AT1G55530 : -
Query Information
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AGICode AT1G55530
Description RING/U-box superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G55530 RING/U-box superfamily protein 1 0.33 -0.33
2 AT5G63370 Protein kinase superfamily protein 0.77 0.31 -0.32
3 AT2G33700 Protein phosphatase 2C family protein 0.75 0.34 -0.3
4 AT4G16500 Cystatin/monellin superfamily protein 0.71 0.31 -0.3
5 AT4G21110 G10 family protein 0.71 0.32 -0.31
6 AT3G09320 DHHC-type zinc finger family protein 0.71 0.33 -0.31
7 AT5G09390 CD2-binding protein-related 0.7 0.35 -0.32
8 AT2G45980 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 25 plant
structures; EXPRESSED DURING: 15 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G00355.2); Has 93 Blast hits to 90 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 93; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 ATG8-interacting protein 1 0.7 0.3 -0.32
9 AT1G03040 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.7 0.32 -0.32
10 AT1G63830 PLAC8 family protein 0.67 0.32 -0.33
11 AT3G14070 cation exchanger 9 CATION CALCIUM EXCHANGER 3, cation
exchanger 9, CATION CALCIUM
EXCHANGER 3		 0.67 0.31 -0.31
12 AT3G53000 phloem protein 2-A15 phloem protein 2-A15, phloem
protein 2-A15		 0.66 0.32 -0.31
13 AT5G61190 putative endonuclease or glycosyl hydrolase with C2H2-type
zinc finger domain		 -0.66 0.31 -0.32
14 AT2G19350 Eukaryotic protein of unknown function (DUF872) 0.66 0.33 -0.33
15 AT3G05510 Phospholipid/glycerol acyltransferase family protein 0.66 0.3 -0.31
16 AT5G47430 DWNN domain, a CCHC-type zinc finger 0.66 0.31 -0.33
17 AT5G60910 AGAMOUS-like 8 AGAMOUS-like 8, FRUITFULL 0.66 0.3 -0.3
18 AT3G51760 Protein of unknown function (DUF688) 0.65 0.3 -0.32
19 AT3G09760 RING/U-box superfamily protein 0.65 0.32 -0.32
20 AT1G72180 Leucine-rich receptor-like protein kinase family protein 0.64 0.34 -0.31
21 AT1G34545 transposable element gene -0.64 0.3 -0.34
22 AT1G03210 Phenazine biosynthesis PhzC/PhzF protein -0.64 0.34 -0.32
23 AT3G26640 Transducin/WD40 repeat-like superfamily protein LIGHT-REGULATED WD 2 0.64 0.31 -0.32
24 AT2G18600 Ubiquitin-conjugating enzyme family protein 0.63 0.31 -0.31
25 AT4G04950 thioredoxin family protein Arabidopsis thaliana monothiol
glutaredoxin 17, monothiol
glutaredoxin 17		 0.63 0.34 -0.32
26 AT4G29140 MATE efflux family protein ACTIVATED DISEASE SUSCEPTIBILITY 1 0.63 0.32 -0.3
27 AT5G38770 glutamine dumper 7 glutamine dumper 7, glutamine
dumper 7		 -0.63 0.29 -0.3
28 AT2G44970 alpha/beta-Hydrolases superfamily protein 0.62 0.34 -0.29
29 AT5G01970 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G30050.1); Has 240 Blast hits
to 236 proteins in 72 species: Archae - 0; Bacteria - 15;
Metazoa - 51; Fungi - 19; Plants - 119; Viruses - 0; Other
Eukaryotes - 36 (source: NCBI BLink).		 -0.62 0.3 -0.3
30 AT3G48070 RING/U-box superfamily protein 0.62 0.32 -0.3
31 AT5G51410 LUC7 N_terminus domain-containing protein 0.62 0.33 -0.31
32 AT1G07530 SCARECROW-like 14 ARABIDOPSIS THALIANA GRAS (GAI,
RGA, SCR) 2, GRAS (GAI, RGA, SCR)
2, SCARECROW-like 14		 0.62 0.33 -0.33
33 AT2G13840 Polymerase/histidinol phosphatase-like 0.62 0.32 -0.31
34 AT4G32240 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.62 0.31 -0.32
35 AT2G19250 pseudogene, similar to Magnesium-chelatase subunit chlD,
chloroplast precursor (Mg- protoporphyrin IX chelatase)
(Mg-chelatase subunit D). (Common tobacco), similar to
SP|O24133 Magnesium-chelatase subunit chlD, chloroplast
precursor (Mg-protoporphyrin IX chelatase) (Mg-chelatase
subunit D) {Nicotiana tabacum}; blastp match of 78%
identity and 5.0e-07 P-value to SP|O24133|CHLD_TOBAC
Magnesium-chelatase subunit chlD, chloroplast precursor
(Mg- protoporphyrin IX chelatase) (Mg-chelatase subunit D).
(Common tobacco) {Nicotiana tabacum}		 -0.62 0.32 -0.31
36 AT3G48530 SNF1-related protein kinase regulatory subunit gamma 1 SNF1-related protein kinase
regulatory subunit gamma 1		 0.61 0.29 -0.32
37 AT4G36350 purple acid phosphatase 25 ARABIDOPSIS THALIANA PURPLE ACID
PHOSPHATASE 25, purple acid
phosphatase 25		 -0.61 0.28 -0.3
38 AT3G58060 Cation efflux family protein 0.61 0.29 -0.32
39 AT1G30900 VACUOLAR SORTING RECEPTOR 6 binding protein of 80 kDa 3;3,
VACUOLAR SORTING RECEPTOR 3;3,
VACUOLAR SORTING RECEPTOR 6		 -0.61 0.29 -0.33
40 AT3G15310 transposable element gene -0.61 0.3 -0.3
41 AT2G17900 SET domain group 37 ASH1-related 1, SET domain group
37		 -0.61 0.3 -0.34
42 AT1G68790 little nuclei3 CROWDED NUCLEI 3, LITTLE NUCLEI3 -0.61 0.31 -0.32
43 AT5G14530 Transducin/WD40 repeat-like superfamily protein 0.61 0.3 -0.31
44 AT2G34200 RING/FYVE/PHD zinc finger superfamily protein 0.61 0.31 -0.32
45 AT2G15700 transposable element gene -0.61 0.33 -0.32
46 AT3G57920 squamosa promoter binding protein-like 15 squamosa promoter binding
protein-like 15		 -0.6 0.31 -0.33
47 AT5G11530 embryonic flower 1 (EMF1) embryonic flower 1 0.6 0.32 -0.3
48 AT3G09660 minichromosome maintenance 8 minichromosome maintenance 8 -0.6 0.31 -0.32
49 AT3G57050 cystathionine beta-lyase cystathionine beta-lyase -0.6 0.29 -0.31
50 AT5G37090 transposable element gene -0.6 0.32 -0.3
51 AT4G27880 Protein with RING/U-box and TRAF-like domains 0.6 0.32 -0.32
52 AT5G37490 ARM repeat superfamily protein 0.6 0.33 -0.31
53 AT5G40450 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, plasma membrane; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 13 growth stages; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.59 0.31 -0.33
54 AT3G44270 transposable element gene 0.59 0.32 -0.33
55 AT5G35330 methyl-CPG-binding domain protein 02 ATMBD2, methyl-CPG-binding domain
protein 02, METHYL-CPG-BINDING
DOMAIN PROTEIN 2		 0.59 0.32 -0.32
56 AT4G00780 TRAF-like family protein -0.59 0.3 -0.32
57 AT2G16700 actin depolymerizing factor 5 actin depolymerizing factor 5,
ATADF5		 0.59 0.31 -0.32
58 AT1G06450 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.59 0.32 -0.31
59 AT1G53390 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ATP-binding cassette G24 -0.58 0.3 -0.31
60 AT3G13070 CBS domain-containing protein / transporter associated
domain-containing protein		 -0.58 0.32 -0.29
61 AT2G02960 RING/FYVE/PHD zinc finger superfamily protein -0.58 0.32 -0.32
62 AT2G11810 monogalactosyldiacylglycerol synthase type C ATMGD3, MONOGALACTOSYL
DIACYLGLYCEROL SYNTHASE 3,
monogalactosyldiacylglycerol
synthase type C		 -0.58 0.3 -0.32
63 AT2G43150 Proline-rich extensin-like family protein -0.58 0.31 -0.31
64 AT4G13070 RNA-binding CRS1 / YhbY (CRM) domain protein -0.57 0.33 -0.33
65 AT5G07550 glycine-rich protein 19 ATGRP19, glycine-rich protein 19 -0.57 0.3 -0.31
66 AT5G06265 hyaluronan mediated motility receptor-related -0.57 0.31 -0.34
67 AT4G13020 Protein kinase superfamily protein MHK -0.57 0.32 -0.32
68 AT3G17280 F-box and associated interaction domains-containing protein -0.56 0.33 -0.34
69 AT5G38580 FBD-like domain family protein -0.56 0.3 -0.3
70 AT2G14630 transposable element gene -0.56 0.32 -0.33
71 AT2G26360 Mitochondrial substrate carrier family protein -0.56 0.29 -0.31
72 AT3G46200 nudix hydrolase homolog 9 nudix hydrolase homolog 9, nudix
hydrolase homolog 9		 -0.56 0.3 -0.33
73 AT5G09690 magnesium transporter 7 ARABIDOPSIS THALIANA MAGNESIUM
TRANSPORTER 7, magnesium
transporter 7, MRS2-7		 -0.55 0.31 -0.31
74 AT1G11160 Transducin/WD40 repeat-like superfamily protein -0.55 0.31 -0.33
75 AT1G72420 NADH:ubiquinone oxidoreductase intermediate-associated
protein 30		 -0.55 0.33 -0.34
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
76 C0001 α-Linolenic acid - (9,12,15)-Linolenate traumatin and (Z)-3-hexen-1-yl acetate biosynthesis,
poly-hydroxy fatty acids biosynthesis,
jasmonic acid biosynthesis 		0.78 0.43 -0.44 C0001
77 C0012 n-Eicosanoic acid - Arachidate fatty acid activation,
fatty acid ω-oxidation,
sporopollenin precursor biosynthesis,
acyl-ACP thioesterase pathway,
ceramide degradation,
fatty acid α-oxidation,
fatty acid ω-oxidation,
phospholipases,
triacylglycerol degradation 		0.78 0.45 -0.46 C0012
78 C0162 MST_1588.3 - - - -0.72 0.43 -0.4
79 C0144 Maltose D-Maltose α-Maltose starch degradation II 0.7 0.42 -0.44 C0144
80 C0159 MST_1505.6 - - - -0.69 0.43 -0.45
81 C0214 PR_MST_2412.1 - - - 0.64 0.42 -0.41
82 C0213 PR_MST_2410.2 - - - 0.63 0.43 -0.45
83 C0139 Linoleic acid n-cis,cis-9,12-Octadecadienoic acid Linoleate poly-hydroxy fatty acids biosynthesis,
traumatin and (Z)-3-hexen-1-yl acetate biosynthesis,
crepenynic acid biosynthesis 		0.61 0.31 -0.31 C0139
84 C0195 Phenylpyruvic acid - Phenylpyruvate phenylalanine degradation III -0.57 0.45 -0.43 C0195
85 C0113 Histidinol - Histidinol histidine biosynthesis -0.55 0.32 -0.33 C0113