AT1G76950 : PRAF1
Query Information
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AGICode AT1G76950
Description Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G76950 Regulator of chromosome condensation (RCC1) family with
FYVE zinc finger domain		 PRAF1 1 0.32 -0.31
2 AT5G48400 Glutamate receptor family protein ATGLR1.2, GLUTAMATE RECEPTOR 1.2 0.63 0.31 -0.3
3 AT3G17890 unknown protein; Has 31 Blast hits to 31 proteins in 12
species: Archae - 0; Bacteria - 4; Metazoa - 5; Fungi - 10;
Plants - 12; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.63 0.31 -0.33
4 AT3G27510 Cysteine/Histidine-rich C1 domain family protein 0.61 0.32 -0.3
5 AT3G61860 RNA-binding (RRM/RBD/RNP motifs) family protein arginine/serine-rich splicing
factor 31, arginine/serine-rich
splicing factor 31,
arginine/serine-rich splicing
factor 31, arginine/serine-rich
splicing factor 31		 -0.6 0.32 -0.3
6 AT1G80860 phospholipid N-methyltransferase ARABIDOPSIS PHOSPHOLIPID
N-METHYLTRANSFERASE, phospholipid
N-methyltransferase		 -0.59 0.31 -0.31
7 AT5G48060 C2 calcium/lipid-binding plant phosphoribosyltransferase
family protein		 0.58 0.29 -0.3
8 AT4G10510 Subtilase family protein 0.58 0.35 -0.32
9 AT2G17270 phosphate transporter 3;3 phosphate transporter 3;3 0.58 0.31 -0.32
10 AT2G25570 binding -0.58 0.32 -0.29
11 AT5G01660 CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch,
beta-propeller (InterPro:IPR011043), Kelch repeat type 1
(InterPro:IPR006652), Development/cell death domain
(InterPro:IPR013989), Kelch related (InterPro:IPR013089),
Kelch-type beta propeller (InterPro:IPR015915); BEST
Arabidopsis thaliana protein match is: DCD (Development and
Cell Death) domain protein (TAIR:AT3G11000.1); Has 16133
Blast hits to 7053 proteins in 482 species: Archae - 40;
Bacteria - 1227; Metazoa - 10756; Fungi - 311; Plants -
1896; Viruses - 673; Other Eukaryotes - 1230 (source: NCBI
BLink).		 -0.56 0.32 -0.31
12 AT3G12940 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.56 0.31 -0.32
13 AT5G04390 C2H2-type zinc finger family protein -0.56 0.31 -0.32
14 AT5G12350 Regulator of chromosome condensation (RCC1) family with
FYVE zinc finger domain		 0.55 0.34 -0.31
15 AT2G34340 Protein of unknown function, DUF584 -0.55 0.33 -0.31
16 AT5G60630 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 6 growth stages; BEST Arabidopsis thaliana protein
match is: hydroxyproline-rich glycoprotein family protein
(TAIR:AT3G45230.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.54 0.33 -0.32
17 AT3G03440 ARM repeat superfamily protein 0.54 0.31 -0.3
18 AT1G41860 transposable element gene -0.53 0.33 -0.31
19 AT5G34880 transposable element gene 0.53 0.32 -0.31
20 AT1G01930 zinc finger protein-related -0.53 0.32 -0.3
21 AT3G19090 RNA-binding protein 0.52 0.32 -0.3
22 AT5G55130 co-factor for nitrate, reductase and xanthine dehydrogenase
5		 co-factor for nitrate, reductase
and xanthine dehydrogenase 5,
SIRTINOL RESISTANT 1		 -0.52 0.3 -0.32
23 AT2G21430 Papain family cysteine protease 0.52 0.3 -0.32
24 AT1G60540 pseudogene of the dynamin family Dynamin related protein 4B 0.51 0.31 -0.33
25 AT5G20730 Transcriptional factor B3 family protein / auxin-responsive
factor AUX/IAA-related		 AUXIN RESPONSE FACTOR 7, BIPOSTO,
indole-3-acetic acid inducible 21,
indole-3-acetic acid inducible 23,
indole-3-acetic acid inducible 25,
MASSUGU 1, NON-PHOTOTROPHIC
HYPOCOTYL, TRANSPORT INHIBITOR
RESPONSE 5		 0.51 0.32 -0.32
26 AT1G13980 sec7 domain-containing protein EMBRYO DEFECTIVE 30, GNOM,
VASCULAR NETWORK 7		 0.5 0.32 -0.31
27 AT2G10340 unknown protein; Has 5 Blast hits to 5 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.5 0.3 -0.31
28 AT4G02140 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 13 plant structures; EXPRESSED
DURING: 4 anthesis, F mature embryo stage, petal
differentiation and expansion stage, D bilateral stage;
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G02700.1); Has 19 Blast hits to 19 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.49 0.32 -0.31
29 AT3G02310 K-box region and MADS-box transcription factor family
protein 		AGAMOUS-like 4, SEPALLATA 2 -0.49 0.3 -0.33
30 AT1G08860 Calcium-dependent phospholipid-binding Copine family
protein		 BONZAI 3 0.49 0.31 -0.32
31 AT1G79840 HD-ZIP IV family of homeobox-leucine zipper protein with
lipid-binding START domain		 GLABRA 2 0.49 0.32 -0.32
32 AT4G00160 F-box/RNI-like/FBD-like domains-containing protein 0.48 0.32 -0.34
33 AT1G73860 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.48 0.31 -0.33
34 AT1G72410 COP1-interacting protein-related 0.48 0.3 -0.32
35 AT1G02670 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.48 0.32 -0.32
36 AT4G26120 Ankyrin repeat family protein / BTB/POZ domain-containing
protein		 0.48 0.3 -0.32
37 AT2G10500 transposable element gene -0.47 0.31 -0.32
38 AT2G27270 BEST Arabidopsis thaliana protein match is: Late
embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family (TAIR:AT4G01410.1); Has 250 Blast hits
to 250 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 250; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.47 0.31 -0.32
39 AT4G12330 cytochrome P450, family 706, subfamily A, polypeptide 7 cytochrome P450, family 706,
subfamily A, polypeptide 7		 -0.47 0.31 -0.32
40 AT1G29750 receptor-like kinase in flowers 1 receptor-like kinase in flowers 1 0.47 0.29 -0.33
41 AT5G43790 Pentatricopeptide repeat (PPR) superfamily protein 0.47 0.33 -0.34
42 AT2G17170 Protein kinase superfamily protein 0.47 0.29 -0.3
43 AT2G06190 transposable element gene 0.46 0.31 -0.32
44 AT5G43110 pumilio 14 pumilio 14, pumilio 14 0.46 0.3 -0.29
45 AT1G66610 TRAF-like superfamily protein 0.46 0.31 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
46 C0174 MST_2370.2 - - - 0.82 0.48 -0.46
47 C0233 Sinapinic acid - cis-Sinapinate; Sinapate ferulate and sinapate biosynthesis,
sinapate ester biosynthesis,
free phenylpropanoid acid biosynthesis 		0.73 0.47 -0.42 C0233
48 C0212 PR_MST_2336.8 - - - 0.67 0.43 -0.42