AGICode | AT1G03420 |
Description | transposable element gene |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT1G03420 | transposable element gene | sadhu non-coding retrotransposon 4-2 |
1 | 0.33 | -0.33 | ||
2 | AT2G39900 | GATA type zinc finger transcription factor family protein | WLIM2a | 0.76 | 0.31 | -0.32 | ||
3 | AT5G49460 | ATP citrate lyase subunit B 2 | ATP citrate lyase subunit B 2 | 0.75 | 0.31 | -0.32 | ||
4 | AT4G28440 | Nucleic acid-binding, OB-fold-like protein | 0.74 | 0.29 | -0.34 | |||
5 | AT5G09250 | ssDNA-binding transcriptional regulator | KIWI | 0.71 | 0.31 | -0.32 | ||
6 | AT2G13820 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
AtXYP2, xylogen protein 2 | 0.7 | 0.34 | -0.32 | ||
7 | AT4G22320 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G55210.1); Has 8953 Blast hits to 5363 proteins in 542 species: Archae - 33; Bacteria - 806; Metazoa - 2454; Fungi - 831; Plants - 279; Viruses - 151; Other Eukaryotes - 4399 (source: NCBI BLink). |
0.7 | 0.31 | -0.32 | |||
8 | AT5G66750 | chromatin remodeling 1 | ATDDM1, CHA1, CHROMATIN REMODELING 1, chromatin remodeling 1, DECREASED DNA METHYLATION 1, SOMNIFEROUS 1, SOM4 |
0.69 | 0.32 | -0.3 | ||
9 | AT1G08780 | ABI3-interacting protein 3 | ABI3-interacting protein 3, PREFOLDIN 4 |
0.69 | 0.31 | -0.32 | ||
10 | AT3G02850 | STELAR K+ outward rectifier | STELAR K+ outward rectifier | 0.68 | 0.3 | -0.32 | ||
11 | AT1G28160 | Integrase-type DNA-binding superfamily protein | 0.68 | 0.31 | -0.31 | |||
12 | AT4G37210 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.67 | 0.3 | -0.31 | |||
13 | AT1G03030 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.67 | 0.29 | -0.33 | |||
14 | AT5G42420 | Nucleotide-sugar transporter family protein | 0.66 | 0.31 | -0.3 | |||
15 | AT2G36410 | Family of unknown function (DUF662) | 0.66 | 0.32 | -0.3 | |||
16 | AT4G28190 | Developmental regulator, ULTRAPETALA | ULTRAPETALA, ULTRAPETALA1 | 0.66 | 0.31 | -0.32 | ||
17 | AT3G23200 | Uncharacterised protein family (UPF0497) | -0.66 | 0.31 | -0.32 | |||
18 | AT1G05790 | lipase class 3 family protein | -0.66 | 0.32 | -0.32 | |||
19 | AT5G41600 | VIRB2-interacting protein 3 | VIRB2-interacting protein 3, Reticulan like protein B4 |
0.65 | 0.31 | -0.3 | ||
20 | AT2G32810 | beta galactosidase 9 | beta galactosidase 9, beta-galactosidase 9 |
-0.65 | 0.32 | -0.32 | ||
21 | AT1G48230 | nodulin MtN21 /EamA-like transporter family protein | 0.65 | 0.31 | -0.35 | |||
22 | AT1G76240 | Arabidopsis protein of unknown function (DUF241) | 0.64 | 0.29 | -0.32 | |||
23 | AT5G03770 | KDO transferase A | AtKdtA, KDO transferase A | -0.64 | 0.31 | -0.31 | ||
24 | AT3G28270 | Protein of unknown function (DUF677) | -0.63 | 0.3 | -0.29 | |||
25 | AT3G28890 | receptor like protein 43 | receptor like protein 43, receptor like protein 43 |
-0.63 | 0.31 | -0.31 | ||
26 | AT1G78770 | anaphase promoting complex 6 | anaphase promoting complex 6 | 0.63 | 0.32 | -0.34 | ||
27 | AT2G20300 | Protein kinase superfamily protein | Abnormal Leaf Shape 2 | 0.63 | 0.32 | -0.32 | ||
28 | AT4G31360 | selenium binding | 0.63 | 0.32 | -0.31 | |||
29 | AT3G53650 | Histone superfamily protein | 0.62 | 0.32 | -0.3 | |||
30 | AT1G80800 | pseudogene, 40S ribosomal protein S12 (RPS12B), similar to ribosomal protein S12 GB:AAD39838 GI:5106775 from (Hordeum vulgare); blastp match of 65% identity and 4.7e-12 P-value to GP|23617253|dbj|BAC20920.1||AP005764 putative 40S ribosomal protein S12 {Oryza sativa (japonica cultivar-group)} |
-0.62 | 0.32 | -0.32 | |||
31 | AT2G19660 | Cysteine/Histidine-rich C1 domain family protein | 0.62 | 0.32 | -0.31 | |||
32 | AT4G35070 | SBP (S-ribonuclease binding protein) family protein | -0.61 | 0.33 | -0.31 | |||
33 | AT2G32520 | alpha/beta-Hydrolases superfamily protein | -0.6 | 0.31 | -0.3 | |||
34 | AT1G28320 | protease-related | DEG15 | -0.6 | 0.31 | -0.32 | ||
35 | AT3G17980 | Calcium-dependent lipid-binding (CaLB domain) family protein |
Arabidopsis thaliana C2 domain, C2 domain |
-0.59 | 0.31 | -0.35 | ||
36 | AT4G12410 | SAUR-like auxin-responsive protein family | -0.59 | 0.3 | -0.3 | |||
37 | AT3G52610 | unknown protein; Has 68 Blast hits to 67 proteins in 21 species: Archae - 0; Bacteria - 11; Metazoa - 0; Fungi - 0; Plants - 55; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
-0.59 | 0.33 | -0.32 | |||
38 | AT5G57710 | Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein |
-0.59 | 0.32 | -0.31 | |||
39 | AT1G01770 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1446 (InterPro:IPR010839); Has 1597 Blast hits to 1509 proteins in 306 species: Archae - 4; Bacteria - 843; Metazoa - 22; Fungi - 131; Plants - 31; Viruses - 0; Other Eukaryotes - 566 (source: NCBI BLink). |
-0.59 | 0.32 | -0.32 | |||
40 | AT1G15300 | transposable element gene | -0.59 | 0.33 | -0.33 | |||
41 | AT4G25660 | PPPDE putative thiol peptidase family protein | -0.57 | 0.32 | -0.32 | |||
42 | AT4G19440 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.57 | 0.31 | -0.32 | |||
43 | AT3G03790 | ankyrin repeat family protein / regulator of chromosome condensation (RCC1) family protein |
-0.56 | 0.32 | -0.32 | |||
44 | AT3G54380 | SAC3/GANP/Nin1/mts3/eIF-3 p25 family | AtSAC3C, yeast Sac3 homolog C | -0.56 | 0.35 | -0.29 | ||
45 | AT2G32780 | ubiquitin-specific protease 1 | ATUBP1, ubiquitin-specific protease 1 |
-0.56 | 0.34 | -0.32 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
46 | C0131 | Kaempferol-3-O-β-glucopyranoside-7-O-α-rhamnopyranoside | Kaempferol-3-O-β-D-glucopyranoside-7-O-α-L-rhamnopyranoside | Kaempferol-3-glucoside-7-rhamnoside | kaempferol glucoside biosynthesis (Arabidopsis) | -0.78 | 0.46 | -0.45 | ||
47 | C0221 | Quercetin-3-(2''-O-α-rhamnosyl)-O-β-glucosyl-7-O-α-rhamnoside | Quercetin-3-(2''-O-α-L-rhamnosyl)-O-β-D-glucosyl-7-O-α-L-rhamnoside | - | quercetin glucoside biosynthesis (Arabidopsis) | -0.62 | 0.45 | -0.45 |