AT1G55540 : -
Query Information
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AGICode AT1G55540
Description Nuclear pore complex protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G55540 Nuclear pore complex protein 1 0.3 -0.32
2 AT3G54840 Ras-related small GTP-binding family protein ARA-6, ARA6, ATRAB5C, ATRABF1,
RABF1		 -0.81 0.32 -0.32
3 AT4G07390 Mannose-P-dolichol utilization defect 1 protein -0.8 0.31 -0.34
4 AT5G07470 peptidemethionine sulfoxide reductase 3 ARABIDOPSIS THALIANA METHIONINE
SULFOXIDE REDUCTASE 3,
peptidemethionine sulfoxide
reductase 3		 -0.79 0.3 -0.32
5 AT4G20330 Transcription initiation factor TFIIE, beta subunit -0.78 0.3 -0.29
6 AT5G22950 SNF7 family protein VPS24.1 -0.78 0.31 -0.33
7 AT3G18430 Calcium-binding EF-hand family protein -0.77 0.3 -0.31
8 AT1G06800 alpha/beta-Hydrolases superfamily protein phospholipase A I gamma 1 -0.77 0.33 -0.33
9 AT1G17080 Ribosomal protein L18ae family -0.76 0.3 -0.31
10 AT1G43010 Pentatricopeptide repeat (PPR) superfamily protein 0.76 0.34 -0.32
11 AT1G55920 serine acetyltransferase 2;1 serine acetyltransferase 2;1,
SERINE ACETYLTRANSFERASE 1, SERINE
ACETYLTRANSFERASE 5, serine
acetyltransferase 2;1		 -0.76 0.3 -0.33
12 AT5G34850 purple acid phosphatase 26 PURPLE ACID PHOSPHATASE 26, purple
acid phosphatase 26		 -0.75 0.33 -0.31
13 AT5G51040 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF339 (InterPro:IPR005631); Has 532 Blast
hits to 532 proteins in 207 species: Archae - 0; Bacteria -
285; Metazoa - 16; Fungi - 41; Plants - 40; Viruses - 0;
Other Eukaryotes - 150 (source: NCBI BLink).		 -0.75 0.32 -0.32
14 AT1G45150 unknown protein; Has 219 Blast hits to 202 proteins in 78
species: Archae - 0; Bacteria - 166; Metazoa - 0; Fungi -
0; Plants - 36; Viruses - 0; Other Eukaryotes - 17 (source:
NCBI BLink).		 -0.75 0.33 -0.32
15 AT4G05530 indole-3-butyric acid response 1 indole-3-butyric acid response 1,
SHORT-CHAIN
DEHYDROGENASE/REDUCTASE A		 -0.75 0.31 -0.31
16 AT4G22920 non-yellowing 1 NON-YELLOWING 1, NON-YELLOWING 1 -0.75 0.32 -0.33
17 AT5G43280 delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 delta(3,5),delta(2,4)-dienoyl-CoA
isomerase 1,
delta(3,5),delta(2,4)-dienoyl-CoA
isomerase 1,
DELTA(3,5),DELTA(2,4)-DIENOYL-COA
ISOMERASE 1		 -0.75 0.3 -0.3
18 AT1G16180 Serinc-domain containing serine and sphingolipid
biosynthesis protein		 -0.75 0.32 -0.31
19 AT3G28950 AIG2-like (avirulence induced gene) family protein -0.75 0.3 -0.32
20 AT3G45310 Cysteine proteinases superfamily protein -0.74 0.32 -0.31
21 AT3G17880 tetraticopeptide domain-containing thioredoxin ARABIDOPSIS THALIANA
HSP70-INTERACTING PROTEIN 2,
tetraticopeptide domain-containing
thioredoxin, HSC-70 INTERACTING
PROTEIN, tetraticopeptide
domain-containing thioredoxin		 -0.74 0.32 -0.32
22 AT1G47128 Granulin repeat cysteine protease family protein responsive to dehydration 21,
RESPONSIVE TO DEHYDRATION 21A		 -0.74 0.3 -0.32
23 AT1G47420 succinate dehydrogenase 5 succinate dehydrogenase 5 -0.74 0.29 -0.29
24 AT1G49300 RAB GTPase homolog G3E ARABIDOPSIS RAB GTPASE HOMOLOG 7,
ARABIDOPSIS RAB GTPASE HOMOLOG
G3E, RAB GTPase homolog G3E		 -0.73 0.3 -0.34
25 AT3G09085 Protein of unknown function (DUF962) -0.73 0.3 -0.3
26 AT3G47810 Calcineurin-like metallo-phosphoesterase superfamily
protein		 ATVPS29, MAIGO 1, VACUOLAR PROTEIN
SORTING 29		 -0.73 0.34 -0.32
27 AT1G48440 B-cell receptor-associated 31-like -0.73 0.33 -0.31
28 AT3G27430 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
superfamily protein		 PBB1 -0.73 0.31 -0.31
29 AT5G64370 beta-ureidopropionase beta-ureidopropionase, PYRIMIDINE
3		 -0.73 0.3 -0.33
30 AT5G12890 UDP-Glycosyltransferase superfamily protein -0.73 0.31 -0.32
31 AT1G32790 CTC-interacting domain 11 CTC-interacting domain 11 -0.73 0.32 -0.31
32 AT3G57430 Tetratricopeptide repeat (TPR)-like superfamily protein ORGANELLE TRANSCRIPT PROCESSING 84 0.73 0.31 -0.33
33 AT2G39780 ribonuclease 2 ribonuclease 2 -0.73 0.3 -0.32
34 AT3G03890 FMN binding -0.72 0.31 -0.3
35 AT5G59140 BTB/POZ domain-containing protein -0.72 0.33 -0.33
36 AT1G29040 unknown protein; LOCATED IN: chloroplast, vacuole;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Conserved
hypothetical protein CHP02058 (InterPro:IPR011719); Has 344
Blast hits to 344 proteins in 122 species: Archae - 2;
Bacteria - 227; Metazoa - 0; Fungi - 0; Plants - 32;
Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink).		 -0.72 0.32 -0.31
37 AT2G35010 thioredoxin O1 thioredoxin O1, thioredoxin O1 -0.72 0.32 -0.32
38 AT4G33780 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15
growth stages; BEST Arabidopsis thaliana protein match is:
short hypocotyl in white light1 (TAIR:AT1G69935.1); Has 40
Blast hits to 40 proteins in 10 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.72 0.3 -0.33
39 AT1G11280 S-locus lectin protein kinase family protein 0.72 0.32 -0.33
40 AT1G44790 ChaC-like family protein -0.72 0.29 -0.33
41 AT4G29490 Metallopeptidase M24 family protein -0.72 0.31 -0.33
42 AT3G53970 proteasome inhibitor-related -0.72 0.31 -0.31
43 AT5G40740 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.72 0.32 -0.32
44 AT5G45130 RAB homolog 1 ARABIDOPSIS RAB HOMOLOG F2A,
ATRAB5A, ATRABF2A, RAB HOMOLOG
F2A, RAB5A, RABF2A, RAB homolog 1		 -0.72 0.32 -0.3
45 AT3G63080 glutathione peroxidase 5 glutathione peroxidase 5,
glutathione peroxidase 5, maternal
effect embryo arrest 42		 -0.71 0.33 -0.31
46 AT4G22260 Alternative oxidase family protein IMMUTANS, IM1 -0.71 0.31 -0.32
47 AT1G70690 Receptor-like protein kinase-related family protein HOPW1-1-INDUCED GENE1,
PLASMODESMATA-LOCATED PROTEIN 5		 -0.71 0.31 -0.3
48 AT2G02040 peptide transporter 2 ARABIDOPSIS THALIANA PEPTIDE
TRANSPORTER 2, ATPTR2-B, NITRATE
TRANSPORTER 1, peptide transporter
2, PTR2-B		 -0.71 0.32 -0.32
49 AT5G09830 BolA-like family protein -0.71 0.31 -0.31
50 AT3G17940 Galactose mutarotase-like superfamily protein -0.71 0.33 -0.33
51 AT2G25280 CONTAINS InterPro DOMAIN/s: UPF0103/Mediator of
ErbB2-driven cell motility (Memo), related
(InterPro:IPR002737); Has 1074 Blast hits to 1072 proteins
in 474 species: Archae - 213; Bacteria - 366; Metazoa -
159; Fungi - 135; Plants - 54; Viruses - 0; Other
Eukaryotes - 147 (source: NCBI BLink).		 -0.71 0.3 -0.32
52 AT3G25500 formin homology 1 formin homology 1, AHF1,
ARABIDOPSIS THALIANA FORMIN
HOMOLOGY 1, FORMIN HOMOLOGY 1		 0.71 0.29 -0.32
53 AT2G18950 homogentisate phytyltransferase 1 HOMOGENTISATE PHYTYLTRANSFERASE,
homogentisate phytyltransferase 1,
TPT1, VITAMIN E 2		 -0.71 0.3 -0.33
54 AT2G24200 Cytosol aminopeptidase family protein -0.71 0.31 -0.31
55 AT1G06400 Ras-related small GTP-binding family protein ARA-2, ARA2, ATRAB11E, ARABIDOPSIS
THALIANA RAB GTPASE HOMOLOG A1A		 -0.71 0.33 -0.3
56 AT5G16440 isopentenyl diphosphate isomerase 1 isopentenyl diphosphate isomerase
1		 -0.71 0.3 -0.31
57 AT5G16050 general regulatory factor 5 GF14 UPSILON, general regulatory
factor 5		 -0.71 0.34 -0.31
58 AT4G13360 ATP-dependent caseinolytic (Clp) protease/crotonase family
protein		 -0.71 0.31 -0.31
59 AT5G21090 Leucine-rich repeat (LRR) family protein -0.71 0.31 -0.31
60 AT3G14730 Pentatricopeptide repeat (PPR) superfamily protein 0.71 0.3 -0.32
61 AT1G12140 flavin-monooxygenase glucosinolate S-oxygenase 5 flavin-monooxygenase glucosinolate
S-oxygenase 5		 -0.71 0.31 -0.33
62 AT1G33490 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF2062 (InterPro:IPR018639); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G10140.1); Has 88 Blast hits to 88 proteins in 29
species: Archae - 0; Bacteria - 28; Metazoa - 0; Fungi - 0;
Plants - 54; Viruses - 0; Other Eukaryotes - 6 (source:
NCBI BLink).		 -0.71 0.33 -0.32
63 AT1G64850 Calcium-binding EF hand family protein -0.71 0.29 -0.31
64 AT4G01897 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF952 (InterPro:IPR009297); Has 763 Blast
hits to 763 proteins in 180 species: Archae - 0; Bacteria -
351; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0;
Other Eukaryotes - 383 (source: NCBI BLink).		 -0.7 0.33 -0.33
65 AT2G46080 CONTAINS InterPro DOMAIN/s: Protein BYPASS related
(InterPro:IPR008511); BEST Arabidopsis thaliana protein
match is: Protein of unknown function (DUF793)
(TAIR:AT1G01550.2); Has 153 Blast hits to 139 proteins in
20 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi -
0; Plants - 150; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.7 0.35 -0.3
66 AT5G40060 Disease resistance protein (NBS-LRR class) family 0.7 0.34 -0.31
67 AT3G03740 BTB-POZ and MATH domain 4 BTB-POZ AND MATH DOMAIN 4, BTB-POZ
and MATH domain 4		 -0.7 0.33 -0.33
68 AT1G10500 chloroplast-localized ISCA-like protein chloroplast-localized ISCA-like
protein, chloroplast-localized
ISCA-like protein		 -0.7 0.34 -0.3
69 AT5G13810 Glutaredoxin family protein -0.7 0.31 -0.32
70 AT1G17460 TRF-like 3 TRF-like 3 0.7 0.32 -0.32
71 AT3G50900 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G66490.1); Has 45 Blast hits
to 45 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.7 0.33 -0.31
72 AT5G47760 2-phosphoglycolate phosphatase 2 2-phosphoglycolate phosphatase 2,
ATPK5, PGLP2, 2-phosphoglycolate
phosphatase 2		 -0.7 0.31 -0.31
73 AT1G01820 peroxin 11c peroxin 11c -0.7 0.31 -0.31
74 AT1G06740 transposable element gene 0.7 0.32 -0.29
75 AT2G36330 Uncharacterised protein family (UPF0497) -0.7 0.31 -0.33
76 AT5G52210 GTP-binding protein 1 ATARLB1, GTP-binding protein 1,
GTP-binding protein 1		 -0.69 0.33 -0.32
77 AT5G40370 Glutaredoxin family protein glutaredoxin C2 -0.69 0.32 -0.33
78 AT3G10260 Reticulon family protein -0.69 0.3 -0.32
79 AT1G09430 ATP-citrate lyase A-3 ATP-citrate lyase A-3 -0.69 0.35 -0.3
80 AT3G20010 SNF2 domain-containing protein / helicase domain-containing
protein / zinc finger protein-related		 0.69 0.3 -0.31
81 AT2G29890 villin-like 1 ATVLN1, villin 1 0.69 0.32 -0.3
82 AT3G23490 cyanase cyanase -0.69 0.32 -0.33
83 AT1G79810 Pex2/Pex12 N-terminal domain-containing protein / zinc
finger (C3HC4-type RING finger) family protein		 ARABIDOPSIS PEROXIN 2, PEROXIN 2,
REVERSAL OF THE DET PHENOTYPE 3		 -0.69 0.29 -0.3
84 AT2G26800 Aldolase superfamily protein -0.69 0.3 -0.31
85 AT3G10920 manganese superoxide dismutase 1 ARABIDOPSIS MANGANESE SUPEROXIDE
DISMUTASE 1, MATERNAL EFFECT
EMBRYO ARREST 33, manganese
superoxide dismutase 1		 -0.69 0.31 -0.33
86 AT2G47470 thioredoxin family protein ARABIDOPSIS THALIANA PROTEIN
DISULFIDE ISOMERASE 11, PDI-LIKE
2-1, MATERNAL EFFECT EMBRYO ARREST
30, PROTEIN DISULFIDE ISOMERASE
11, UNFERTILIZED EMBRYO SAC 5		 -0.69 0.3 -0.31
87 AT2G01710 Chaperone DnaJ-domain superfamily protein -0.69 0.32 -0.34
88 AT2G01540 Calcium-dependent lipid-binding (CaLB domain) family
protein		 -0.69 0.3 -0.33
89 AT5G42300 ubiquitin-like protein 5 ubiquitin-like protein 5 -0.69 0.32 -0.3
90 AT2G31320 poly(ADP-ribose) polymerase 2 ATPARP2, poly(ADP-ribose)
polymerase 2		 0.68 0.29 -0.31
91 AT1G60570 Galactose oxidase/kelch repeat superfamily protein 0.68 0.29 -0.32
92 AT4G38780 Pre-mRNA-processing-splicing factor 0.67 0.32 -0.33
93 AT5G27240 DNAJ heat shock N-terminal domain-containing protein 0.67 0.33 -0.34
94 ATCG00300 YCF9 YCF9 0.67 0.32 -0.32
95 AT5G63920 topoisomerase 3alpha AtTOP3alpha, topoisomerase 3alpha 0.66 0.32 -0.3
96 AT4G37170 Pentatricopeptide repeat (PPR) superfamily protein 0.65 0.32 -0.34
97 AT1G17090 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant
structures; EXPRESSED DURING: 7 growth stages; Has 5 Blast
hits to 5 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.65 0.3 -0.33
98 AT2G13510 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G13500.1); Has 136 Blast hits
to 116 proteins in 8 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.64 0.32 -0.31
99 AT5G58150 Leucine-rich repeat protein kinase family protein 0.64 0.29 -0.31
100 AT4G16610 C2H2-like zinc finger protein 0.63 0.3 -0.29
101 AT1G67623 F-box family protein 0.63 0.32 -0.34
102 AT5G28700 transposable element gene 0.63 0.32 -0.32
103 AT3G61170 Tetratricopeptide repeat (TPR)-like superfamily protein 0.62 0.32 -0.32
104 AT4G01270 RING/U-box superfamily protein 0.62 0.3 -0.31
105 AT5G44850 Protein with RNI-like/FBD-like domains 0.62 0.34 -0.31
106 AT3G58160 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ATMYOS3, MYOSIN XI J, MYOSIN A3,
MYOSIN XI-16, XIJ		 0.62 0.32 -0.29
107 AT5G62670 H(+)-ATPase 11 H(+)-ATPase 11, H(+)-ATPase 11 0.62 0.33 -0.33