AT1G03457 : -
Query Information
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AGICode AT1G03457
Description RNA-binding (RRM/RBD/RNP motifs) family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G03457 RNA-binding (RRM/RBD/RNP motifs) family protein 1 0.32 -0.31
2 AT5G64240 metacaspase 3 metacaspase 3, metacaspase 1a,
metacaspase 3, metacaspase 1a		 0.68 0.31 -0.32
3 AT5G41330 BTB/POZ domain with WD40/YVTN repeat-like protein -0.67 0.32 -0.31
4 AT5G26210 alfin-like 4 alfin-like 4 0.67 0.33 -0.31
5 AT2G25620 DNA-binding protein phosphatase 1 DNA-binding protein phosphatase 1,
DNA-binding protein phosphatase 1		 -0.65 0.31 -0.32
6 AT1G36990 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 24
plant structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G08510.1); Has 5029 Blast hits to 1779 proteins in
339 species: Archae - 2; Bacteria - 1372; Metazoa - 990;
Fungi - 933; Plants - 111; Viruses - 28; Other Eukaryotes -
1593 (source: NCBI BLink).		 -0.65 0.31 -0.29
7 AT1G15400 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G80180.1); Has 82 Blast
hits to 82 proteins in 16 species: Archae - 0; Bacteria -
4; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other
Eukaryotes - 3 (source: NCBI BLink).		 0.65 0.31 -0.31
8 AT4G17190 farnesyl diphosphate synthase 2 farnesyl diphosphate synthase 2 0.65 0.32 -0.34
9 AT5G05250 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G56360.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.64 0.34 -0.31
10 AT4G18593 dual specificity protein phosphatase-related 0.63 0.34 -0.31
11 AT4G17486 PPPDE putative thiol peptidase family protein 0.63 0.33 -0.31
12 AT5G60790 ABC transporter family protein ATP-binding cassette F1,
ARABIDOPSIS THALIANA GENERAL
CONTROL NON-REPRESSIBLE 1, GENERAL
CONTROL NON-REPRESSIBLE 1		 -0.63 0.31 -0.33
13 AT2G39200 Seven transmembrane MLO family protein MILDEW RESISTANCE LOCUS O 12,
MILDEW RESISTANCE LOCUS O 12		 -0.63 0.35 -0.32
14 AT3G27270 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing
protein		 -0.62 0.34 -0.3
15 AT5G65710 HAESA-like 2 HAESA-like 2 -0.62 0.31 -0.3
16 AT2G29120 glutamate receptor 2.7 glutamate receptor 2.7, GLUTAMATE
RECEPTOR 2.7, glutamate receptor
2.7		 -0.62 0.32 -0.31
17 AT1G03470 Kinase interacting (KIP1-like) family protein 0.62 0.29 -0.33
18 AT2G18620 Terpenoid synthases superfamily protein 0.62 0.31 -0.29
19 AT5G47880 eukaryotic release factor 1-1 eukaryotic release factor 1-1 -0.62 0.3 -0.32
20 AT3G18990 AP2/B3-like transcriptional factor family protein REPRODUCTIVE MERISTEM 39, REDUCED
VERNALIZATION RESPONSE 1		 0.62 0.33 -0.32
21 AT3G12960 unknown protein; Has 44 Blast hits to 44 proteins in 14
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.62 0.34 -0.32
22 AT5G24390 Ypt/Rab-GAP domain of gyp1p superfamily protein 0.61 0.33 -0.32
23 AT2G34450 HMG-box (high mobility group) DNA-binding family protein -0.61 0.3 -0.32
24 AT4G34215 Domain of unknown function (DUF303) 0.61 0.3 -0.33
25 AT1G71860 protein tyrosine phosphatase 1 ATPTP1, protein tyrosine
phosphatase 1		 0.61 0.31 -0.32
26 AT1G60890 Phosphatidylinositol-4-phosphate 5-kinase family protein -0.61 0.29 -0.31
27 AT1G14940 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 0.6 0.3 -0.3
28 AT5G52580 RabGAP/TBC domain-containing protein -0.6 0.34 -0.33
29 AT4G11360 RING-H2 finger A1B RING-H2 finger A1B 0.6 0.32 -0.31
30 AT2G13600 Pentatricopeptide repeat (PPR) superfamily protein -0.6 0.31 -0.33
31 AT5G44060 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G04000.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.6 0.29 -0.3
32 AT3G52360 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to karrikin; LOCATED IN: endomembrane
system; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 14 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G35850.1); Has 34 Blast
hits to 34 proteins in 10 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.59 0.32 -0.33
33 AT3G59910 Ankyrin repeat family protein -0.59 0.3 -0.31
34 AT5G20360 Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein
/ tetratricopeptide repeat (TPR)-containing protein		 Phox3 -0.59 0.32 -0.31
35 AT3G04730 indoleacetic acid-induced protein 16 indoleacetic acid-induced protein
16		 0.59 0.31 -0.32
36 AT2G41900 CCCH-type zinc finger protein with ARM repeat domain OXIDATIVE STRESS 2 -0.59 0.31 -0.31
37 AT4G04670 Met-10+ like family protein / kelch repeat-containing
protein		 -0.59 0.33 -0.32
38 AT2G39710 Eukaryotic aspartyl protease family protein -0.59 0.33 -0.29
39 AT1G76810 eukaryotic translation initiation factor 2 (eIF-2) family
protein		 -0.58 0.31 -0.29
40 AT1G35330 RING/U-box superfamily protein 0.58 0.34 -0.29
41 AT1G03960 Calcium-binding EF hand family protein -0.58 0.34 -0.3
42 AT3G55320 P-glycoprotein 20 ATP-binding cassette B20,
P-glycoprotein 20		 -0.58 0.32 -0.33
43 AT4G17570 GATA transcription factor 26 GATA transcription factor 26 -0.58 0.32 -0.31
44 AT5G22280 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G44280.1); Has 82 Blast hits to 82 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.58 0.33 -0.3
45 AT2G38280 AMP deaminase, putative / myoadenylate deaminase, putative ADENOSINE 5'-MONOPHOSPHATE
DEAMINASE, EMBRYONIC FACTOR1		 -0.58 0.31 -0.31
46 AT1G53910 related to AP2 12 related to AP2 12 -0.58 0.32 -0.31
47 AT1G11610 cytochrome P450, family 71, subfamily A, polypeptide 18 cytochrome P450, family 71,
subfamily A, polypeptide 18		 -0.58 0.3 -0.31
48 AT1G07170 PHF5-like protein 0.57 0.31 -0.31
49 AT1G30290 Tetratricopeptide repeat (TPR)-like superfamily protein -0.57 0.32 -0.31
50 AT5G64920 COP1-interacting protein 8 COP1-interacting protein 8 0.57 0.32 -0.32
51 AT4G38670 Pathogenesis-related thaumatin superfamily protein 0.57 0.32 -0.32
52 AT5G21170 5'-AMP-activated protein kinase beta-2 subunit protein AKINBETA1 0.57 0.32 -0.31
53 AT3G53440 Homeodomain-like superfamily protein -0.57 0.33 -0.32
54 AT5G05080 ubiquitin-conjugating enzyme 22 ATUBC22, ubiquitin-conjugating
enzyme 22		 0.56 0.3 -0.31
55 AT3G15170 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 Arabidopsis NAC domain containing
protein 54, ATNAC1, CUP-SHAPED
COTYLEDON1		 -0.56 0.32 -0.31
56 AT1G62940 acyl-CoA synthetase 5 acyl-CoA synthetase 5 -0.56 0.32 -0.32
57 AT5G24340 3'-5' exonuclease domain-containing protein -0.56 0.34 -0.31
58 AT2G19660 Cysteine/Histidine-rich C1 domain family protein 0.56 0.31 -0.31
59 AT5G14940 Major facilitator superfamily protein -0.56 0.29 -0.31
60 AT3G60240 eukaryotic translation initiation factor 4G CUCUMOVIRUS MULTIPLICATION 2,
eukaryotic translation initiation
factor 4G		 -0.56 0.3 -0.31
61 AT2G34560 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.56 0.32 -0.34
62 AT5G54830 DOMON domain-containing protein / dopamine
beta-monooxygenase N-terminal domain-containing protein		 -0.56 0.32 -0.31
63 AT2G35750 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; Has 1 Blast hits to 1
proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.55 0.31 -0.33
64 AT2G18190 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.55 0.31 -0.31
65 AT4G35040 Basic-leucine zipper (bZIP) transcription factor family
protein		 bZIP19 -0.55 0.33 -0.32
66 AT1G42650 transposable element gene -0.55 0.31 -0.34
67 AT1G01160 GRF1-interacting factor 2 GRF1-interacting factor 2 0.55 0.32 -0.3
68 AT4G21620 glycine-rich protein -0.55 0.32 -0.3
69 AT5G52020 Integrase-type DNA-binding superfamily protein 0.55 0.3 -0.3
70 AT3G06130 Heavy metal transport/detoxification superfamily protein 0.55 0.31 -0.34
71 AT5G15400 U-box domain-containing protein -0.55 0.3 -0.3
72 AT1G32810 RING/FYVE/PHD zinc finger superfamily protein -0.54 0.3 -0.34
73 AT3G24650 AP2/B3-like transcriptional factor family protein ABA INSENSITIVE 3, ABSCISIC ACID
INSENSITIVE 3, SUGAR INSENSITIVE
10		 -0.54 0.32 -0.3
74 AT1G63730 Disease resistance protein (TIR-NBS-LRR class) family -0.54 0.3 -0.34
75 AT5G58870 FTSH protease 9 FTSH protease 9 -0.54 0.31 -0.33
76 AT5G24970 Protein kinase superfamily protein -0.54 0.31 -0.31
77 AT3G03410 EF hand calcium-binding protein family 0.54 0.3 -0.34
78 AT3G62490 transposable element gene -0.54 0.31 -0.29
79 AT4G11050 glycosyl hydrolase 9C3 glycosyl hydrolase 9C3, glycosyl
hydrolase 9C3		 0.54 0.32 -0.3
80 AT2G39940 RNI-like superfamily protein CORONATINE INSENSITIVE 1 -0.53 0.29 -0.3
81 AT5G11730 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.53 0.33 -0.34
82 AT1G26520 Cobalamin biosynthesis CobW-like protein -0.53 0.3 -0.33
83 AT1G22660 Polynucleotide adenylyltransferase family protein -0.53 0.33 -0.3
84 AT4G24200 Transcription elongation factor (TFIIS) family protein -0.53 0.32 -0.32
85 AT4G27660 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G54150.1); Has 115 Blast hits
to 109 proteins in 25 species: Archae - 0; Bacteria - 0;
Metazoa - 10; Fungi - 0; Plants - 100; Viruses - 0; Other
Eukaryotes - 5 (source: NCBI BLink).		 0.52 0.33 -0.33
86 AT3G63020 Protein of unknown function (DUF3049) -0.52 0.32 -0.31
87 AT4G04770 ATP binding cassette protein 1 ATP binding cassette protein 1,
ATP-binding cassette I8, ATP
binding cassette protein 1,
ARABIDOPSIS THALIANA NUCLEOSOME
ASSEMBLY PROTEIN 1, LONG AFTER FR		 -0.52 0.31 -0.33
88 AT4G27910 SET domain protein 16 ATX4, SET domain protein 16 -0.52 0.29 -0.29
89 AT5G47490 RGPR-related -0.52 0.3 -0.31
90 AT1G27140 glutathione S-transferase tau 14 glutathione S-transferase tau 14,
GLUTATHIONE S-TRANSFERASE 13,
glutathione S-transferase tau 14		 0.52 0.31 -0.32
91 AT2G39170 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function NEP (InterPro:IPR019320); Has 57 Blast
hits to 57 proteins in 26 species: Archae - 0; Bacteria -
0; Metazoa - 19; Fungi - 0; Plants - 34; Viruses - 0; Other
Eukaryotes - 4 (source: NCBI BLink).		 -0.52 0.32 -0.31
92 AT4G16000 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G15990.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.51 0.31 -0.34
93 AT1G57700 Protein kinase superfamily protein -0.51 0.31 -0.32
94 AT3G31910 Domain of unknown function (DUF1985) -0.51 0.3 -0.31
95 AT3G07150 unknown protein; Has 19 Blast hits to 19 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.51 0.29 -0.35
96 AT4G12540 unknown protein; Has 29 Blast hits to 26 proteins in 11
species: Archae - 2; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.51 0.3 -0.31
97 AT1G20135 GDSL-like Lipase/Acylhydrolase family protein -0.51 0.29 -0.29
98 AT3G09430 unknown protein; Has 17 Blast hits to 17 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.51 0.33 -0.29
99 AT3G19400 Cysteine proteinases superfamily protein 0.5 0.32 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
100 C0105 Glutathione disulfide - Glutathione disulfide sulfate reduction II (assimilatory),
selenate reduction,
glutathione redox reactions I,
ascorbate glutathione cycle,
glutathione redox reactions II 		-0.72 0.46 -0.45 C0105
101 C0145 Maltotetraose - Maltotetraose starch degradation II -0.67 0.45 -0.46 C0145
102 C0117 Hydroxyproline (2S,4R)-Hydroxyproline 4-Hydroxy-L-proline protein precursor -0.59 0.46 -0.46 C0117