AT1G51190 : PLETHORA 2

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AGICode	AT1G51190
Description	Integrase-type DNA-binding superfamily protein

Gene information

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	Gene Code	Description / Information	Gene name	Correlation				link
	Gene Code	Description / Information	Gene name	pcc	2.5%	97.5%	PPI	link
1	AT1G51190	Integrase-type DNA-binding superfamily protein	PLETHORA 2	1	0.32	-0.32
2	AT5G10510	AINTEGUMENTA-like 6	AINTEGUMENTA-like 6, PLETHORA 3	0.76	0.32	-0.32
3	AT5G63660	Scorpion toxin-like knottin superfamily protein	LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 74, PDF2.5	0.74	0.3	-0.3
4	AT5G53210	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	SPEECHLESS	-0.72	0.3	-0.33
5	AT2G30340	LOB domain-containing protein 13	LOB domain-containing protein 13	0.72	0.34	-0.32
6	AT5G57620	myb domain protein 36	myb domain protein 36, myb domain protein 36	0.72	0.33	-0.31
7	AT3G15240	Serine/threonine-protein kinase WNK (With No Lysine)-related		0.7	0.3	-0.34
8	AT1G12740	cytochrome P450, family 87, subfamily A, polypeptide 2	cytochrome P450, family 87, subfamily A, polypeptide 2	0.68	0.31	-0.31
9	AT3G12090	tetraspanin6	tetraspanin6	0.68	0.32	-0.32
10	AT5G48650	Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain		0.67	0.31	-0.31
11	AT4G11880	AGAMOUS-like 14	AGAMOUS-like 14	0.66	0.32	-0.28
12	AT1G34245	Putative membrane lipoprotein	EPIDERMAL PATTERNING FACTOR 2	-0.66	0.35	-0.31
13	AT5G45920	SGNH hydrolase-type esterase superfamily protein		0.66	0.3	-0.33
14	AT5G28640	SSXT family protein	ANGUSTIFOLIA 3, ARABIDOPSIS GRF1-INTERACTING FACTOR 1, GRF1-INTERACTING FACTOR, GRF1-INTERACTING FACTOR 1	0.66	0.32	-0.34
15	AT1G26680	transcriptional factor B3 family protein		0.65	0.31	-0.34
16	AT5G02420	unknown protein; Has 90 Blast hits to 90 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		0.65	0.3	-0.32
17	AT5G01870	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein		0.65	0.32	-0.31
18	AT5G12330	Lateral root primordium (LRP) protein-related	LATERAL ROOT PRIMORDIUM 1	0.65	0.32	-0.29
19	AT3G58140	phenylalanyl-tRNA synthetase class IIc family protein		-0.64	0.3	-0.33
20	AT5G17430	Integrase-type DNA-binding superfamily protein	BABY BOOM	0.64	0.31	-0.32
21	AT4G17350	Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region		0.64	0.33	-0.3
22	AT5G66700	homeobox 53	ARABIDOPSIS THALIANA HOMEOBOX 53, HOMEOBOX-8, homeobox 53	0.64	0.31	-0.31
23	AT5G27000	kinesin 4	kinesin 4, KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA D	0.64	0.31	-0.33
24	AT2G04800	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root; Has 4 Blast hits to 4 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		0.63	0.31	-0.3
25	AT1G19220	auxin response factor 19	AUXIN RESPONSE FACTOR11, auxin response factor 19, indole-3-acetic acid inducible 22	0.63	0.29	-0.33
26	AT1G76500	Predicted AT-hook DNA-binding family protein	AT-hook motif nuclear-localized protein 29, SUPPRESSOR OF PHYB-4#3	0.63	0.32	-0.3
27	AT5G48110	Terpenoid cyclases/Protein prenyltransferases superfamily protein		0.63	0.34	-0.32
28	AT1G50660	unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G20350.1); Has 21445 Blast hits to 15134 proteins in 1325 species: Archae - 461; Bacteria - 2309; Metazoa - 11052; Fungi - 1737; Plants - 1035; Viruses - 42; Other Eukaryotes - 4809 (source: NCBI BLink).		0.63	0.33	-0.32
29	AT2G37210	lysine decarboxylase family protein	LONELY GUY 3	0.62	0.33	-0.3
30	AT1G33330	Class I peptide chain release factor		-0.62	0.3	-0.33
31	AT5G06080	LOB domain-containing protein 33	LOB domain-containing protein 33	0.62	0.32	-0.31
32	AT2G01080	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family		0.62	0.31	-0.3
33	AT5G61290	Flavin-binding monooxygenase family protein		-0.62	0.29	-0.32
34	AT1G48930	glycosyl hydrolase 9C1	glycosyl hydrolase 9C1, glycosyl hydrolase 9C1	0.62	0.32	-0.35
35	AT5G60760	P-loop containing nucleoside triphosphate hydrolases superfamily protein		0.62	0.32	-0.32
36	AT4G09900	methyl esterase 12	ARABIDOPSIS THALIANA METHYL ESTERASE 12, methyl esterase 12	-0.62	0.31	-0.32
37	AT4G32910	CONTAINS InterPro DOMAIN/s: Nuclear pore complex protein, Nucleoporin Nup85-like (InterPro:IPR011502); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).		0.62	0.31	-0.33
38	AT1G14080	fucosyltransferase 6	ATFUT6, fucosyltransferase 6	0.61	0.3	-0.32
39	AT3G14210	epithiospecifier modifier 1	epithiospecifier modifier 1	-0.61	0.32	-0.28
40	AT1G13590	phytosulfokine 1 precursor	phytosulfokine 1 precursor, phytosulfokine 1 precursor	0.61	0.31	-0.3
41	AT5G14220	Flavin containing amine oxidoreductase family	HEMG2, MATERNAL EFFECT EMBRYO ARREST 61, PPO2	-0.61	0.3	-0.33
42	AT4G27260	Auxin-responsive GH3 family protein	GH3.5, WES1	0.61	0.32	-0.3
43	AT3G24450	Heavy metal transport/detoxification superfamily protein		0.6	0.33	-0.32
44	AT3G49380	IQ-domain 15	IQ-domain 15	0.6	0.3	-0.33
45	AT1G74660	mini zinc finger 1	mini zinc finger 1	0.6	0.3	-0.32
46	AT1G01030	AP2/B3-like transcriptional factor family protein	NGATHA3	-0.6	0.31	-0.32
47	AT1G79180	myb domain protein 63	MYB DOMAIN PROTEIN 63, myb domain protein 63	0.6	0.31	-0.32
48	AT2G26700	AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein	PINOID2	0.6	0.34	-0.31
49	AT3G53680	Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain		-0.6	0.34	-0.33
50	AT1G11400	partner of Y14-MAGO	partner of Y14-MAGO	0.6	0.32	-0.31
51	AT4G15120	VQ motif-containing protein		0.6	0.32	-0.31
52	AT3G01140	myb domain protein 106	myb domain protein 106, myb domain protein 106, NOECK	-0.59	0.34	-0.3
53	AT1G22990	Heavy metal transport/detoxification superfamily protein	heavy metal associated isoprenylated plant protein 22	0.59	0.33	-0.31
54	AT3G10350	P-loop containing nucleoside triphosphate hydrolases superfamily protein		-0.59	0.3	-0.3
55	AT1G32200	phospholipid/glycerol acyltransferase family protein	ACYLTRANSFERASE 1, ATS1	-0.59	0.31	-0.3
56	AT3G25900	Homocysteine S-methyltransferase family protein	ATHMT-1, HMT-1	0.59	0.3	-0.3
57	AT4G20900	Tetratricopeptide repeat (TPR)-like superfamily protein	MALE-STERILE 5, TDM1	-0.59	0.31	-0.3
58	AT1G17210	IAP-like protein 1	ARABIDOPSIS IAP-LIKE PROTEIN, IAP-like protein 1	0.59	0.3	-0.32
59	AT3G05650	receptor like protein 32	receptor like protein 32, receptor like protein 32	-0.58	0.34	-0.31
60	AT1G74040	2-isopropylmalate synthase 1	2-isopropylmalate synthase 1, SOPROPYLMALATE SYNTHASE 2, MAML-3	-0.58	0.32	-0.3
61	AT1G16500	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G79160.1); Has 136 Blast hits to 134 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 131; Viruses - 1; Other Eukaryotes - 0 (source: NCBI BLink).		-0.58	0.31	-0.31
62	AT1G78010	tRNA modification GTPase, putative		-0.58	0.32	-0.29
63	AT5G37790	Protein kinase superfamily protein		0.58	0.32	-0.31
64	AT4G31100	wall-associated kinase, putative		0.58	0.32	-0.31
65	AT3G50300	HXXXD-type acyl-transferase family protein		0.57	0.3	-0.32
66	AT4G18290	potassium channel in Arabidopsis thaliana 2	potassium channel in Arabidopsis thaliana 2	-0.57	0.33	-0.31
67	AT5G04470	cyclin-dependent protein kinase inhibitors	SIAMESE	0.57	0.33	-0.32
68	AT5G17800	myb domain protein 56	myb domain protein 56, myb domain protein 56	0.57	0.32	-0.31
69	AT1G53440	Leucine-rich repeat transmembrane protein kinase		-0.56	0.31	-0.31
70	AT5G54510	Auxin-responsive GH3 family protein	DWARF IN LIGHT 1, GH3.6	0.56	0.32	-0.3
71	AT5G52560	UDP-sugar pyrophosphorylase	UDP-sugar pyrophosphorylase, UDP-sugar pyrophosphorylase	-0.56	0.3	-0.34
72	AT1G30810	Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein		-0.56	0.32	-0.33
73	AT1G31410	putrescine-binding periplasmic protein-related		-0.56	0.31	-0.32
74	AT5G18560	Integrase-type DNA-binding superfamily protein	PUCHI	0.56	0.34	-0.31
75	AT2G16595	Translocon-associated protein (TRAP), alpha subunit		0.56	0.31	-0.31
76	AT1G66470	ROOT HAIR DEFECTIVE6	AtRHD6, ROOT HAIR DEFECTIVE6	0.55	0.32	-0.31
77	AT1G25290	RHOMBOID-like protein 10	RHOMBOID-like protein 10, RHOMBOID-like protein 10	-0.55	0.31	-0.3
78	AT2G06510	replication protein A 1A	ARABIDOPSIS THALIANA REPLICATION PROTEIN A 1A, ARABIDOPSIS THALIANA RPA70-KDA SUBUNIT A, replication protein A 1A, RPA70-KDA SUBUNIT A	0.55	0.34	-0.32
79	AT4G36710	GRAS family transcription factor	Arabidopsis thaliana HAIRY MERISTEM 4, HAM4	-0.55	0.32	-0.32
80	AT1G50840	polymerase gamma 2	polymerase gamma 2, polymerase I A	-0.55	0.31	-0.3
81	AT2G05640	transposable element gene		-0.55	0.31	-0.32
82	AT1G47990	gibberellin 2-oxidase 4	Arabidopsis thaliana gibberellin 2-oxidase 4, gibberellin 2-oxidase 4	0.55	0.3	-0.31
83	AT3G19460	Reticulon family protein		-0.54	0.33	-0.3
84	AT5G06130	chaperone protein dnaJ-related		-0.54	0.33	-0.33
85	AT1G04760	vesicle-associated membrane protein 726	vesicle-associated membrane protein 726, vesicle-associated membrane protein 726	-0.54	0.32	-0.3
86	AT5G14970	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G14910.1); Has 579 Blast hits to 397 proteins in 95 species: Archae - 0; Bacteria - 294; Metazoa - 0; Fungi - 0; Plants - 86; Viruses - 0; Other Eukaryotes - 199 (source: NCBI BLink).		-0.54	0.32	-0.31
87	AT2G22000	elicitor peptide 6 precursor	elicitor peptide 6 precursor	-0.54	0.29	-0.33

Metabolite information

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	CID	Metabolite name			Pathway Information	Correlation				link
	CID	Compound name	Stereochemistry	Aracyc name	Pathway Information	pcc	2.5%	97.5%	PPI	link
88	C0025	2-Hydroxy-3-butenylglucosinolate	(R),(S)-2-Hydroxy-3-butenylglucosinolate	2-hydroxy-3-butenylglucosinolate	glucosinolate biosynthesis from dihomomethionine	0.65	0.47	-0.45
89	C0196	Phosphatidylcholine-34:3	-	Phosphatidylcholine-34:3	choline biosynthesis III, diacylglycerol biosynthesis, phospholipases, triacylglycerol biosynthesis, linoleate biosynthesis I, phosphatidylcholine biosynthesis III, glutathione redox reactions I	-0.55	0.45	-0.44

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