4G16330 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.72 0.32 -0.3
40 AT1G75220 Major facilitator superfamily protein AtERDL6, ERD6-like 6 -0.72 0.32 -0.35
41 AT1G19310 RING/U-box superfamily protein -0.72 0.31 -0.31
42 AT2G35960 NDR1/HIN1-like 12 NDR1/HIN1-like 12 0.72 0.3 -0.31
43 AT5G40690 CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site
(InterPro:IPR018247); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G41730.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.72 0.3 -0.33
44 AT1G22400 UDP-Glycosyltransferase superfamily protein ARABIDOPSIS THALIANA UDP-GLUCOSYL
TRANSFERASE 85A1, UGT85A1		 -0.72 0.31 -0.31
45 AT3G61070 peroxin 11E peroxin 11E -0.72 0.31 -0.33
46 AT4G21790 tobamovirus multiplication 1 ATTOM1, tobamovirus multiplication
1		 -0.72 0.33 -0.32
47 AT1G51940 protein kinase family protein / peptidoglycan-binding LysM
domain-containing protein		 0.72 0.31 -0.31
48 AT5G34930 arogenate dehydrogenase -0.72 0.3 -0.3
49 AT2G29680 cell division control 6 ATCDC6, cell division control 6 0.72 0.32 -0.31
50 AT3G02550 LOB domain-containing protein 41 LOB domain-containing protein 41 -0.72 0.31 -0.3
51 AT4G30700 Pentatricopeptide repeat (PPR) superfamily protein 0.72 0.29 -0.32
52 AT4G10270 Wound-responsive family protein -0.72 0.32 -0.33
53 AT1G62422 unknown protein; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G12020.1); Has 87 Blast hits to 86 proteins in 14
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 87; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.71 0.33 -0.31
54 AT1G01420 UDP-glucosyl transferase 72B3 UDP-glucosyl transferase 72B3 0.71 0.34 -0.3
55 AT5G42890 sterol carrier protein 2 STEROL CARRIER PROTEIN 2, sterol
carrier protein 2		 -0.71 0.32 -0.3
56 AT1G49300 RAB GTPase homolog G3E ARABIDOPSIS RAB GTPASE HOMOLOG 7,
ARABIDOPSIS RAB GTPASE HOMOLOG
G3E, RAB GTPase homolog G3E		 -0.71 0.3 -0.32
57 AT2G35010 thioredoxin O1 thioredoxin O1, thioredoxin O1 -0.71 0.3 -0.33
58 AT3G10040 sequence-specific DNA binding transcription factors -0.71 0.31 -0.32
59 AT5G09860 nuclear matrix protein-related AtHPR1, AtTHO1, HPR1, THO1 0.71 0.32 -0.31
60 AT3G48810 Pentatricopeptide repeat (PPR) superfamily protein 0.71 0.32 -0.33
61 AT1G07650 Leucine-rich repeat transmembrane protein kinase 0.71 0.32 -0.33
62 AT1G33055 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: anaerobic respiration; LOCATED IN:
endomembrane system; EXPRESSED IN: 13 plant structures;
EXPRESSED DURING: 6 growth stages; Has 20 Blast hits to 20
proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.71 0.31 -0.31
63 AT4G30550 Class I glutamine amidotransferase-like superfamily protein gamma-glutamyl peptidase 3 -0.71 0.32 -0.33
64 AT3G28730 high mobility group high mobility group, high mobility
group, NUCLEOSOME/CHROMATIN
ASSEMBLY FACTOR D, SSRP1		 0.71 0.31 -0.3
65 AT1G75270 dehydroascorbate reductase 2 dehydroascorbate reductase 2 -0.71 0.32 -0.3
66 AT3G11880 Protein of unknown function DUF2359, transmembrane -0.7 0.32 -0.31
67 AT1G75820 Leucine-rich receptor-like protein kinase family protein ATCLV1, CLAVATA 1, FASCIATA 3,
FLOWER DEVELOPMENT 5		 0.7 0.32 -0.3
68 AT3G10640 SNF7 family protein VPS60.1 -0.7 0.32 -0.31
69 AT5G49960 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1012 (InterPro:IPR010420); BEST
Arabidopsis thaliana protein match is: Protein of unknown
function (DUF1012) (TAIR:AT5G02940.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.7 0.31 -0.3
70 AT3G63120 cyclin p1;1 cyclin p1;1 0.7 0.3 -0.32
71 AT2G22690 zinc ion binding -0.7 0.3 -0.31
72 AT5G04940 SU(VAR)3-9 homolog 1 SU(VAR)3-9 homolog 1 0.7 0.33 -0.32
73 AT5G47760 2-phosphoglycolate phosphatase 2 2-phosphoglycolate phosphatase 2,
ATPK5, PGLP2, 2-phosphoglycolate
phosphatase 2		 -0.7 0.32 -0.3
74 AT3G56950 small and basic intrinsic protein 2;1 SMALL AND BASIC INTRINSIC PROTEIN
2, small and basic intrinsic
protein 2;1		 -0.7 0.31 -0.32
75 AT3G04520 threonine aldolase 2 threonine aldolase 2 -0.7 0.31 -0.32
76 AT3G19650 cyclin-related 0.7 0.33 -0.32
77 AT1G64200 vacuolar H+-ATPase subunit E isoform 3 vacuolar H+-ATPase subunit E
isoform 3		 -0.7 0.33 -0.32
78 AT3G04470 Ankyrin repeat family protein 0.7 0.33 -0.32
79 AT5G55340 MBOAT (membrane bound O-acyl transferase) family protein 0.7 0.32 -0.34
80 AT2G19170 subtilisin-like serine protease 3 subtilisin-like serine protease 3 0.7 0.33 -0.31
81 AT4G26310 elongation factor P (EF-P) family protein -0.7 0.3 -0.32
82 AT1G29340 plant U-box 17 ARABIDOPSIS THALIANA PLANT U-BOX
17, plant U-box 17		 -0.7 0.33 -0.3
83 AT2G39780 ribonuclease 2 ribonuclease 2 -0.7 0.32 -0.33
84 AT5G23810 amino acid permease 7 amino acid permease 7 -0.69 0.31 -0.31
85 AT3G23330 Tetratricopeptide repeat (TPR)-like superfamily protein 0.69 0.34 -0.33
86 AT5G67490 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1674 (InterPro:IPR012875); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.69 0.31 -0.3
87 AT2G25280 CONTAINS InterPro DOMAIN/s: UPF0103/Mediator of
ErbB2-driven cell motility (Memo), related
(InterPro:IPR002737); Has 1074 Blast hits to 1072 proteins
in 474 species: Archae - 213; Bacteria - 366; Metazoa -
159; Fungi - 135; Plants - 54; Viruses - 0; Other
Eukaryotes - 147 (source: NCBI BLink).		 -0.69 0.34 -0.31
88 AT3G12280 retinoblastoma-related 1 RETINOBLASTOMA-RELATED PROTEIN 1,
RB, RETINOBLASTOMA 1,
RETINOBLASTOMA-RELATED,
retinoblastoma-related 1		 0.69 0.33 -0.29
89 AT3G15290 3-hydroxyacyl-CoA dehydrogenase family protein -0.69 0.31 -0.3
90 AT1G53560 Ribosomal protein L18ae family -0.69 0.31 -0.3
91 AT2G33630 NAD(P)-binding Rossmann-fold superfamily protein -0.69 0.31 -0.31
92 AT5G12210 RAB geranylgeranyl transferase beta subunit 1 RAB geranylgeranyl transferase
beta subunit 1, RAB geranylgeranyl
transferase beta subunit 1		 -0.69 0.32 -0.31
93 AT5G42850 Thioredoxin superfamily protein -0.69 0.32 -0.33
94 AT5G01940 eukaryotic translation initiation factor 2B family protein
/ eIF-2B family protein		 -0.69 0.3 -0.32
95 AT2G01540 Calcium-dependent lipid-binding (CaLB domain) family
protein		 -0.69 0.3 -0.32
96 AT1G14360 UDP-galactose transporter 3 ATUTR3, UDP-galactose transporter
3		 -0.68 0.3 -0.32
97 AT5G57510 unknown protein; Has 27 Blast hits to 27 proteins in 9
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.68 0.33 -0.29
98 AT1G71710 DNAse I-like superfamily protein 0.68 0.3 -0.31
99 AT4G30500 Protein of unknown function (DUF788) -0.68 0.35 -0.3
100 AT1G17080 Ribosomal protein L18ae family -0.68 0.31 -0.33
101 AT3G04350 Plant protein of unknown function (DUF946) -0.68 0.3 -0.32
102 AT3G14730 Pentatricopeptide repeat (PPR) superfamily protein 0.68 0.34 -0.29
103 AT4G32420 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 0.68 0.32 -0.29
104 AT2G39810 ubiquitin-protein ligases HIGH EXPRESSION OF OSMOTICALLY
RESPONSIVE GENES 1		 0.68 0.31 -0.33
105 AT4G35750 SEC14 cytosolic factor family protein / phosphoglyceride
transfer family protein		 -0.68 0.29 -0.29
106 AT5G45400 Replication factor-A protein 1-related ATRPA70C, RPA70C 0.68 0.32 -0.33
107 AT5G62575 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G47833.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 succinate dehydrogenase 7,
succinate dehydrogenase 7B		 -0.68 0.3 -0.31
108 AT2G35620 Leucine-rich repeat protein kinase family protein FEI 2 0.68 0.31 -0.32
109 AT5G11970 Protein of unknown function (DUF3511) -0.68 0.32 -0.31
110 AT4G21470 riboflavin kinase/FMN hydrolase riboflavin kinase/FMN hydrolase,
riboflavin kinase/FMN hydrolase		 -0.68 0.34 -0.3
111 AT5G48360 Actin-binding FH2 (formin homology 2) family protein 0.67 0.29 -0.29
112 AT5G10800 RNA recognition motif (RRM)-containing protein 0.67 0.34 -0.31
113 AT5G48600 structural maintenance of chromosome 3 ARABIDOPSIS THALIANA CHROMOSOME
ASSOCIATED PROTEIN-C, structural
maintenance of chromosome 3,
ARABIDOPSIS THALIANA STRUCTURAL
MAINTENANCE OF CHROMOSOME 4,
structural maintenance of
chromosome 3		 0.66 0.32 -0.3
114 AT5G37010 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; EXPRESSED
IN: 22 plant structures; EXPRESSED DURING: 13 growth
stages; BEST Arabidopsis thaliana protein match is: unknown
protein (TAIR:AT1G65710.1); Has 6746 Blast hits to 5259
proteins in 486 species: Archae - 7; Bacteria - 485;
Metazoa - 3508; Fungi - 577; Plants - 378; Viruses - 50;
Other Eukaryotes - 1741 (source: NCBI BLink).		 0.66 0.28 -0.31
115 AT4G14605 Mitochondrial transcription termination factor family
protein		 0.66 0.31 -0.31