AT1G23220 : -
Query Information
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AGICode AT1G23220
Description Dynein light chain type 1 family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G23220 Dynein light chain type 1 family protein 1 0.3 -0.32
2 AT3G46430 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, mitochondrial respiratory chain complex III;
EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15
growth stages; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT5G59613.2); Has 51 Blast hits to 51
proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.81 0.32 -0.33
3 AT4G37445 BEST Arabidopsis thaliana protein match is: Calcium-binding
EF hand family protein (TAIR:AT1G64850.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.8 0.29 -0.31
4 AT2G46540 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, membrane; EXPRESSED IN: 25 plant structures;
EXPRESSED DURING: 16 growth stages; Has 42 Blast hits to 42
proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.8 0.31 -0.3
5 AT4G34720 ATPase, F0/V0 complex, subunit C protein ATVHA-C1, AVA-P1, VACUOLAR
H+-PUMPING ATPASE C1		 0.79 0.3 -0.33
6 AT2G38610 RNA-binding KH domain-containing protein 0.79 0.33 -0.3
7 AT3G16100 RAB GTPase homolog G3C ATRAB7D, RAB GTPase homolog G3C,
RAB GTPase homolog G3C		 0.78 0.32 -0.32
8 AT1G67250 Proteasome maturation factor UMP1 0.77 0.3 -0.31
9 AT1G48850 chorismate synthase, putative /
5-enolpyruvylshikimate-3-phosphate phospholyase, putative		 embryo defective 1144 0.77 0.33 -0.33
10 AT1G28250 unknown protein; Has 22 Blast hits to 22 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.76 0.3 -0.31
11 AT4G14800 20S proteasome beta subunit D2 20S proteasome beta subunit D2 0.76 0.33 -0.32
12 AT3G13520 arabinogalactan protein 12 arabinogalactan protein 12,
ATAGP12		 0.76 0.3 -0.3
13 AT5G54750 Transport protein particle (TRAPP) component 0.76 0.32 -0.3
14 AT1G28120 CONTAINS InterPro DOMAIN/s: Ovarian tumour, otubain
(InterPro:IPR003323), Ubiquitin thioesterase Otubain
(InterPro:IPR016615), Peptidase C65, otubain
(InterPro:IPR019400); Has 413 Blast hits to 411 proteins in
139 species: Archae - 0; Bacteria - 0; Metazoa - 184; Fungi
- 83; Plants - 88; Viruses - 0; Other Eukaryotes - 58
(source: NCBI BLink).		 0.75 0.31 -0.31
15 AT5G49440 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.75 0.32 -0.32
16 AT3G22845 emp24/gp25L/p24 family/GOLD family protein 0.75 0.32 -0.31
17 AT3G54170 FKBP12 interacting protein 37 FKBP12 interacting protein 37,
FKBP12 interacting protein 37		 0.74 0.32 -0.3
18 AT1G09920 TRAF-type zinc finger-related 0.74 0.32 -0.3
19 AT1G21920 Histone H3 K4-specific methyltransferase SET7/9 family
protein		 -0.73 0.31 -0.33
20 AT4G14110 COP9 signalosome, subunit CSN8 CONSTITUTIVE PHOTOMORPHOGENIC 9,
COP9 SIGNALOSOME SUBUNIT 8, EMBRYO
DEFECTIVE 143, FUSCA 7		 0.73 0.31 -0.32
21 AT4G34460 GTP binding protein beta 1 GTP binding protein beta 1,
ATAGB1, ERECTA-LIKE 4		 0.73 0.3 -0.3
22 AT3G05500 Rubber elongation factor protein (REF) 0.72 0.32 -0.32
23 AT5G45010 DSS1 homolog on chromosome V DSS1 homolog on chromosome V, DSS1
homolog on chromosome V		 0.72 0.29 -0.34
24 AT5G53310 myosin heavy chain-related 0.72 0.32 -0.3
25 AT4G39150 DNAJ heat shock N-terminal domain-containing protein 0.72 0.3 -0.33
26 AT1G15370 SNARE-like superfamily protein 0.72 0.32 -0.32
27 AT3G51040 RTE1-homolog RTE1-homolog 0.72 0.3 -0.3
28 AT2G41420 proline-rich family protein WINDHOSE 2 0.71 0.35 -0.32
29 AT4G14420 HR-like lesion-inducing protein-related 0.71 0.32 -0.31
30 AT4G35000 ascorbate peroxidase 3 ascorbate peroxidase 3 0.71 0.31 -0.32
31 AT2G19460 Protein of unknown function (DUF3511) 0.71 0.33 -0.32
32 AT5G01340 Mitochondrial substrate carrier family protein AtmSFC1, mitochondrial
succinate-fumarate carrier 1		 0.7 0.3 -0.32
33 AT5G03370 acylphosphatase family 0.7 0.31 -0.33
34 AT3G10740 alpha-L-arabinofuranosidase 1 ALPHA-L-ARABINOFURANOSIDASE,
ALPHA-L-ARABINOFURANOSIDASE 1,
alpha-L-arabinofuranosidase 1,
ARABIDOPSIS THALIANA
ALPHA-L-ARABINOFURANOSIDASE 1		 -0.7 0.31 -0.3
35 AT5G67590 NADH-ubiquinone oxidoreductase-related FROSTBITE1 0.7 0.31 -0.32
36 AT3G15060 RAB GTPase homolog A1G RAB GTPase homolog A1G, RAB GTPase
homolog A1G		 0.7 0.32 -0.3
37 AT4G10810 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G24026.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.7 0.32 -0.31
38 AT1G77440 20S proteasome beta subunit C2 20S proteasome beta subunit C2 0.7 0.3 -0.32
39 AT1G31940 unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN:
22 plant structures; EXPRESSED DURING: 13 growth stages;
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT2G35585.1); Has 67 Blast hits to 67 proteins in 17
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.7 0.32 -0.32
40 AT1G23260 MMS ZWEI homologue 1 MMS ZWEI homologue 1, UBIQUITIN E2
VARIANT 1A		 0.7 0.32 -0.32
41 AT5G26940 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 defective in pollen organelle DNA
degradation1		 0.7 0.33 -0.32
42 AT4G23870 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G11020.1); Has 12 Blast hits
to 12 proteins in 4 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 12; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.7 0.32 -0.33
43 AT2G22660 Protein of unknown function (duplicated DUF1399) -0.7 0.33 -0.3
44 AT4G30996 Protein of unknown function (DUF1068) NA(+)- AND K(+)-SENSITIVE 1 0.69 0.34 -0.31
45 AT2G40900 nodulin MtN21 /EamA-like transporter family protein -0.69 0.31 -0.31
46 AT2G37500 arginine biosynthesis protein ArgJ family 0.69 0.31 -0.3
47 AT1G15330 Cystathionine beta-synthase (CBS) protein -0.69 0.34 -0.32
48 AT3G62730 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 13 plant structures;
EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis,
LP.02 two leaves visible, petal differentiation and
expansion stage; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G47980.1); Has 172 Blast hits
to 172 proteins in 41 species: Archae - 0; Bacteria - 73;
Metazoa - 0; Fungi - 0; Plants - 99; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.69 0.32 -0.31
49 AT5G49940 NIFU-like protein 2 CHLOROPLAST-LOCALIZED NIFU-LIKE
PROTEIN 2, NIFU-like protein 2		 0.68 0.31 -0.32
50 AT4G29040 regulatory particle AAA-ATPase 2A regulatory particle AAA-ATPase 2A 0.68 0.3 -0.32
51 AT5G25760 peroxin4 peroxin4, ubiquitin-conjugating
enzyme 21		 0.68 0.33 -0.31
52 AT1G64700 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 17 plant
structures; EXPRESSED DURING: 11 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G61920.1); Has 48 Blast hits to 47 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.68 0.32 -0.31
53 AT4G04210 plant UBX domain containing protein 4 plant UBX domain containing
protein 4		 0.68 0.31 -0.34
54 AT1G70490 Ras-related small GTP-binding family protein ARFA1D, ATARFA1D 0.68 0.32 -0.32
55 AT2G36680 Modifier of rudimentary (Mod(r)) protein 0.68 0.3 -0.3
56 AT2G18550 homeobox protein 21 homeobox protein 21, homeobox-2,
homeobox protein 21		 -0.68 0.32 -0.31
57 AT1G43640 tubby like protein 5 tubby like protein 5, tubby like
protein 5		 0.67 0.29 -0.31
58 AT1G02700 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT4G02140.1); Has 49 Blast hits to 49
proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa -
10; Fungi - 6; Plants - 29; Viruses - 0; Other Eukaryotes -
4 (source: NCBI BLink).		 -0.67 0.29 -0.32
59 AT2G38550 Transmembrane proteins 14C 0.67 0.3 -0.3
60 AT5G16320 FRIGIDA like 1 FRIGIDA like 1 0.67 0.29 -0.32
61 AT2G35700 ERF family protein 38 ERF FAMILY PROTEIN 38, ERF family
protein 38		 0.67 0.3 -0.33
62 AT4G37670 N-acetyl-l-glutamate synthase 2 N-acetyl-l-glutamate synthase 2 0.67 0.3 -0.34
63 AT3G26980 membrane-anchored ubiquitin-fold protein 4 precursor membrane-anchored ubiquitin-fold
protein 4 precursor		 0.67 0.32 -0.32
64 AT4G30010 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, plastid; EXPRESSED IN: 26 plant structures;
EXPRESSED DURING: 15 growth stages; Has 39 Blast hits to 39
proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.67 0.31 -0.32
65 AT2G26830 Protein kinase superfamily protein embryo defective 1187 0.67 0.33 -0.32
66 AT3G14430 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to oxidative stress; LOCATED IN:
mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; Has 16 Blast hits to 16 proteins
in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.66 0.31 -0.34
67 AT5G11740 arabinogalactan protein 15 arabinogalactan protein 15,
ATAGP15		 0.66 0.32 -0.32
68 AT5G50460 secE/sec61-gamma protein transport protein 0.66 0.33 -0.32
69 AT4G11260 phosphatase-related ATSGT1B, ENHANCED DOWNY MILDEW 1,
ENHANCER OF TIR1-1 AUXIN
RESISTANCE 3, RPR1, SGT1B		 0.66 0.31 -0.32
70 AT4G26410 Uncharacterised conserved protein UCP022280 0.66 0.3 -0.32
71 AT2G25780 Protein of unknown function (DUF1677) 0.66 0.33 -0.33
72 AT5G09920 RNA polymerase II, Rpb4, core protein ATRPB15.9, NRPB4, RPB15.9,
RPB15.9.9		 0.66 0.33 -0.32
73 AT3G12630 A20/AN1-like zinc finger family protein stress associated protein 5 0.66 0.31 -0.32
74 AT5G40960 Protein of unknown function (DUF 3339) -0.65 0.3 -0.33
75 AT3G58770 unknown protein; Has 38 Blast hits to 36 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2;
Plants - 32; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 -0.65 0.31 -0.31
76 AT2G07490 transposable element gene -0.65 0.3 -0.34
77 AT2G20670 Protein of unknown function (DUF506) -0.63 0.33 -0.32
78 AT2G34610 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G30190.1); Has 342 Blast hits
to 279 proteins in 74 species: Archae - 0; Bacteria - 7;
Metazoa - 76; Fungi - 18; Plants - 51; Viruses - 0; Other
Eukaryotes - 190 (source: NCBI BLink).		 -0.62 0.29 -0.32
79 AT3G20100 cytochrome P450, family 705, subfamily A, polypeptide 19 cytochrome P450, family 705,
subfamily A, polypeptide 19		 -0.62 0.31 -0.34
80 AT5G11360 Interleukin-1 receptor-associated kinase 4 protein -0.6 0.31 -0.32
81 AT1G69430 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G26650.1); Has 216 Blast hits
to 215 proteins in 17 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 216; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.6 0.35 -0.33
82 AT5G63800 Glycosyl hydrolase family 35 protein beta-galactosidase 6,
MUCILAGE-MODIFIED 2		 -0.59 0.31 -0.31
83 AT4G15040 Subtilisin-like serine endopeptidase family protein -0.59 0.3 -0.31
84 AT4G18395 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.59 0.31 -0.3
85 AT5G25990 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast; BEST
Arabidopsis thaliana protein match is: Core-2/I-branching
beta-1,6-N-acetylglucosaminyltransferase family protein
(TAIR:AT5G25970.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.59 0.34 -0.3
86 AT1G29790 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.59 0.31 -0.33
87 AT3G43100 transposable element gene -0.58 0.36 -0.32
88 AT1G27990 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G52420.1); Has 86 Blast hits
to 86 proteins in 15 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).		 -0.58 0.31 -0.33
89 AT1G59790 Cullin family protein -0.58 0.32 -0.3
90 AT2G07728 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: cultured cell;
Has 1 Blast hits to 1 proteins in 1 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses -
0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.58 0.32 -0.31
91 AT5G62120 response regulator 23 response regulator 23, response
regulator 23		 -0.57 0.31 -0.32
92 AT4G22400 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G18320.2); Has 44 Blast hits
to 44 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.56 0.32 -0.32
93 AT1G55940 cytochrome P450, family 708, subfamily A, polypeptide 1 cytochrome P450, family 708,
subfamily A, polypeptide 1		 -0.56 0.29 -0.31
94 AT5G30440 transposable element gene -0.56 0.31 -0.33
95 AT5G57670 Protein kinase superfamily protein -0.56 0.32 -0.3
96 AT1G76290 AMP-dependent synthetase and ligase family protein -0.56 0.3 -0.34
97 AT1G72160 Sec14p-like phosphatidylinositol transfer family protein -0.55 0.3 -0.33
98 AT4G31940 cytochrome P450, family 82, subfamily C, polypeptide 4 cytochrome P450, family 82,
subfamily C, polypeptide 4		 -0.55 0.34 -0.31
99 AT2G25000 WRKY DNA-binding protein 60 ATWRKY60, WRKY DNA-binding protein
60		 -0.55 0.3 -0.29
100 AT1G11990 O-fucosyltransferase family protein -0.55 0.31 -0.33
101 AT3G13772 transmembrane nine 7 AtTMN7, transmembrane nine 7 -0.55 0.31 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
102 C0066 Choline - Choline choline biosynthesis III,
phosphatidylcholine biosynthesis I,
choline biosynthesis I,
glycine betaine biosynthesis III (plants),
choline biosynthesis II,
sinapate ester biosynthesis,
phospholipases 		-0.56 0.32 -0.31 C0066
103 C0140 Lysine L-Lysine L-Lysine lysine degradation II,
tRNA charging,
lysine biosynthesis VI,
lysine degradation I 		-0.56 0.32 -0.32 C0140