AT1G03840 : Magpie
Query Information
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AGICode AT1G03840
Description C2H2 and C2HC zinc fingers superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G03840 C2H2 and C2HC zinc fingers superfamily protein Magpie 1 0.32 -0.3
2 AT1G05260 Peroxidase superfamily protein RARE COLD INDUCIBLE GENE 3, RCI3A 0.74 0.3 -0.31
3 AT2G27370 Uncharacterised protein family (UPF0497) Casparian strip membrane domain
protein 3		 0.72 0.29 -0.32
4 AT5G42180 Peroxidase superfamily protein peroxidase 64 0.71 0.32 -0.29
5 AT5G57980 RNA polymerase II fifth largest subunit, C RNA polymerase II fifth largest
subunit, C		 0.71 0.31 -0.33
6 AT1G18880 Major facilitator superfamily protein nitrate transporter 1.9 0.71 0.3 -0.31
7 AT3G25930 Adenine nucleotide alpha hydrolases-like superfamily
protein		 0.7 0.32 -0.32
8 AT5G40630 Ubiquitin-like superfamily protein 0.69 0.32 -0.32
9 AT2G15290 translocon at inner membrane of chloroplasts 21 TRANSLOCON AT INNER MEMBRANE OF
CHLOROPLASTS 21, CHLOROPLAST
IMPORT APPARATUS 5, PERMEASE IN
CHLOROPLASTS 1, translocon at
inner membrane of chloroplasts 21		 -0.69 0.32 -0.32
10 AT1G30750 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: hypocotyl, root, pollen
tube; Has 1177 Blast hits to 607 proteins in 189 species:
Archae - 0; Bacteria - 312; Metazoa - 195; Fungi - 185;
Plants - 27; Viruses - 16; Other Eukaryotes - 442 (source:
NCBI BLink).		 0.69 0.32 -0.31
11 AT5G59520 ZRT/IRT-like protein 2 ZRT/IRT-like protein 2 0.68 0.32 -0.3
12 AT4G13235 embryo sac development arrest 21 embryo sac development arrest 21 0.68 0.32 -0.31
13 AT1G48510 Surfeit locus 1 cytochrome c oxidase biogenesis protein 0.67 0.31 -0.32
14 AT2G27000 cytochrome P450, family 705, subfamily A, polypeptide 8 cytochrome P450, family 705,
subfamily A, polypeptide 8		 0.67 0.31 -0.32
15 AT2G38270 CAX-interacting protein 2 GLUTAREDOXIN, CAX-interacting
protein 2		 -0.66 0.32 -0.29
16 AT5G64640 Plant invertase/pectin methylesterase inhibitor superfamily -0.66 0.31 -0.31
17 AT5G10130 Pollen Ole e 1 allergen and extensin family protein 0.66 0.32 -0.31
18 AT1G12845 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 8 Blast hits to 8
proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.66 0.32 -0.32
19 AT4G12060 Double Clp-N motif protein -0.65 0.31 -0.31
20 AT5G65210 bZIP transcription factor family protein TGA1 0.65 0.32 -0.32
21 AT2G38540 lipid transfer protein 1 ARABIDOPSIS THALIANA LIPID
TRANSFER PROTEIN 1, lipid transfer
protein 1, LIPID TRANSFER PROTEIN
1		 -0.65 0.33 -0.3
22 AT3G14460 LRR and NB-ARC domains-containing disease resistance
protein		 -0.65 0.31 -0.32
23 AT2G16570 GLN phosphoribosyl pyrophosphate amidotransferase 1 GLN phosphoribosyl pyrophosphate
amidotransferase 1, ATASE, GLN
phosphoribosyl pyrophosphate
amidotransferase 1		 0.65 0.31 -0.34
24 AT2G44870 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 15 growth stages; Has 39 Blast hits to 39 proteins
in 18 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi
- 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.65 0.3 -0.32
25 AT2G48130 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.64 0.31 -0.3
26 AT1G04110 Subtilase family protein STOMATAL DENSITY AND DISTRIBUTION -0.64 0.33 -0.32
27 AT4G38020 tRNA/rRNA methyltransferase (SpoU) family protein -0.64 0.3 -0.33
28 AT2G30340 LOB domain-containing protein 13 LOB domain-containing protein 13 0.64 0.32 -0.32
29 AT1G56320 BEST Arabidopsis thaliana protein match is: Glycine-rich
protein family (TAIR:AT5G49350.2); Has 60 Blast hits to 60
proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 60; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.64 0.32 -0.32
30 AT4G25370 Double Clp-N motif protein -0.64 0.29 -0.32
31 AT4G28650 Leucine-rich repeat transmembrane protein kinase family
protein		 0.64 0.33 -0.32
32 AT2G39430 Disease resistance-responsive (dirigent-like protein)
family protein		 0.64 0.31 -0.32
33 AT1G73160 UDP-Glycosyltransferase superfamily protein 0.63 0.32 -0.3
34 AT1G62800 aspartate aminotransferase 4 aspartate aminotransferase 4 0.63 0.31 -0.32
35 AT2G04025 Encodes a root meristem growth factor (RGF). Belongs to a
family of functionally redundant homologous peptides that
are secreted, tyrosine-sulfated, and expressed mainly in
the stem cell area and the innermost layer of central
columella cells. RGFs are required for maintenance of the
root stem cell niche and transit amplifying cell
proliferation. Members of this family include: At5g60810
(RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350
(RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240
(RGF7), At2g03830 (RGF8) and At5g64770 (RGF9).		 root meristem growth factor 3 0.63 0.29 -0.32
36 AT3G62270 HCO3- transporter family 0.63 0.3 -0.34
37 AT2G32300 uclacyanin 1 uclacyanin 1 0.63 0.31 -0.3
38 AT2G43670 Carbohydrate-binding X8 domain superfamily protein 0.62 0.31 -0.32
39 AT5G06060 NAD(P)-binding Rossmann-fold superfamily protein -0.62 0.3 -0.32
40 AT5G35100 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 -0.62 0.3 -0.34
41 AT5G49350 Glycine-rich protein family 0.62 0.31 -0.32
42 AT5G59610 Chaperone DnaJ-domain superfamily protein -0.62 0.32 -0.32
43 AT2G39290 phosphatidylglycerolphosphate synthase 1 phosphatidylglycerolphosphate
synthase 1,
PHOSPHATIDYLGLYCEROLPHOSPHATE
SYNTHASE 1, PGS1		 -0.62 0.31 -0.33
44 AT5G51590 AT hook motif DNA-binding family protein 0.62 0.33 -0.32
45 AT5G59330 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.62 0.35 -0.33
46 AT2G04480 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G35870.1); Has 38 Blast hits
to 38 proteins in 9 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.62 0.31 -0.32
47 AT3G22600 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.62 0.31 -0.33
48 AT2G01430 homeobox-leucine zipper protein 17 ARABIDOPSIS THALIANA
HOMEOBOX-LEUCINE ZIPPER PROTEIN
17, homeobox-leucine zipper
protein 17, homeobox-leucine
zipper protein 17		 0.62 0.33 -0.32
49 AT3G02600 lipid phosphate phosphatase 3 LIPID PHOSPHATE PHOSPHATASE 3,
lipid phosphate phosphatase 3		 -0.61 0.32 -0.32
50 AT1G74660 mini zinc finger 1 mini zinc finger 1 0.61 0.33 -0.31
51 AT5G03900 Iron-sulphur cluster biosynthesis family protein -0.61 0.31 -0.32
52 AT1G61590 Protein kinase superfamily protein 0.61 0.32 -0.31
53 AT5G42720 Glycosyl hydrolase family 17 protein -0.61 0.33 -0.34
54 AT1G69050 unknown protein; Has 9 Blast hits to 9 proteins in 4
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.61 0.31 -0.31
55 AT5G58784 Undecaprenyl pyrophosphate synthetase family protein 0.61 0.32 -0.33
56 AT1G70070 DEAD/DEAH box helicase, putative EMBRYO DEFECTIVE 25, INCREASED
SIZE EXCLUSION LIMIT 2, PIGMENT
DEFECTIVE 317		 -0.6 0.31 -0.29
57 AT4G22490 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.6 0.33 -0.31
58 AT1G19190 alpha/beta-Hydrolases superfamily protein 0.6 0.31 -0.34
59 AT4G16490 ARM repeat superfamily protein -0.6 0.31 -0.33
60 AT5G40230 nodulin MtN21 /EamA-like transporter family protein 0.59 0.32 -0.31
61 AT5G43040 Cysteine/Histidine-rich C1 domain family protein 0.59 0.31 -0.32
62 AT5G63860 Regulator of chromosome condensation (RCC1) family protein UVB-RESISTANCE 8 -0.59 0.33 -0.31
63 AT3G20830 AGC (cAMP-dependent, cGMP-dependent and protein kinase C)
kinase family protein		 0.59 0.31 -0.33
64 AT3G49845 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: root; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 WINDHOSE 3 0.59 0.33 -0.33
65 AT4G05170 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.59 0.32 -0.32
66 AT4G31100 wall-associated kinase, putative 0.59 0.3 -0.32
67 AT2G37360 ABC-2 type transporter family protein ATP-binding cassette G2 0.59 0.3 -0.3
68 AT2G33735 Chaperone DnaJ-domain superfamily protein -0.58 0.31 -0.3
69 AT4G37400 cytochrome P450, family 81, subfamily F, polypeptide 3 cytochrome P450, family 81,
subfamily F, polypeptide 3		 0.58 0.34 -0.33
70 AT1G28130 Auxin-responsive GH3 family protein GH3.17 0.58 0.33 -0.31
71 AT4G00232 DNA-binding storekeeper protein-related transcriptional
regulator		 -0.57 0.32 -0.31
72 AT2G46090 Diacylglycerol kinase family protein -0.57 0.31 -0.31
73 AT1G79970 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: Protein of unknown function (DUF581)
(TAIR:AT2G25690.2); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 -0.57 0.31 -0.33
74 AT5G54540 Uncharacterised conserved protein (UCP012943) -0.57 0.33 -0.32
75 AT5G27670 histone H2A 7 histone H2A 7 -0.56 0.31 -0.33
76 AT1G70560 tryptophan aminotransferase of Arabidopsis 1 cytokinin induced root curling 1,
SHADE AVOIDANCE 3, tryptophan
aminotransferase of Arabidopsis 1,
WEAK ETHYLENE INSENSITIVE 8		 -0.56 0.3 -0.29
77 AT3G05860 MADS-box transcription factor family protein -0.56 0.32 -0.32
78 AT1G78620 Protein of unknown function DUF92, transmembrane -0.56 0.31 -0.3
79 AT5G08540 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast, chloroplast
envelope; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 13 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.56 0.32 -0.3
80 AT5G36210 alpha/beta-Hydrolases superfamily protein -0.55 0.33 -0.32
81 AT4G11100 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G03060.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.55 0.32 -0.33
82 AT3G03400 EF hand calcium-binding protein family -0.55 0.31 -0.3
83 AT4G20900 Tetratricopeptide repeat (TPR)-like superfamily protein MALE-STERILE 5, TDM1 -0.55 0.31 -0.31
84 AT5G10620 methyltransferases -0.55 0.3 -0.32
85 AT2G44530 Phosphoribosyltransferase family protein -0.55 0.33 -0.33
86 AT1G51360 dimeric A/B barrel domainS-protein 1 DIMERIC A/B BARREL DOMAINS-PROTEIN
1, dimeric A/B barrel
domainS-protein 1		 -0.55 0.32 -0.3
87 AT4G08480 mitogen-activated protein kinase kinase kinase 9 mitogen-activated protein kinase
kinase kinase 9, MAPK/ERK KINASE
KINASE 2		 -0.55 0.3 -0.29
88 AT2G42240 RNA-binding (RRM/RBD/RNP motifs) family protein -0.55 0.33 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
89 C0008 γ-Aminobutyric acid - 4-Aminobutyrate glutamate degradation IV,
4-aminobutyrate degradation IV,
putrescine degradation IV 		0.62 0.32 -0.33 C0008
90 C0196 Phosphatidylcholine-34:3 - Phosphatidylcholine-34:3 choline biosynthesis III,
diacylglycerol biosynthesis,
phospholipases,
triacylglycerol biosynthesis,
linoleate biosynthesis I,
phosphatidylcholine biosynthesis III,
glutathione redox reactions I 		-0.55 0.44 -0.46 C0196