AT1G04080 : PRP39
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT1G04080
Description Tetratricopeptide repeat (TPR)-like superfamily protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G04080 Tetratricopeptide repeat (TPR)-like superfamily protein PRP39 1 0.33 -0.3
2 AT3G58510 DEA(D/H)-box RNA helicase family protein 0.79 0.3 -0.3
3 AT2G40700 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.77 0.3 -0.33
4 AT1G29940 nuclear RNA polymerase A2 nuclear RNA polymerase A2 0.77 0.31 -0.32
5 AT1G31970 DEA(D/H)-box RNA helicase family protein STRESS RESPONSE SUPPRESSOR 1 0.76 0.31 -0.32
6 AT5G17440 LUC7 related protein 0.76 0.31 -0.33
7 AT3G61590 Galactose oxidase/kelch repeat superfamily protein HS, HAWAIIAN SKIRT 0.76 0.31 -0.34
8 AT3G16840 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.76 0.31 -0.3
9 AT1G63810 CONTAINS InterPro DOMAIN/s: Nrap protein
(InterPro:IPR005554); Has 396 Blast hits to 382 proteins in
182 species: Archae - 3; Bacteria - 2; Metazoa - 142; Fungi
- 146; Plants - 43; Viruses - 0; Other Eukaryotes - 60
(source: NCBI BLink).		 0.75 0.33 -0.31
10 AT2G17670 Tetratricopeptide repeat (TPR)-like superfamily protein 0.75 0.31 -0.32
11 AT1G53510 mitogen-activated protein kinase 18 ARABIDOPSIS THALIANA MAP KINASE
18, mitogen-activated protein
kinase 18		 0.75 0.32 -0.31
12 AT3G14120 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
transport; LOCATED IN: nuclear pore; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Nuclear pore protein 84/107
(InterPro:IPR007252); Has 5399 Blast hits to 5001 proteins
in 612 species: Archae - 19; Bacteria - 730; Metazoa -
2186; Fungi - 823; Plants - 382; Viruses - 37; Other
Eukaryotes - 1222 (source: NCBI BLink).		 0.75 0.31 -0.3
13 AT5G09330 NAC domain containing protein 82 NAC domain containing protein 82,
NAC domain containing protein 82,
VND-interacting 1		 0.74 0.31 -0.31
14 AT3G52140 tetratricopeptide repeat (TPR)-containing protein 0.74 0.31 -0.34
15 AT1G63780 Ribosomal RNA processing Brix domain protein IMP4 0.73 0.32 -0.3
16 AT2G43650 Sas10/U3 ribonucleoprotein (Utp) family protein EMBRYO DEFECTIVE 2777 0.73 0.29 -0.32
17 AT3G49890 unknown protein; Has 27 Blast hits to 27 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0;
Plants - 21; Viruses - 0; Other Eukaryotes - 3 (source:
NCBI BLink).		 0.73 0.33 -0.32
18 AT2G37310 Pentatricopeptide repeat (PPR) superfamily protein 0.72 0.3 -0.3
19 AT2G38770 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 EMBRYO DEFECTIVE 2765 0.72 0.32 -0.32
20 AT5G58370 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.72 0.32 -0.32
21 AT3G24080 KRR1 family protein 0.72 0.29 -0.34
22 AT4G12750 Homeodomain-like transcriptional regulator 0.71 0.31 -0.33
23 AT2G13540 ARM repeat superfamily protein ABA HYPERSENSITIVE 1, ATCBP80,
CAP-BINDING PROTEIN 80, ENSALADA		 0.71 0.31 -0.32
24 AT5G37670 HSP20-like chaperones superfamily protein -0.71 0.3 -0.31
25 AT3G54980 Pentatricopeptide repeat (PPR) superfamily protein 0.7 0.31 -0.3
26 AT1G80070 Pre-mRNA-processing-splicing factor EMBRYO DEFECTIVE 14, EMBRYO
DEFECTIVE 177, EMBRYO DEFECTIVE
33, ABNORMAL SUSPENSOR 2		 0.7 0.3 -0.31
27 AT1G04770 Tetratricopeptide repeat (TPR)-like superfamily protein -0.69 0.3 -0.32
28 AT1G72560 ARM repeat superfamily protein PAUSED 0.69 0.31 -0.3
29 AT4G32420 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 0.69 0.35 -0.3
30 AT1G76810 eukaryotic translation initiation factor 2 (eIF-2) family
protein		 0.68 0.28 -0.32
31 AT5G52950 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.68 0.3 -0.32
32 AT5G62600 ARM repeat superfamily protein modifier of snc1-1, 14 0.68 0.33 -0.32
33 AT1G80410 tetratricopeptide repeat (TPR)-containing protein EMBRYO DEFECTIVE 2753, OMISHA 0.68 0.31 -0.35
34 AT1G23130 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.68 0.32 -0.29
35 AT3G07660 Kinase-related protein of unknown function (DUF1296) 0.68 0.33 -0.32
36 AT4G19610 nucleotide binding;nucleic acid binding;RNA binding 0.67 0.32 -0.33
37 AT3G26370 O-fucosyltransferase family protein 0.67 0.31 -0.33
38 AT1G25350 glutamine-tRNA ligase, putative / glutaminyl-tRNA
synthetase, putative / GlnRS, putative		 ovule abortion 9 0.67 0.32 -0.31
39 AT1G35220 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 313
Blast hits to 185 proteins in 75 species: Archae - 0;
Bacteria - 0; Metazoa - 200; Fungi - 0; Plants - 67;
Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink).		 0.67 0.32 -0.31
40 AT1G48420 D-cysteine desulfhydrase 1-AMINOCYCLOPROPANE-1-CARBOXYLIC
ACID DEAMINASE 1, A. THALIANA
1-AMINOCYCLOPROPANE-1-CARBOXYLIC
ACID DEAMINASE 1, D-cysteine
desulfhydrase, D-cysteine
desulfhydrase		 -0.66 0.31 -0.31
41 AT1G11940 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.66 0.32 -0.3
42 AT3G56360 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G05250.1); Has 45 Blast
hits to 45 proteins in 13 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.64 0.33 -0.31
43 AT2G39435 Phosphatidylinositol N-acetyglucosaminlytransferase subunit
P-related		 -0.63 0.31 -0.3
44 AT4G27470 RING membrane-anchor 3 ATRMA3, RING membrane-anchor 3 -0.63 0.33 -0.33
45 AT1G77990 STAS domain / Sulfate transporter family AST56, SULPHATE TRANSPORTER 2;2 -0.63 0.31 -0.3
46 AT5G10960 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 -0.63 0.34 -0.31
47 AT5G56610 Phosphotyrosine protein phosphatases superfamily protein -0.62 0.32 -0.34
48 AT1G11840 glyoxalase I homolog glyoxalase I homolog, glyoxalase I
homolog		 -0.62 0.32 -0.31
49 AT2G35950 embryo sac development arrest 12 embryo sac development arrest 12 -0.62 0.3 -0.33
50 AT4G15870 terpene synthase 1 terpene synthase 1, terpene
synthase 1		 -0.61 0.31 -0.32
51 AT5G11910 alpha/beta-Hydrolases superfamily protein -0.6 0.31 -0.33
52 AT1G35515 high response to osmotic stress 10 high response to osmotic stress
10, MYB8		 -0.6 0.34 -0.3
53 AT2G14110 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.59 0.31 -0.31
54 AT3G18295 Protein of unknown function (DUF1639) -0.59 0.32 -0.33
55 AT3G28940 AIG2-like (avirulence induced gene) family protein -0.58 0.29 -0.3
56 AT2G42390 protein kinase C substrate, heavy chain-related -0.58 0.3 -0.33
57 AT1G41797 transposable element gene -0.58 0.32 -0.32
58 AT5G04740 ACT domain-containing protein ACT domain repeats 12 -0.57 0.32 -0.33
59 AT5G23460 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.57 0.31 -0.32
60 AT2G15520 transposable element gene -0.57 0.31 -0.31
61 AT5G62610 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.57 0.31 -0.32
62 AT3G16990 Haem oxygenase-like, multi-helical -0.56 0.33 -0.33
63 AT5G49750 Leucine-rich repeat (LRR) family protein -0.56 0.32 -0.32
64 AT4G07540 transposable element gene -0.56 0.34 -0.33
65 AT1G32840 transposable element gene -0.56 0.34 -0.33
66 AT2G27280 Coiled-coil domain-containing protein 55 (DUF2040) -0.55 0.32 -0.31
67 AT1G21770 Acyl-CoA N-acyltransferases (NAT) superfamily protein -0.55 0.3 -0.3
68 AT3G24500 multiprotein bridging factor 1C ATMBF1C, multiprotein bridging
factor 1C		 -0.55 0.31 -0.33