AT1G55460 : -
Query Information
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AGICode AT1G55460
Description DNA/RNA-binding protein Kin17, conserved region
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G55460 DNA/RNA-binding protein Kin17, conserved region 1 0.32 -0.33
2 AT5G16150 plastidic GLC translocator GLUCOSE TRANSPORTER 1, plastidic
GLC translocator		 0.79 0.31 -0.29
3 AT4G30930 Ribosomal protein L21 NUCLEAR FUSION DEFECTIVE 1 -0.78 0.31 -0.31
4 AT3G02190 Ribosomal protein L39 family protein -0.74 0.33 -0.33
5 AT3G20430 CONTAINS InterPro DOMAIN/s: Phosphorylated adapter RNA
export protein, RNA-binding domain (InterPro:IPR019385);
Has 110 Blast hits to 110 proteins in 51 species: Archae -
0; Bacteria - 3; Metazoa - 56; Fungi - 0; Plants - 36;
Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).		 -0.73 0.3 -0.31
6 AT5G19300 CONTAINS InterPro DOMAIN/s: Nucleic acid-binding,
OB-fold-like (InterPro:IPR016027), Protein of unknown
function DUF171 (InterPro:IPR003750); Has 3649 Blast hits
to 1964 proteins in 291 species: Archae - 113; Bacteria -
121; Metazoa - 1082; Fungi - 399; Plants - 227; Viruses -
4; Other Eukaryotes - 1703 (source: NCBI BLink).		 -0.73 0.32 -0.32
7 AT2G40830 RING-H2 finger C1A RING-H2 finger C1A 0.73 0.31 -0.33
8 AT5G04900 NYC1-like NYC1-like 0.72 0.3 -0.31
9 AT4G31810 ATP-dependent caseinolytic (Clp) protease/crotonase family
protein		 -0.72 0.32 -0.31
10 AT2G37130 Peroxidase superfamily protein -0.71 0.31 -0.32
11 AT1G14060 GCK domain-containing protein -0.71 0.32 -0.3
12 AT5G18760 RING/U-box superfamily protein 0.71 0.3 -0.31
13 AT4G36880 cysteine proteinase1 cysteine proteinase1 -0.71 0.33 -0.33
14 AT2G35605 SWIB/MDM2 domain superfamily protein -0.71 0.32 -0.3
15 AT1G14980 chaperonin 10 chaperonin 10 -0.7 0.32 -0.31
16 AT1G71980 Protease-associated (PA) RING/U-box zinc finger family
protein		 0.7 0.31 -0.29
17 AT3G52450 plant U-box 22 plant U-box 22 -0.7 0.31 -0.3
18 AT5G07250 RHOMBOID-like protein 3 RHOMBOID-like protein 3,
RHOMBOID-like protein 3		 0.7 0.32 -0.31
19 AT2G35120 Single hybrid motif superfamily protein -0.7 0.32 -0.34
20 AT3G29780 ralf-like 27 ralf-like 27 -0.69 0.34 -0.32
21 AT1G02205 Fatty acid hydroxylase superfamily ECERIFERUM 1 0.69 0.31 -0.31
22 AT5G37360 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast; EXPRESSED IN:
23 plant structures; EXPRESSED DURING: 13 growth stages;
Has 1807 Blast hits to 1807 proteins in 277 species: Archae
- 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants -
385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI
BLink).		 0.69 0.3 -0.32
23 AT3G22480 prefoldin 2 prefoldin 2 -0.69 0.3 -0.33
24 AT1G24400 lysine histidine transporter 2 AMINO ACID TRANSPORTER-LIKE
PROTEIN 2, ARABIDOPSIS LYSINE
HISTIDINE TRANSPORTER 2, lysine
histidine transporter 2		 0.69 0.3 -0.32
25 AT4G12550 Auxin-Induced in Root cultures 1 Auxin-Induced in Root cultures 1 -0.68 0.33 -0.31
26 AT3G07590 Small nuclear ribonucleoprotein family protein -0.68 0.31 -0.32
27 AT2G21045 Rhodanese/Cell cycle control phosphatase superfamily
protein		 -0.68 0.33 -0.33
28 AT2G27510 ferredoxin 3 ferredoxin 3, ferredoxin 3 -0.68 0.32 -0.31
29 AT5G62440 Protein of unknown function (DUF3223) -0.68 0.31 -0.31
30 AT1G12845 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 8 Blast hits to 8
proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.68 0.31 -0.33
31 AT3G11550 Uncharacterised protein family (UPF0497) Casparian strip membrane domain
protein 2		 -0.68 0.31 -0.32
32 AT3G04230 Ribosomal protein S5 domain 2-like superfamily protein -0.67 0.35 -0.33
33 AT3G20000 translocase of the outer mitochondrial membrane 40 translocase of the outer
mitochondrial membrane 40		 -0.67 0.3 -0.32
34 AT4G15850 RNA helicase 1 RNA helicase 1, RNA helicase 1 -0.67 0.31 -0.3
35 AT1G63120 RHOMBOID-like 2 RHOMBOID-like 2, RHOMBOID-like 2 0.67 0.3 -0.31
36 AT5G51490 Plant invertase/pectin methylesterase inhibitor superfamily -0.67 0.32 -0.3
37 AT1G19835 Plant protein of unknown function (DUF869) 0.67 0.3 -0.32
38 AT5G50920 CLPC homologue 1 ATHSP93-V, CLPC, CLPC homologue 1,
DE-REGULATED CAO ACCUMULATION 1,
HEAT SHOCK PROTEIN 93-V		 0.67 0.34 -0.31
39 AT1G02810 Plant invertase/pectin methylesterase inhibitor superfamily -0.67 0.33 -0.29
40 AT3G60360 embryo sac development arrest 14 EMBRYO SAC DEVELOPMENT ARREST 14,
U3 SMALL NUCLEOLAR RNA-ASSOCIATED
PROTEIN 11		 -0.67 0.33 -0.32
41 AT1G06460 alpha-crystallin domain 32.1 ALPHA-CRYSTALLIN DOMAIN 31.2,
alpha-crystallin domain 32.1		 0.67 0.31 -0.32
42 AT2G20770 GCR2-like 2 GCR2-like 2 0.67 0.29 -0.3
43 AT1G03380 homolog of yeast autophagy 18 (ATG18) G homolog of yeast autophagy 18
(ATG18) G, homolog of yeast
autophagy 18 (ATG18) G		 0.66 0.3 -0.31
44 AT1G70160 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G27020.1); Has 108 Blast hits to 108 proteins in
20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 89; Viruses - 0; Other Eukaryotes - 19 (source:
NCBI BLink).		 0.66 0.3 -0.29
45 AT5G51890 Peroxidase superfamily protein 0.66 0.32 -0.31
46 AT5G37300 O-acyltransferase (WSD1-like) family protein WSD1 0.66 0.34 -0.33
47 AT3G63520 carotenoid cleavage dioxygenase 1 CAROTENOID CLEAVAGE DIOXYGENASE 1,
ATNCED1, carotenoid cleavage
dioxygenase 1, NCED1		 0.66 0.32 -0.32
48 AT1G72750 translocase inner membrane subunit 23-2 translocase inner membrane subunit
23-2, translocase inner membrane
subunit 23-2		 -0.66 0.32 -0.35
49 AT3G15357 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: shoot apex,
hypocotyl, root, leaf; Has 6931 Blast hits to 2036 proteins
in 230 species: Archae - 7; Bacteria - 933; Metazoa - 1824;
Fungi - 836; Plants - 482; Viruses - 218; Other Eukaryotes
- 2631 (source: NCBI BLink).		 -0.66 0.32 -0.32
50 AT1G73470 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 72 Blast hits to 72 proteins
in 35 species: Archae - 0; Bacteria - 50; Metazoa - 0;
Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.66 0.32 -0.31
51 AT1G11670 MATE efflux family protein -0.66 0.32 -0.31
52 AT3G26740 CCR-like CCR-like 0.66 0.32 -0.32
53 AT5G06740 Concanavalin A-like lectin protein kinase family protein -0.66 0.33 -0.31
54 AT5G41010 DNA directed RNA polymerase, 7 kDa subunit NRPB12, NRPD12, NRPE12 -0.65 0.31 -0.34
55 AT2G19385 zinc ion binding -0.65 0.32 -0.32
56 AT5G03650 starch branching enzyme 2.2 starch branching enzyme 2.2 0.65 0.31 -0.33
57 AT3G03420 Ku70-binding family protein -0.65 0.34 -0.31
58 AT2G44270 repressor of lrx1 repressor of lrx1 -0.65 0.32 -0.32
59 AT2G33210 heat shock protein 60-2 heat shock protein 60-2 -0.65 0.34 -0.32
60 AT4G16750 Integrase-type DNA-binding superfamily protein 0.65 0.32 -0.31
61 AT5G16630 DNA repair protein Rad4 family ATRAD4, RAD4 0.65 0.34 -0.3
62 AT5G51210 oleosin3 oleosin3 0.65 0.31 -0.32
63 AT5G18870 Inosine-uridine preferring nucleoside hydrolase family
protein		 nucleoside hydrolase 5 0.64 0.32 -0.32
64 AT5G08590 SNF1-related protein kinase 2.1 ARABIDOPSIS SERINE/THREONINE
KINASE 2, ARABIDOPSIS SKP1-LIKE1,
SNRK2-1, SNF1-related protein
kinase 2.1, SRK2G		 0.64 0.33 -0.31
65 AT5G41180 leucine-rich repeat transmembrane protein kinase family
protein		 -0.64 0.3 -0.33
66 AT3G21360 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.64 0.31 -0.32
67 AT3G59850 Pectin lyase-like superfamily protein -0.64 0.3 -0.32
68 AT2G27370 Uncharacterised protein family (UPF0497) Casparian strip membrane domain
protein 3		 -0.64 0.31 -0.33
69 AT4G26490 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 0.64 0.32 -0.32
70 AT1G73940 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G49410.2); Has 54 Blast hits
to 54 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.64 0.3 -0.31
71 AT3G43590 zinc knuckle (CCHC-type) family protein -0.64 0.29 -0.32
72 AT2G36100 Uncharacterised protein family (UPF0497) Casparian strip membrane domain
protein 1		 -0.64 0.32 -0.32
73 AT5G42270 FtsH extracellular protease family FTSH5, VARIEGATED 1 0.64 0.29 -0.3
74 AT3G24440 Fibronectin type III domain-containing protein VIN3-LIKE 1, VERNALIZATION 5 -0.63 0.32 -0.33
75 AT2G32810 beta galactosidase 9 beta galactosidase 9,
beta-galactosidase 9		 0.63 0.31 -0.3
76 AT5G02050 Mitochondrial glycoprotein family protein -0.63 0.32 -0.32
77 AT5G26110 Protein kinase superfamily protein -0.63 0.32 -0.31
78 AT1G02900 rapid alkalinization factor 1 RAPID ALKALINIZATION FACTOR 1,
rapid alkalinization factor 1,
RALF-LIKE 1		 -0.63 0.32 -0.31
79 AT3G24210 Ankyrin repeat family protein -0.63 0.3 -0.3
80 AT1G07960 PDI-like 5-1 PDI-like 5-1, PDI-like 5-1 -0.63 0.33 -0.31
81 AT5G23840 MD-2-related lipid recognition domain-containing protein -0.63 0.33 -0.32
82 AT3G28910 myb domain protein 30 ATMYB30, myb domain protein 30 -0.63 0.31 -0.33
83 AT4G37660 Ribosomal protein L12/ ATP-dependent Clp protease adaptor
protein ClpS family protein		 -0.63 0.3 -0.32
84 AT2G28670 Disease resistance-responsive (dirigent-like protein)
family protein		 ENHANCED SUBERIN 1 -0.63 0.33 -0.31
85 AT4G29430 ribosomal protein S15A E ribosomal protein S15A E -0.62 0.31 -0.31
86 AT1G15060 Uncharacterised conserved protein UCP031088, alpha/beta
hydrolase		 0.62 0.31 -0.33
87 AT3G04710 ankyrin repeat family protein tetratricopeptide repeat 10 -0.62 0.35 -0.31
88 AT5G66390 Peroxidase superfamily protein -0.62 0.31 -0.3
89 AT5G60870 Regulator of chromosome condensation (RCC1) family protein RCC1/UVR8/GEF-like 3 -0.62 0.32 -0.33
90 AT3G45680 Major facilitator superfamily protein 0.62 0.3 -0.32
91 AT5G58750 NAD(P)-binding Rossmann-fold superfamily protein -0.62 0.33 -0.31
92 AT3G26310 cytochrome P450, family 71, subfamily B, polypeptide 35 cytochrome P450, family 71,
subfamily B, polypeptide 35		 0.62 0.34 -0.33
93 AT5G36210 alpha/beta-Hydrolases superfamily protein 0.61 0.33 -0.32
94 AT2G31960 glucan synthase-like 3 glucan synthase-like 3, ATGSL3,
GSL03, glucan synthase-like 3		 0.61 0.31 -0.35
95 AT5G39910 Pectin lyase-like superfamily protein 0.61 0.3 -0.31
96 AT1G06560 NOL1/NOP2/sun family protein -0.61 0.31 -0.34
97 AT2G34840 Coatomer epsilon subunit 0.61 0.3 -0.3
98 AT5G23180 BEST Arabidopsis thaliana protein match is: DNA-binding
storekeeper protein-related transcriptional regulator
(TAIR:AT4G01260.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.61 0.3 -0.33
99 AT5G42970 Proteasome component (PCI) domain protein ATS4, CONSTITUTIVE
PHOTOMORPHOGENIC 14, CONSTITUTIVE
PHOTOMORPHOGENIC 8, COP9
SIGNALOSOME SUBUNIT 4, EMBRYO
DEFECTIVE 134, FUSCA 4, FUSCA 8		 -0.61 0.31 -0.3
100 AT3G62810 complex 1 family protein / LVR family protein -0.61 0.32 -0.32
101 AT3G58180 ARM repeat superfamily protein -0.61 0.32 -0.32
102 AT3G23990 heat shock protein 60 heat shock protein 60, HEAT SHOCK
PROTEIN 60-3B		 -0.61 0.33 -0.29
103 AT5G60520 Late embryogenesis abundant (LEA) protein-related -0.61 0.3 -0.3
104 AT3G49845 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: root; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 WINDHOSE 3 -0.61 0.31 -0.3
105 AT1G09510 NAD(P)-binding Rossmann-fold superfamily protein 0.61 0.33 -0.32
106 AT5G56270 WRKY DNA-binding protein 2 ARABIDOPSIS THALIANA WRKY
DNA-BINDING PROTEIN 2, WRKY
DNA-binding protein 2		 0.61 0.32 -0.32
107 AT5G14510 ARM repeat superfamily protein 0.61 0.31 -0.32
108 AT5G06210 RNA binding (RRM/RBD/RNP motifs) family protein -0.61 0.33 -0.32
109 AT3G12700 Eukaryotic aspartyl protease family protein -0.61 0.29 -0.32
110 AT1G29570 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.6 0.31 -0.3
111 AT5G66110 Heavy metal transport/detoxification superfamily protein heavy metal associated
isoprenylated plant protein 27		 0.6 0.3 -0.3
112 AT2G28330 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G08035.1); Has 18 Blast hits
to 18 proteins in 6 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.6 0.31 -0.29
113 AT1G70900 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G23110.4); Has 57 Blast hits
to 57 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.6 0.31 -0.32
114 AT3G01570 Oleosin family protein 0.6 0.33 -0.3
115 AT5G55910 D6 protein kinase D6 protein kinase 0.6 0.32 -0.33
116 AT3G03620 MATE efflux family protein 0.59 0.33 -0.3
117 AT5G60220 tetraspanin4 tetraspanin4 0.59 0.32 -0.31
118 AT2G35950 embryo sac development arrest 12 embryo sac development arrest 12 0.59 0.33 -0.32
119 AT3G56350 Iron/manganese superoxide dismutase family protein 0.59 0.32 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
120 C0099 Glucose-1-phosphate α,β-D-Glucose-1-phosphate α-D-Glucose-1-phosphate; β-D-Glucose-1-phosphate galactose degradation I (Leloir pathway) 0.7 0.43 -0.44 C0099
121 C0266 Xylose D-Xylose D-Xylose xylose degradation I 0.7 0.44 -0.45 C0266
122 C0103 Glutaric acid - - - -0.68 0.43 -0.49
123 C0137 Leucine L-Leucine L-Leucine indole-3-acetyl-amino acid biosynthesis,
leucine biosynthesis,
jasmonoyl-amino acid conjugates biosynthesis I,
IAA biosynthesis II,
tRNA charging,
leucine degradation I 		0.67 0.33 -0.31 C0137