AT1G03960 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT1G03960
Description Calcium-binding EF hand family protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G03960 Calcium-binding EF hand family protein 1 0.3 -0.3
2 AT4G03640 transposable element gene 0.78 0.32 -0.31
3 AT3G42700 transposable element gene 0.69 0.31 -0.32
4 AT1G26860 transposable element gene -0.69 0.31 -0.32
5 AT4G33870 Peroxidase superfamily protein 0.69 0.33 -0.31
6 AT1G14850 nucleoporin 155 nucleoporin 155 0.68 0.31 -0.3
7 AT1G76810 eukaryotic translation initiation factor 2 (eIF-2) family
protein		 0.68 0.32 -0.34
8 AT3G42790 alfin-like 3 alfin-like 3 -0.67 0.32 -0.34
9 AT2G18190 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.67 0.33 -0.33
10 AT1G53090 SPA1-related 4 SPA1-related 4 0.67 0.32 -0.3
11 AT1G32290 unknown protein; Has 7 Blast hits to 5 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 1 (source: NCBI
BLink).		 0.67 0.32 -0.3
12 AT3G13820 F-box and associated interaction domains-containing protein 0.67 0.32 -0.31
13 AT4G05610 transposable element gene 0.65 0.31 -0.32
14 AT3G24315 Sec20 family protein AtSec20 -0.65 0.3 -0.31
15 AT4G04530 transposable element gene -0.65 0.33 -0.31
16 AT1G22660 Polynucleotide adenylyltransferase family protein 0.65 0.31 -0.32
17 AT4G14670 casein lytic proteinase B2 casein lytic proteinase B2 0.64 0.33 -0.33
18 AT4G39930 unknown protein; Has 4 Blast hits to 4 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.64 0.3 -0.3
19 AT2G32350 Ubiquitin-like superfamily protein 0.64 0.3 -0.3
20 AT1G32030 Domain of unknown function (DUF313) 0.63 0.32 -0.31
21 AT1G36990 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 24
plant structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G08510.1); Has 5029 Blast hits to 1779 proteins in
339 species: Archae - 2; Bacteria - 1372; Metazoa - 990;
Fungi - 933; Plants - 111; Viruses - 28; Other Eukaryotes -
1593 (source: NCBI BLink).		 0.63 0.33 -0.31
22 AT4G38760 Protein of unknown function (DUF3414) 0.63 0.33 -0.32
23 AT2G27120 DNA polymerase epsilon catalytic subunit POL2B, TILTED 2 0.63 0.32 -0.32
24 AT2G23800 geranylgeranyl pyrophosphate synthase 2 geranylgeranyl pyrophosphate
synthase 2, GERANYLGERANYL
PYROPHOSPHATE SYNTHASE 5		 -0.63 0.31 -0.33
25 AT2G45610 alpha/beta-Hydrolases superfamily protein 0.62 0.3 -0.32
26 AT4G17690 Peroxidase superfamily protein -0.62 0.32 -0.3
27 AT1G11270 F-box and associated interaction domains-containing protein -0.62 0.3 -0.32
28 AT2G34180 CBL-interacting protein kinase 13 WPL4-LIKE 2, CBL-interacting
protein kinase 13, SNF1-RELATED
PROTEIN KINASE 3.7, WPL4-LIKE 2		 -0.62 0.31 -0.31
29 AT4G16447 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.62 0.33 -0.32
30 AT5G07040 RING/U-box superfamily protein -0.62 0.3 -0.31
31 AT2G34360 MATE efflux family protein 0.62 0.33 -0.31
32 AT3G18170 Glycosyltransferase family 61 protein -0.62 0.31 -0.32
33 AT1G66170 RING/FYVE/PHD zinc finger superfamily protein MALE MEIOCYTE DEATH 1 0.61 0.32 -0.3
34 AT1G34330 pseudogene, putative peroxidase, similar to anionic
peroxidase GI:559235 from (Petroselinum crispum); blastp
match of 35% identity and 2.3e-53 P-value to
GP|21426121|gb|AAM52318.1|AC105363_7|AC105363 Putative
peroxidase {Oryza sativa (japonica cultivar-group)}		 -0.61 0.3 -0.31
35 AT3G43140 transposable element gene 0.61 0.31 -0.3
36 AT1G07460 Concanavalin A-like lectin family protein -0.61 0.32 -0.34
37 AT3G28120 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 0.61 0.31 -0.31
38 AT5G14980 alpha/beta-Hydrolases superfamily protein 0.61 0.31 -0.31
39 AT2G38280 AMP deaminase, putative / myoadenylate deaminase, putative ADENOSINE 5'-MONOPHOSPHATE
DEAMINASE, EMBRYONIC FACTOR1		 0.6 0.31 -0.33
40 AT2G22950 Cation transporter/ E1-E2 ATPase family protein auto-regulated Ca2+-ATPase 7 -0.6 0.32 -0.31
41 AT4G29530 Pyridoxal phosphate phosphatase-related protein -0.59 0.34 -0.32
42 AT1G03190 RAD3-like DNA-binding helicase protein ARABIDOPSIS THALIANA XERODERMA
PIGMENTOSUM GROUP D, ULTRAVIOLET
HYPERSENSITIVE 6		 0.59 0.31 -0.32
43 AT4G17486 PPPDE putative thiol peptidase family protein -0.59 0.32 -0.31
44 AT2G01310 BEST Arabidopsis thaliana protein match is:
cyclin-dependent protein kinase 3;2 (TAIR:AT1G47210.1); Has
37 Blast hits to 37 proteins in 6 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.59 0.33 -0.33
45 AT2G27470 nuclear factor Y, subunit B11 nuclear factor Y, subunit B11 0.59 0.32 -0.33
46 AT2G41520 Heat shock protein DnaJ with tetratricopeptide repeat tetratricopeptide repeat 15 0.59 0.31 -0.3
47 AT1G07680 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G23903.1); Has 7 Blast
hits to 7 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.59 0.3 -0.31
48 AT4G02660 Beige/BEACH domain ;WD domain, G-beta repeat protein 0.58 0.31 -0.31
49 AT5G08100 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
superfamily protein		 asparaginase A1 -0.58 0.33 -0.3
50 AT2G18760 chromatin remodeling 8 chromatin remodeling 8 0.58 0.31 -0.34
51 AT1G03457 RNA-binding (RRM/RBD/RNP motifs) family protein -0.58 0.3 -0.3
52 AT4G11440 Mitochondrial substrate carrier family protein 0.57 0.33 -0.29
53 ATMG00630 hypothetical protein ORF110B 0.57 0.31 -0.33
54 AT1G03470 Kinase interacting (KIP1-like) family protein -0.57 0.33 -0.33
55 AT3G53290 cytochrome P450, family 71, subfamily B, polypeptide 30
pseudogene		 cytochrome P450, family 71,
subfamily B, polypeptide 30
pseudogene		 -0.57 0.31 -0.32
56 AT2G46260 BTB/POZ/Kelch-associated protein -0.57 0.31 -0.34
57 AT4G28000 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.57 0.33 -0.3
58 AT3G56890 F-box associated ubiquitination effector family protein 0.57 0.28 -0.32
59 AT2G22030 Galactose oxidase/kelch repeat superfamily protein 0.57 0.32 -0.32
60 AT1G21870 golgi nucleotide sugar transporter 5 golgi nucleotide sugar transporter
5		 -0.56 0.31 -0.31
61 AT4G00460 RHO guanyl-nucleotide exchange factor 3 ATROPGEF3, RHO guanyl-nucleotide
exchange factor 3		 -0.56 0.29 -0.3
62 AT4G11780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G23020.2); Has 550 Blast hits
to 387 proteins in 92 species: Archae - 0; Bacteria - 32;
Metazoa - 132; Fungi - 122; Plants - 80; Viruses - 0; Other
Eukaryotes - 184 (source: NCBI BLink).		 -0.56 0.3 -0.31
63 AT5G11030 aberrant lateral root formation 4 ABERRANT LATERAL ROOT FORMATION 4 -0.55 0.31 -0.31
64 AT2G27410 Domain of unknown function (DUF313) -0.55 0.33 -0.32
65 AT4G33370 DEA(D/H)-box RNA helicase family protein -0.55 0.33 -0.3
66 AT2G26940 C2H2-type zinc finger family protein -0.55 0.3 -0.32
67 AT4G36000 Pathogenesis-related thaumatin superfamily protein -0.55 0.31 -0.32
68 AT2G19180 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G16840.1); Has 64 Blast hits
to 64 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.55 0.31 -0.32
69 AT5G27430 Signal peptidase subunit -0.54 0.34 -0.31
70 AT4G00560 NAD(P)-binding Rossmann-fold superfamily protein -0.54 0.31 -0.32
71 AT2G26950 myb domain protein 104 myb domain protein 104, myb domain
protein 104		 -0.54 0.32 -0.3
72 AT4G36780 BES1/BZR1 homolog 2 BES1/BZR1 homolog 2 -0.53 0.31 -0.35
73 AT4G07540 transposable element gene -0.53 0.33 -0.31
74 AT4G07660 transposable element gene -0.53 0.35 -0.32
75 AT1G15700 ATPase, F1 complex, gamma subunit protein ATPC2 -0.53 0.33 -0.33
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
76 C0228 Ribose-5-phosphate D-Ribose-5-phosphate D-Ribose-5-phosphate PRPP biosynthesis I,
Calvin-Benson-Bassham cycle,
trans-zeatin biosynthesis,
pentose phosphate pathway (non-oxidative branch),
pyridine nucleotide cycling (plants),
Rubisco shunt,
ribose degradation,
pyridoxal 5'-phosphate biosynthesis II 		-0.74 0.43 -0.47 C0228