AT1G03560 : -
Query Information
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AGICode AT1G03560
Description Pentatricopeptide repeat (PPR-like) superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G03560 Pentatricopeptide repeat (PPR-like) superfamily protein 1 0.28 -0.34
2 AT3G10180 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.71 0.31 -0.32
3 AT1G10320 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.7 0.31 -0.3
4 AT1G80930 MIF4G domain-containing protein / MA3 domain-containing
protein		 0.69 0.3 -0.31
5 AT5G44530 Subtilase family protein 0.68 0.3 -0.32
6 AT2G20290 myosin-like protein XIG MYOSIN XI G, myosin-like protein
XIG		 0.66 0.31 -0.32
7 AT5G09880 Splicing factor, CC1-like 0.65 0.3 -0.3
8 AT1G03900 non-intrinsic ABC protein 4 ATP-binding cassette I18,
non-intrinsic ABC protein 4,
non-intrinsic ABC protein 4		 -0.64 0.32 -0.33
9 AT3G19960 myosin 1 myosin 1 0.64 0.32 -0.33
10 AT4G31200 SWAP (Suppressor-of-White-APricot)/surp RNA-binding
domain-containing protein		 0.63 0.32 -0.3
11 AT3G53200 myb domain protein 27 myb domain protein 27, myb domain
protein 27		 -0.62 0.29 -0.31
12 AT1G43850 SEUSS transcriptional co-regulator seuss 0.61 0.32 -0.3
13 AT2G47250 RNA helicase family protein 0.61 0.31 -0.31
14 AT4G38760 Protein of unknown function (DUF3414) 0.61 0.31 -0.29
15 AT4G23410 tetraspanin5 tetraspanin5 -0.61 0.3 -0.3
16 AT1G26960 homeobox protein 23 homeobox protein 23, homeobox
protein 23		 -0.6 0.33 -0.32
17 AT2G02400 NAD(P)-binding Rossmann-fold superfamily protein -0.6 0.34 -0.33
18 AT3G09700 Chaperone DnaJ-domain superfamily protein -0.6 0.32 -0.31
19 AT5G46030 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF701, zinc-binding putative
(InterPro:IPR007808); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.59 0.31 -0.33
20 AT1G20050 C-8,7 sterol isomerase HYDRA1 -0.59 0.33 -0.3
21 AT3G66652 fip1 motif-containing protein 0.59 0.32 -0.31
22 AT4G11950 Protein of unknown function (DUF1191) 0.59 0.31 -0.34
23 AT1G73130 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G17780.2); Has 1447 Blast hits
to 774 proteins in 215 species: Archae - 0; Bacteria - 679;
Metazoa - 377; Fungi - 171; Plants - 42; Viruses - 6; Other
Eukaryotes - 172 (source: NCBI BLink).		 0.59 0.33 -0.32
24 AT3G54480 SKP1/ASK-interacting protein 5 SKP1/ASK-interacting protein 5,
SKP5		 -0.58 0.31 -0.3
25 AT1G52720 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G15630.1); Has 61 Blast hits
to 61 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.58 0.29 -0.31
26 AT5G41870 Pectin lyase-like superfamily protein 0.57 0.32 -0.33
27 AT1G44414 unknown protein; Has 29 Blast hits to 29 proteins in 12
species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0;
Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.57 0.3 -0.3
28 AT2G32560 F-box family protein -0.57 0.31 -0.31
29 AT1G22885 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 15 Blast hits to 15
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.57 0.33 -0.34
30 AT3G10070 TBP-associated factor 12 TBP-associated factor 12,
TATA-ASSOCIATED FACTOR II 58		 0.57 0.3 -0.33
31 AT1G10180 BEST Arabidopsis thaliana protein match is: exocyst complex
component 84B (TAIR:AT5G49830.1); Has 132 Blast hits to 132
proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa -
7; Fungi - 0; Plants - 117; Viruses - 0; Other Eukaryotes -
8 (source: NCBI BLink).		 0.57 0.32 -0.31
32 AT1G33980 Smg-4/UPF3 family protein ATUPF3, UPF3 0.56 0.3 -0.32
33 AT5G47340 alpha/beta-Hydrolases superfamily protein 0.56 0.31 -0.3
34 AT2G14595 transposable element gene 0.56 0.32 -0.31
35 AT3G24540 Protein kinase superfamily protein proline-rich extensin-like
receptor kinase 3, proline-rich
extensin-like receptor kinase 3		 0.55 0.29 -0.31
36 AT5G16270 sister chromatid cohesion 1 protein 4 ARABIDOPSIS HOMOLOG OF RAD21 3,
sister chromatid cohesion 1
protein 4		 0.55 0.31 -0.3
37 AT4G35905 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF343 (InterPro:IPR005651); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.55 0.32 -0.33
38 AT3G18790 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Isy1-like
splicing (InterPro:IPR009360); Has 1147 Blast hits to 965
proteins in 236 species: Archae - 12; Bacteria - 13;
Metazoa - 351; Fungi - 230; Plants - 49; Viruses - 9; Other
Eukaryotes - 483 (source: NCBI BLink).		 0.55 0.3 -0.32
39 AT1G21730 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.54 0.3 -0.34
40 AT3G21290 dentin sialophosphoprotein-related 0.54 0.31 -0.31
41 AT5G51710 K+ efflux antiporter 5 ARABIDOPSIS THALIANA K+ EFFLUX
ANTIPORTER 5, K+ efflux antiporter
5		 0.53 0.32 -0.3
42 AT2G17270 phosphate transporter 3;3 phosphate transporter 3;3 0.53 0.32 -0.31
43 AT5G10520 ROP binding protein kinases 1 ROP binding protein kinases 1 -0.52 0.31 -0.31
44 AT5G18525 protein serine/threonine kinases;protein tyrosine
kinases;ATP binding;protein kinases		 0.52 0.3 -0.32
45 AT1G77670 Pyridoxal phosphate (PLP)-dependent transferases
superfamily protein		 -0.52 0.3 -0.31
46 AT3G63020 Protein of unknown function (DUF3049) 0.52 0.3 -0.32
47 AT3G12040 DNA-3-methyladenine glycosylase (MAG) -0.51 0.31 -0.31
48 AT2G23770 protein kinase family protein / peptidoglycan-binding LysM
domain-containing protein		 -0.51 0.33 -0.3
49 AT1G67940 non-intrinsic ABC protein 3 ATP-binding cassette I17,
non-intrinsic ABC protein 3,
AtSTAR1, ARABIDOPSIS THALIANA
NON-INTRINSIC ABC PROTEIN 3,
non-intrinsic ABC protein 3		 -0.51 0.32 -0.31
50 AT1G30800 Fasciclin-like arabinogalactan family protein -0.5 0.29 -0.34
51 AT1G24938 transposable element gene -0.5 0.3 -0.33
52 AT4G02180 DC1 domain-containing protein -0.49 0.31 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
53 C0264 Valine D,L-Valine L-Valine jasmonoyl-amino acid conjugates biosynthesis I,
pantothenate biosynthesis,
IAA degradation V,
valine degradation I,
valine biosynthesis,
tRNA charging,
indole-3-acetyl-amino acid biosynthesis 		0.54 0.32 -0.32 C0264