AT1G61660 : -
Query Information
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AGICode AT1G61660
Description basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G61660 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 1 0.3 -0.31
2 AT4G00710 BR-signaling kinase 3 BR-signaling kinase 3 -0.8 0.33 -0.32
3 AT1G68570 Major facilitator superfamily protein 0.79 0.3 -0.29
4 AT4G30190 H(+)-ATPase 2 H(+)-ATPase 2, H(+)-ATPase 2,
PLASMA MEMBRANE PROTON ATPASE 2		 -0.75 0.31 -0.3
5 AT3G07360 plant U-box 9 ARABIDOPSIS THALIANA PLANT U-BOX
9, plant U-box 9		 0.74 0.29 -0.32
6 AT2G32800 protein kinase family protein AP4.3A 0.74 0.33 -0.31
7 AT1G64970 gamma-tocopherol methyltransferase gamma-tocopherol
methyltransferase, TMT1, VITAMIN E
DEFICIENT 4		 0.74 0.31 -0.3
8 AT1G51140 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.74 0.3 -0.32
9 AT2G43050 Plant invertase/pectin methylesterase inhibitor superfamily ATPMEPCRD -0.73 0.3 -0.32
10 AT2G34300 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.73 0.3 -0.29
11 AT1G09780 Phosphoglycerate mutase,
2,3-bisphosphoglycerate-independent		 2,3-biphosphoglycerate-independent
phosphoglycerate mutase 1		 -0.73 0.33 -0.32
12 AT2G35610 xyloglucanase 113 xyloglucanase 113 -0.73 0.31 -0.32
13 AT1G11680 CYTOCHROME P450 51G1 CYTOCHROME P450 51, CYTOCHROME
P450 51A2, CYTOCHROME P450 51G1,
embryo defective 1738		 -0.72 0.33 -0.31
14 AT3G02350 galacturonosyltransferase 9 galacturonosyltransferase 9 -0.72 0.32 -0.33
15 AT3G06040 Ribosomal protein L12/ ATP-dependent Clp protease adaptor
protein ClpS family protein		 -0.72 0.33 -0.3
16 AT5G45480 Protein of unknown function (DUF594) -0.72 0.33 -0.3
17 AT1G57560 myb domain protein 50 myb domain protein 50, myb domain
protein 50		 -0.72 0.32 -0.32
18 AT2G23350 poly(A) binding protein 4 poly(A) binding protein 4, POLY(A)
BINDING PROTEIN 4		 -0.72 0.32 -0.31
19 AT4G11290 Peroxidase superfamily protein -0.72 0.31 -0.32
20 AT3G11410 protein phosphatase 2CA AHG3, ARABIDOPSIS THALIANA PROTEIN
PHOSPHATASE 2CA, protein
phosphatase 2CA		 0.72 0.31 -0.32
21 AT5G45630 Protein of unknown function, DUF584 0.71 0.3 -0.29
22 AT3G20730 Tetratricopeptide repeat (TPR)-like superfamily protein -0.71 0.34 -0.31
23 AT1G69210 Uncharacterised protein family UPF0090 -0.71 0.32 -0.33
24 AT3G15780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G52550.1); Has 20 Blast hits
to 20 proteins in 5 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.71 0.29 -0.33
25 AT3G14840 Leucine-rich repeat transmembrane protein kinase -0.71 0.3 -0.33
26 AT4G35300 tonoplast monosaccharide transporter2 tonoplast monosaccharide
transporter2		 0.71 0.31 -0.31
27 AT3G20560 PDI-like 5-3 ARABIDOPSIS THALIANA PROTEIN
DISULFIDE ISOMERASE 12, PDI-like
5-3, PROTEIN DISULFIDE ISOMERASE
12, PDI-like 5-3		 -0.71 0.3 -0.31
28 AT5G57040 Lactoylglutathione lyase / glyoxalase I family protein 0.71 0.3 -0.3
29 AT4G18800 RAB GTPase homolog A1D ATHSGBP, ATRAB11B, RAB GTPase
homolog A1D, RAB GTPase homolog
A1D		 -0.7 0.31 -0.33
30 AT4G34770 SAUR-like auxin-responsive protein family -0.7 0.35 -0.31
31 AT3G12600 nudix hydrolase homolog 16 nudix hydrolase homolog 16, nudix
hydrolase homolog 16		 -0.7 0.33 -0.32
32 AT1G64880 Ribosomal protein S5 family protein -0.7 0.33 -0.3
33 AT3G05880 Low temperature and salt responsive protein family RARE-COLD-INDUCIBLE 2A 0.7 0.34 -0.33
34 AT3G56880 VQ motif-containing protein 0.7 0.31 -0.33
35 AT5G20050 Protein kinase superfamily protein -0.7 0.31 -0.33
36 AT3G25120 Mitochondrial import inner membrane translocase subunit
Tim17/Tim22/Tim23 family protein		 -0.69 0.32 -0.3
37 AT3G54820 plasma membrane intrinsic protein 2;5 plasma membrane intrinsic protein
2;5, PLASMA MEMBRANE INTRINSIC
PROTEIN 2D		 0.69 0.3 -0.32
38 AT3G14067 Subtilase family protein 0.69 0.32 -0.32
39 AT1G70420 Protein of unknown function (DUF1645) 0.69 0.33 -0.32
40 AT2G40435 BEST Arabidopsis thaliana protein match is: transcription
regulators (TAIR:AT3G56220.1); Has 289 Blast hits to 289
proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 289; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.69 0.34 -0.31
41 AT2G24420 DNA repair ATPase-related 0.69 0.32 -0.3
42 AT2G22240 myo-inositol-1-phosphate synthase 2 INOSITOL 3-PHOSPHATE SYNTHASE 2,
MYO-INOSITOL-1-PHOSTPATE SYNTHASE
2, myo-inositol-1-phosphate
synthase 2		 0.69 0.31 -0.32
43 AT4G22130 STRUBBELIG-receptor family 8 STRUBBELIG-receptor family 8 -0.69 0.31 -0.31
44 AT3G09890 Ankyrin repeat family protein -0.68 0.3 -0.32
45 AT1G16870 mitochondrial 28S ribosomal protein S29-related -0.68 0.32 -0.32
46 AT2G37510 RNA-binding (RRM/RBD/RNP motifs) family protein -0.68 0.32 -0.32
47 AT4G22360 SWIB complex BAF60b domain-containing protein 0.68 0.29 -0.33
48 AT2G38790 unknown protein; Has 21 Blast hits to 21 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.68 0.33 -0.32
49 AT3G62940 Cysteine proteinases superfamily protein -0.68 0.29 -0.33
50 AT1G26740 Ribosomal L32p protein family -0.68 0.3 -0.33
51 AT2G24170 Endomembrane protein 70 protein family -0.68 0.32 -0.31
52 AT1G18870 isochorismate synthase 2 ARABIDOPSIS ISOCHORISMATE SYNTHASE
2, isochorismate synthase 2		 0.67 0.32 -0.31
53 AT3G23660 Sec23/Sec24 protein transport family protein -0.67 0.33 -0.32
54 AT1G51090 Heavy metal transport/detoxification superfamily protein 0.67 0.32 -0.32
55 AT3G61100 Putative endonuclease or glycosyl hydrolase -0.67 0.32 -0.33
56 AT5G01880 RING/U-box superfamily protein 0.67 0.33 -0.31
57 AT5G12270 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.67 0.3 -0.31
58 AT3G57550 guanylate kinase guanylate kinase, GUANYLATE KINAS
2		 -0.67 0.33 -0.32
59 AT5G63650 SNF1-related protein kinase 2.5 SNRK2-5, SNF1-related protein
kinase 2.5, SNF1-RELATED PROTEIN
KINASE 2H		 -0.67 0.32 -0.34
60 AT5G50810 translocase inner membrane subunit 8 translocase inner membrane subunit
8		 -0.67 0.33 -0.32
61 AT2G38960 endoplasmic reticulum oxidoreductins 2 endoplasmic reticulum
oxidoreductins 2, endoplasmic
reticulum oxidoreductins 2		 -0.66 0.31 -0.32
62 AT3G45900 Ribonuclease P protein subunit P38-related 0.66 0.32 -0.31
63 AT2G19590 ACC oxidase 1 ACC oxidase 1, ATACO1 -0.66 0.32 -0.33
64 AT3G03870 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G18130.1); Has 41 Blast hits
to 41 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 2; Fungi - 0; Plants - 39; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.66 0.31 -0.31
65 AT3G53110 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 LOW EXPRESSION OF OSMOTICALLY
RESPONSIVE GENES 4		 -0.66 0.31 -0.33
66 AT5G52660 Homeodomain-like superfamily protein 0.66 0.31 -0.3
67 AT2G21220 SAUR-like auxin-responsive protein family -0.66 0.33 -0.3
68 AT1G61740 Sulfite exporter TauE/SafE family protein -0.66 0.31 -0.31
69 AT4G32940 gamma vacuolar processing enzyme gamma vacuolar processing enzyme,
GAMMAVPE		 0.66 0.32 -0.32
70 AT4G10250 HSP20-like chaperones superfamily protein ATHSP22.0 0.65 0.33 -0.32
71 AT1G43800 Plant stearoyl-acyl-carrier-protein desaturase family
protein		 -0.65 0.31 -0.3
72 AT1G07140 Pleckstrin homology (PH) domain superfamily protein SIRANBP -0.65 0.33 -0.32
73 AT1G66070 Translation initiation factor eIF3 subunit -0.65 0.31 -0.3
74 AT1G74780 Nodulin-like / Major Facilitator Superfamily protein -0.65 0.31 -0.3
75 AT5G40040 60S acidic ribosomal protein family -0.65 0.31 -0.3
76 AT5G25220 KNOTTED1-like homeobox gene 3 KNOTTED1-like homeobox gene 3 0.65 0.29 -0.32
77 AT1G75030 thaumatin-like protein 3 thaumatin-like protein 3,
thaumatin-like protein 3		 0.65 0.34 -0.3
78 AT3G54650 RNI-like superfamily protein FBL17 -0.65 0.31 -0.32
79 AT5G47020 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G11700.2); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.65 0.31 -0.3
80 AT1G14670 Endomembrane protein 70 protein family -0.65 0.33 -0.32
81 AT5G61970 signal recognition particle-related / SRP-related -0.65 0.31 -0.29
82 AT5G27700 Ribosomal protein S21e -0.65 0.3 -0.32
83 AT1G60470 galactinol synthase 4 galactinol synthase 4, galactinol
synthase 4		 0.65 0.34 -0.34
84 AT3G04920 Ribosomal protein S24e family protein -0.64 0.31 -0.33
85 AT2G37890 Mitochondrial substrate carrier family protein -0.64 0.32 -0.31
86 AT1G20430 unknown protein; Has 29 Blast hits to 29 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.64 0.3 -0.32
87 AT2G42710 Ribosomal protein L1p/L10e family -0.64 0.32 -0.31
88 AT5G05450 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.64 0.33 -0.31
89 AT4G25220 root hair specific 15 glycerol-3-phosphate permease 2,
glycerol-3-phosphate permease 2,
root hair specific 15		 -0.64 0.31 -0.29
90 AT3G04230 Ribosomal protein S5 domain 2-like superfamily protein -0.64 0.34 -0.3
91 AT2G16990 Major facilitator superfamily protein 0.64 0.32 -0.34
92 AT5G49870 Mannose-binding lectin superfamily protein -0.64 0.32 -0.31
93 AT5G20790 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 11 plant structures;
EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis,
petal differentiation and expansion stage; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G43110.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 -0.64 0.33 -0.32
94 AT3G06930 protein arginine methyltransferase 4B ARABIDOPSIS THALIANA PROTEIN
ARGININE METHYLTRANSFERASE 4B,
protein arginine methyltransferase
4B		 -0.64 0.32 -0.31
95 AT2G37260 WRKY family transcription factor family protein ATWRKY44, DR. STRANGELOVE 1,
TRANSPARENT TESTA GLABRA 2, WRKY44		 0.64 0.28 -0.32
96 AT5G04310 Pectin lyase-like superfamily protein -0.63 0.3 -0.3
97 AT5G13110 glucose-6-phosphate dehydrogenase 2 glucose-6-phosphate dehydrogenase
2		 -0.63 0.32 -0.34
98 AT1G60190 ARM repeat superfamily protein AtPUB19, plant U-box 19 0.63 0.33 -0.31
99 AT5G62130 Per1-like family protein 0.63 0.3 -0.32
100 AT1G79900 Mitochondrial substrate carrier family protein RABIDOPSIS MITOCHONDRIAL BASIC
AMINO ACID CARRIER 2, BAC2		 0.63 0.31 -0.31
101 AT5G24830 Tetratricopeptide repeat (TPR)-like superfamily protein -0.63 0.3 -0.34
102 AT5G20820 SAUR-like auxin-responsive protein family -0.63 0.32 -0.31
103 AT1G80450 VQ motif-containing protein 0.63 0.32 -0.31
104 AT1G29880 glycyl-tRNA synthetase / glycine--tRNA ligase -0.63 0.31 -0.34
105 AT3G49860 ADP-ribosylation factor-like A1B ADP-ribosylation factor-like A1B,
ADP-ribosylation factor-like A1B		 -0.63 0.34 -0.34
106 AT3G53980 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.63 0.33 -0.31
107 AT4G07820 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 -0.62 0.32 -0.29
108 AT2G46070 mitogen-activated protein kinase 12 ATMPK12, MAPK12, mitogen-activated
protein kinase 12		 0.62 0.29 -0.31
109 AT5G39350 Tetratricopeptide repeat (TPR)-like superfamily protein -0.62 0.31 -0.29
110 AT3G48970 Heavy metal transport/detoxification superfamily protein -0.62 0.33 -0.32
111 AT5G06630 proline-rich extensin-like family protein -0.62 0.3 -0.32
112 AT4G31470 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 -0.62 0.3 -0.32
113 AT3G18510 unknown protein; Has 15 Blast hits to 15 proteins in 9
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.62 0.31 -0.31
114 AT4G32840 phosphofructokinase 6 phosphofructokinase 6 -0.62 0.31 -0.3
115 AT5G60720 Protein of unknown function, DUF547 0.62 0.3 -0.32
116 AT5G59160 type one serine/threonine protein phosphatase 2 PROTOPORPHYRINOGEN OXIDASE, type
one serine/threonine protein
phosphatase 2		 -0.62 0.32 -0.31
117 AT2G20585 nuclear fusion defective 6 NUCLEAR FUSION DEFECTIVE 6 -0.62 0.3 -0.3
118 AT5G14420 RING domain ligase2 RING domain ligase2 0.62 0.33 -0.31
119 AT5G14040 phosphate transporter 3;1 phosphate transporter 3;1 -0.62 0.31 -0.33
120 AT2G26240 Transmembrane proteins 14C -0.62 0.3 -0.3
121 AT5G53980 homeobox protein 52 homeobox protein 52, homeobox
protein 52		 -0.62 0.32 -0.32
122 AT4G27590 Heavy metal transport/detoxification superfamily protein -0.62 0.31 -0.32
123 AT4G22720 Actin-like ATPase superfamily protein -0.62 0.31 -0.32
124 AT3G07070 Protein kinase superfamily protein -0.62 0.34 -0.31
125 AT3G12250 TGACG motif-binding factor 6 BZIP45, TGACG motif-binding factor
6		 0.62 0.31 -0.29
126 AT1G63420 Arabidopsis thaliana protein of unknown function (DUF821) 0.61 0.32 -0.32
127 AT3G19270 cytochrome P450, family 707, subfamily A, polypeptide 4 cytochrome P450, family 707,
subfamily A, polypeptide 4		 0.61 0.31 -0.3
128 AT5G62470 myb domain protein 96 MYB DOMAIN PROTEIN 96, myb domain
protein 96, MYBCOV1		 0.61 0.3 -0.33
129 AT3G45680 Major facilitator superfamily protein 0.61 0.28 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
130 C0225 Raffinose D-(+)-Raffinose Raffinose ajugose biosynthesis II (galactinol-independent),
stachyose biosynthesis,
stachyose degradation 		0.76 0.48 -0.43 C0225