AGICode | AT2G17300 |
Description | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G35320.1); Has 42 Blast hits to 42 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT2G17300 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G35320.1); Has 42 Blast hits to 42 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
1 | 0.31 | -0.29 | |||
2 | AT4G10360 | TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein |
0.77 | 0.31 | -0.33 | |||
3 | AT5G46240 | potassium channel in Arabidopsis thaliana 1 | potassium channel in Arabidopsis thaliana 1 |
0.75 | 0.33 | -0.32 | ||
4 | AT1G26290 | unknown protein; Has 126 Blast hits to 112 proteins in 36 species: Archae - 0; Bacteria - 6; Metazoa - 14; Fungi - 3; Plants - 14; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink). |
0.74 | 0.32 | -0.31 | |||
5 | AT1G70210 | CYCLIN D1;1 | ATCYCD1;1, CYCLIN D1;1 | 0.74 | 0.32 | -0.32 | ||
6 | AT1G76930 | extensin 4 | EXTENSIN 1, extensin 4, extensin 1, extensin 4, OBP3-RESPONSIVE GENE 5 |
-0.74 | 0.32 | -0.31 | ||
7 | AT3G10760 | Homeodomain-like superfamily protein | 0.72 | 0.32 | -0.32 | |||
8 | AT1G50420 | scarecrow-like 3 | SCARECROW-LIKE 3, scarecrow-like 3 | -0.71 | 0.32 | -0.31 | ||
9 | AT1G07640 | Dof-type zinc finger DNA-binding family protein | OBP2 | 0.7 | 0.31 | -0.3 | ||
10 | AT3G02290 | RING/U-box superfamily protein | 0.7 | 0.33 | -0.33 | |||
11 | AT2G20230 | Tetraspanin family protein | 0.7 | 0.33 | -0.32 | |||
12 | AT3G51670 | SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein |
0.7 | 0.31 | -0.3 | |||
13 | AT5G24660 | response to low sulfur 2 | RESPONSE TO LOW SULFUR 2 | 0.7 | 0.32 | -0.3 | ||
14 | AT4G23990 | cellulose synthase like G3 | ARABIDOPSIS THALIANA CELLULOSE SYNTHASE-LIKE G3, cellulose synthase like G3 |
0.7 | 0.31 | -0.32 | ||
15 | AT5G39860 | basic helix-loop-helix (bHLH) DNA-binding family protein | BASIC HELIX-LOOP-HELIX PROTEIN 136, BANQUO 1, PACLOBUTRAZOL RESISTANCE1 |
0.69 | 0.3 | -0.31 | ||
16 | AT2G14460 | unknown protein; Has 3 Blast hits to 3 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.69 | 0.32 | -0.31 | |||
17 | AT5G03670 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G36420.1); Has 700 Blast hits to 624 proteins in 104 species: Archae - 0; Bacteria - 18; Metazoa - 333; Fungi - 60; Plants - 73; Viruses - 24; Other Eukaryotes - 192 (source: NCBI BLink). |
-0.68 | 0.32 | -0.34 | |||
18 | AT4G00430 | plasma membrane intrinsic protein 1;4 | plasma membrane intrinsic protein 1;4, PLASMA MEMBRANE INTRINSIC PROTEIN 1E, TRANSMEMBRANE PROTEIN C |
0.68 | 0.3 | -0.31 | ||
19 | AT1G69010 | BES1-interacting Myc-like protein 2 | BES1-interacting Myc-like protein 2 |
0.68 | 0.34 | -0.32 | ||
20 | AT2G15530 | RING/U-box superfamily protein | 0.68 | 0.32 | -0.28 | |||
21 | AT2G42750 | DNAJ heat shock N-terminal domain-containing protein | 0.67 | 0.31 | -0.31 | |||
22 | AT3G14280 | unknown protein; Has 51 Blast hits to 51 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.67 | 0.31 | -0.31 | |||
23 | AT2G43550 | Scorpion toxin-like knottin superfamily protein | 0.67 | 0.31 | -0.29 | |||
24 | AT1G33790 | jacalin lectin family protein | -0.67 | 0.31 | -0.31 | |||
25 | AT1G19700 | BEL1-like homeodomain 10 | BEL1-like homeodomain 10, BEL1-LIKE HOMEODOMAIN 10 |
0.67 | 0.29 | -0.34 | ||
26 | AT1G10640 | Pectin lyase-like superfamily protein | 0.66 | 0.33 | -0.29 | |||
27 | AT3G61970 | AP2/B3-like transcriptional factor family protein | NGATHA2 | 0.66 | 0.3 | -0.33 | ||
28 | AT2G40060 | Clathrin light chain protein | clathrin light chain 2 | 0.66 | 0.31 | -0.32 | ||
29 | AT1G04900 | Protein of unknown function (DUF185) | -0.65 | 0.3 | -0.32 | |||
30 | AT3G54860 | Sec1/munc18-like (SM) proteins superfamily | ATVPS33, VACUOLAR PROTEIN SORTING 33 |
0.65 | 0.33 | -0.31 | ||
31 | AT5G03420 | 5'-AMP-activated protein kinase-related | 0.65 | 0.32 | -0.32 | |||
32 | AT5G60600 | 4-hydroxy-3-methylbut-2-enyl diphosphate synthase | CHLOROPLAST BIOGENESIS 4, CONSTITUTIVE SUBTILISIN 3, GCPE, 4-hydroxy-3-methylbut-2-enyl diphosphate synthase, ISPG |
0.65 | 0.31 | -0.31 | ||
33 | AT2G20340 | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein |
0.65 | 0.31 | -0.32 | |||
34 | AT3G26700 | Protein kinase superfamily protein | 0.65 | 0.33 | -0.32 | |||
35 | AT1G51690 | protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform |
protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform, protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform |
0.65 | 0.31 | -0.32 | ||
36 | AT5G40270 | HD domain-containing metal-dependent phosphohydrolase family protein |
0.65 | 0.3 | -0.32 | |||
37 | AT5G01840 | ovate family protein 1 | ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 1, ovate family protein 1 |
-0.65 | 0.31 | -0.31 | ||
38 | AT3G60550 | cyclin p3;2 | cyclin p3;2 | -0.65 | 0.31 | -0.29 | ||
39 | AT1G55330 | arabinogalactan protein 21 | arabinogalactan protein 21, ARABINOGALACTAN PROTEIN 21 |
0.64 | 0.34 | -0.33 | ||
40 | AT4G33100 | CONTAINS InterPro DOMAIN/s: Mitochondrial distribution/morphology family 35/apoptosis (InterPro:IPR007918); Has 214 Blast hits to 214 proteins in 102 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 69; Plants - 29; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). |
-0.64 | 0.3 | -0.31 | |||
41 | AT5G40540 | Protein kinase superfamily protein | -0.64 | 0.32 | -0.32 | |||
42 | AT1G79470 | Aldolase-type TIM barrel family protein | -0.64 | 0.34 | -0.31 | |||
43 | AT2G28690 | Protein of unknown function (DUF1635) | -0.64 | 0.31 | -0.3 | |||
44 | AT5G42960 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast, plastid, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G45170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.64 | 0.3 | -0.3 | |||
45 | AT1G12030 | Protein of unknown function (DUF506) | 0.64 | 0.31 | -0.31 | |||
46 | AT1G10310 | NAD(P)-binding Rossmann-fold superfamily protein | 0.64 | 0.32 | -0.3 | |||
47 | AT3G20070 | titan9 | TITAN9 | 0.64 | 0.34 | -0.32 | ||
48 | AT5G41340 | ubiquitin conjugating enzyme 4 | UBIQUITIN CONJUGATING ENZYME 4, ubiquitin conjugating enzyme 4 |
0.64 | 0.31 | -0.32 | ||
49 | AT2G46630 | unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 110095 Blast hits to 59224 proteins in 2216 species: Archae - 177; Bacteria - 15429; Metazoa - 38345; Fungi - 18843; Plants - 13341; Viruses - 3084; Other Eukaryotes - 20876 (source: NCBI BLink). |
0.63 | 0.33 | -0.3 | |||
50 | AT5G27920 | F-box family protein | -0.63 | 0.31 | -0.32 | |||
51 | AT5G19140 | Aluminium induced protein with YGL and LRDR motifs | AILP1, ATAILP1 | 0.63 | 0.32 | -0.34 | ||
52 | AT5G45970 | RAC-like 2 | Arabidopsis RAC-like 2, ARABIDOPSIS THALIANA RAC 2, RHO-RELATED PROTEIN FROM PLANTS 7, RAC-like 2, ROP7 |
0.63 | 0.3 | -0.31 | ||
53 | AT5G08290 | mRNA splicing factor, thioredoxin-like U5 snRNP | YELLOW-LEAF-SPECIFIC GENE 8 | 0.63 | 0.3 | -0.32 | ||
54 | AT1G48620 | high mobility group A5 | high mobility group A5 | 0.63 | 0.32 | -0.32 | ||
55 | AT3G12480 | nuclear factor Y, subunit C11 | nuclear factor Y, subunit C11 | 0.62 | 0.35 | -0.32 | ||
56 | AT2G02850 | plantacyanin | plantacyanin | -0.62 | 0.33 | -0.35 | ||
57 | AT4G30290 | xyloglucan endotransglucosylase/hydrolase 19 | XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 19, xyloglucan endotransglucosylase/hydrolase 19 |
-0.62 | 0.31 | -0.34 | ||
58 | AT3G56240 | copper chaperone | copper chaperone | 0.62 | 0.29 | -0.31 | ||
59 | AT1G56710 | Pectin lyase-like superfamily protein | 0.62 | 0.31 | -0.32 | |||
60 | AT4G26630 | DEK domain-containing chromatin associated protein | 0.62 | 0.32 | -0.32 | |||
61 | AT5G14720 | Protein kinase superfamily protein | 0.62 | 0.33 | -0.31 | |||
62 | AT1G14570 | UBX domain-containing protein | 0.61 | 0.31 | -0.32 | |||
63 | AT5G09800 | ARM repeat superfamily protein | -0.61 | 0.31 | -0.32 | |||
64 | AT1G67890 | PAS domain-containing protein tyrosine kinase family protein |
0.61 | 0.33 | -0.32 | |||
65 | AT3G59010 | pectin methylesterase 61 | pectin methylesterase 61 | 0.61 | 0.32 | -0.32 | ||
66 | AT5G61570 | Protein kinase superfamily protein | 0.61 | 0.32 | -0.29 | |||
67 | AT1G69340 | appr-1-p processing enzyme family protein | 0.61 | 0.3 | -0.33 | |||
68 | AT1G22050 | membrane-anchored ubiquitin-fold protein 6 precursor | membrane-anchored ubiquitin-fold protein 6 precursor |
0.61 | 0.35 | -0.3 | ||
69 | AT4G16830 | Hyaluronan / mRNA binding family | 0.61 | 0.34 | -0.32 | |||
70 | AT3G56980 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
BHLH039, OBP3-RESPONSIVE GENE 3 | 0.61 | 0.34 | -0.29 | ||
71 | AT3G45430 | Concanavalin A-like lectin protein kinase family protein | 0.61 | 0.33 | -0.32 | |||
72 | AT5G42830 | HXXXD-type acyl-transferase family protein | -0.61 | 0.31 | -0.32 | |||
73 | AT1G16830 | Pentatricopeptide repeat (PPR) superfamily protein | -0.61 | 0.32 | -0.31 | |||
74 | AT2G47440 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.61 | 0.32 | -0.29 | |||
75 | AT3G18290 | zinc finger protein-related | BRUTUS, embryo defective 2454 | 0.61 | 0.33 | -0.32 | ||
76 | AT5G67280 | receptor-like kinase | receptor-like kinase | 0.61 | 0.32 | -0.31 | ||
77 | AT1G52980 | GTP-binding family protein | nuclear/nucleolar GTPase 2, nuclear/nucleolar GTPase 2 |
-0.61 | 0.31 | -0.3 | ||
78 | AT4G16140 | proline-rich family protein | 0.61 | 0.32 | -0.31 | |||
79 | AT1G19600 | pfkB-like carbohydrate kinase family protein | -0.6 | 0.31 | -0.3 | |||
80 | AT5G10280 | myb domain protein 92 | ATMYB64, myb domain protein 92, myb domain protein 92 |
-0.6 | 0.31 | -0.31 | ||
81 | AT5G65090 | DNAse I-like superfamily protein | BRISTLED 1, DEFORMED ROOT HAIRS 4, MRH3 |
-0.6 | 0.31 | -0.33 | ||
82 | AT1G21310 | extensin 3 | extensin 3, extensin 3, ROOT-SHOOT-HYPOCOTYL DEFECTIVE |
-0.59 | 0.32 | -0.32 | ||
83 | AT5G40100 | Disease resistance protein (TIR-NBS-LRR class) family | -0.59 | 0.32 | -0.29 | |||
84 | AT2G46850 | Protein kinase superfamily protein | -0.59 | 0.3 | -0.31 | |||
85 | AT1G14780 | MAC/Perforin domain-containing protein | -0.59 | 0.32 | -0.31 | |||
86 | AT5G09500 | Ribosomal protein S19 family protein | -0.59 | 0.29 | -0.31 | |||
87 | AT1G55610 | BRI1 like | BRI1 like | -0.59 | 0.33 | -0.3 | ||
88 | AT2G14960 | Auxin-responsive GH3 family protein | GH3.1 | -0.58 | 0.33 | -0.31 | ||
89 | AT3G50190 | Plant protein of unknown function (DUF247) | -0.58 | 0.31 | -0.32 | |||
90 | AT5G38700 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.04 four leaves visible, LP.10 ten leaves visible, petal differentiation and expansion stage, LP.08 eight leaves visible, LP.12 twelve leaves visible; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02170.1); Has 64 Blast hits to 64 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.58 | 0.31 | -0.32 | |||
91 | AT1G68120 | basic pentacysteine 3 | ATBPC3, basic pentacysteine 3 | -0.58 | 0.32 | -0.31 | ||
92 | AT4G13660 | pinoresinol reductase 2 | ATPRR2, pinoresinol reductase 2 | -0.58 | 0.28 | -0.31 | ||
93 | AT4G26110 | nucleosome assembly protein1;1 | ARABIDOPSIS THALIANA NUCLEOSOME ASSEMLY PROTEIN 1;1, nucleosome assembly protein1;1 |
-0.58 | 0.31 | -0.29 | ||
94 | AT4G36450 | mitogen-activated protein kinase 14 | mitogen-activated protein kinase 14, MPK14, mitogen-activated protein kinase 14 |
-0.57 | 0.31 | -0.32 | ||
95 | AT4G33990 | Tetratricopeptide repeat (TPR)-like superfamily protein | embryo defective 2758 | -0.56 | 0.32 | -0.32 | ||
96 | AT5G49520 | WRKY DNA-binding protein 48 | ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 48, WRKY DNA-binding protein 48 |
-0.56 | 0.3 | -0.3 | ||
97 | AT2G43690 | Concanavalin A-like lectin protein kinase family protein | -0.56 | 0.32 | -0.32 | |||
98 | AT1G56010 | NAC domain containing protein 1 | Arabidopsis NAC domain containing protein 21, Arabidopsis NAC domain containing protein 22, NAC domain containing protein 1 |
-0.55 | 0.31 | -0.31 | ||
99 | AT1G19610 | Arabidopsis defensin-like protein | LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 78, PDF1.4 |
-0.55 | 0.3 | -0.3 | ||
100 | AT5G40780 | lysine histidine transporter 1 | lysine histidine transporter 1 | -0.55 | 0.3 | -0.35 | ||
101 | AT3G19470 | F-box and associated interaction domains-containing protein | -0.54 | 0.3 | -0.31 | |||
102 | AT1G48690 | Auxin-responsive GH3 family protein | -0.54 | 0.29 | -0.33 | |||
103 | AT2G17860 | Pathogenesis-related thaumatin superfamily protein | -0.54 | 0.29 | -0.34 | |||
104 | AT1G72950 | Disease resistance protein (TIR-NBS class) | -0.53 | 0.32 | -0.33 | |||
105 | AT5G65630 | global transcription factor group E7 | global transcription factor group E7 |
-0.53 | 0.29 | -0.33 | ||
106 | AT2G04060 | glycosyl hydrolase family 35 protein | -0.53 | 0.32 | -0.33 | |||
107 | AT3G21090 | ABC-2 type transporter family protein | ATP-binding cassette G15 | -0.53 | 0.33 | -0.31 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
108 | C0035 | 4-Methoxyindol-3-ylmethylglucosinolate | - | 4-Methoxy-3-indolylmethyl glucosinolate | glucosinolate biosynthesis from tryptophan, indole glucosinolate breakdown (active in intact plant cell) |
-0.7 | 0.44 | -0.45 |