AT1G23820 : spermidine synthase 1
Query Information
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AGICode AT1G23820
Description spermidine synthase 1
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G23820 spermidine synthase 1 spermidine synthase 1 1 0.33 -0.3
2 AT4G16210 enoyl-CoA hydratase/isomerase A ENOYL-COA HYDRATASE 2, enoyl-CoA
hydratase/isomerase A		 0.77 0.31 -0.31
3 AT1G65010 Plant protein of unknown function (DUF827) -0.71 0.33 -0.31
4 AT1G80860 phospholipid N-methyltransferase ARABIDOPSIS PHOSPHOLIPID
N-METHYLTRANSFERASE, phospholipid
N-methyltransferase		 0.71 0.31 -0.31
5 AT1G22060 LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: FBD, F-box and Leucine Rich
Repeat domains containing protein (TAIR:AT1G22000.1); Has
84739 Blast hits to 38714 proteins in 2257 species: Archae
- 1436; Bacteria - 11314; Metazoa - 40747; Fungi - 7706;
Plants - 4675; Viruses - 308; Other Eukaryotes - 18553
(source: NCBI BLink).		 -0.71 0.33 -0.31
6 AT4G18600 SCAR family protein WASP (WISKOTT-ALDRICH SYNDROME
PROTEIN)-FAMILY VERPROLIN
HOMOLOGOUS PROTEIN 5, SCARL, WAVE5		 -0.68 0.31 -0.32
7 AT4G14410 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 basic Helix-Loop-Helix 104 0.68 0.3 -0.3
8 AT3G05070 CONTAINS InterPro DOMAIN/s: mRNA splicing factor, Cwf18
(InterPro:IPR013169); Has 292 Blast hits to 292 proteins in
153 species: Archae - 0; Bacteria - 0; Metazoa - 118; Fungi
- 83; Plants - 38; Viruses - 11; Other Eukaryotes - 42
(source: NCBI BLink).		 0.67 0.3 -0.32
9 AT4G29660 embryo defective 2752 EMBRYO DEFECTIVE 2752 0.67 0.3 -0.33
10 AT2G30000 PHF5-like protein 0.67 0.3 -0.29
11 AT3G61830 auxin response factor 18 auxin response factor 18 -0.66 0.32 -0.32
12 AT4G21650 Subtilase family protein -0.66 0.32 -0.3
13 AT1G20270 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.64 0.32 -0.31
14 AT1G44318 Aldolase superfamily protein hemb2 -0.63 0.34 -0.31
15 AT3G58180 ARM repeat superfamily protein 0.63 0.33 -0.35
16 ATCG00750 ribosomal protein S11 ribosomal protein S11 -0.63 0.31 -0.31
17 AT1G55970 histone acetyltransferase of the CBP family 4 HAC04, histone acetyltransferase
of the CBP family 4, HISTONE
ACETYLTRANSFERASE OF THE CBP
FAMILY 6, HISTONE
ACETYLTRANSFERASE OF THE GNAT/MYST
SUPERFAMILY 04, HISTONE
ACETYLTRANSFERASE OF THE GNAT/MYST
SUPERFAMILY 4		 -0.63 0.33 -0.33
18 AT2G20460 transposable element gene -0.62 0.32 -0.29
19 ATCG00760 ribosomal protein L36 ribosomal protein L36 -0.62 0.33 -0.33
20 AT5G50370 Adenylate kinase family protein 0.62 0.31 -0.31
21 ATCG00770 ribosomal protein S8 ribosomal protein S8 -0.61 0.32 -0.33
22 AT1G33070 MADS-box family protein -0.61 0.31 -0.32
23 AT1G17860 Kunitz family trypsin and protease inhibitor protein 0.61 0.3 -0.32
24 AT3G43100 transposable element gene -0.6 0.33 -0.3
25 AT3G52710 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 19 plant structures; EXPRESSED
DURING: 9 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G36220.1); Has 64 Blast
hits to 64 proteins in 10 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.6 0.34 -0.34
26 ATCG00800 structural constituent of ribosome -0.6 0.32 -0.31
27 ATCG00810 ribosomal protein L22 ribosomal protein L22 -0.6 0.31 -0.3
28 ATCG00780 ribosomal protein L14 ribosomal protein L14 -0.6 0.31 -0.3
29 AT2G25780 Protein of unknown function (DUF1677) 0.6 0.31 -0.3
30 AT4G18870 E2F/DP family winged-helix DNA-binding domain -0.6 0.3 -0.34
31 AT4G31200 SWAP (Suppressor-of-White-APricot)/surp RNA-binding
domain-containing protein		 -0.6 0.31 -0.31
32 AT1G03060 Beige/BEACH domain ;WD domain, G-beta repeat protein SPIRRIG -0.6 0.32 -0.31
33 AT5G23650 Homeodomain-like transcriptional regulator -0.59 0.31 -0.33
34 AT3G14980 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger protein		 -0.59 0.31 -0.3
35 AT3G12550 XH/XS domain-containing protein factor of DNA methylation 3 -0.59 0.31 -0.31
36 AT5G37055 HIT-type Zinc finger family protein ATSWC6, SERRATED LEAVES AND EARLY
FLOWERING		 0.59 0.31 -0.33
37 AT5G39910 Pectin lyase-like superfamily protein -0.58 0.29 -0.33
38 AT1G05630 Endonuclease/exonuclease/phosphatase family protein 5PTASE13, AT5PTASE13 -0.58 0.3 -0.32
39 AT1G31810 Formin Homology 14 Formin Homology 14 -0.58 0.32 -0.3
40 AT3G57470 Insulinase (Peptidase family M16) family protein -0.58 0.31 -0.32
41 AT2G03730 ACT domain repeat 5 ACT domain repeat 5 0.57 0.3 -0.31
42 AT4G21430 Zinc finger, RING-type;Transcription factor
jumonji/aspartyl beta-hydroxylase		 B160 -0.57 0.33 -0.3
43 AT5G13590 unknown protein; Has 150 Blast hits to 121 proteins in 42
species: Archae - 0; Bacteria - 8; Metazoa - 80; Fungi - 5;
Plants - 17; Viruses - 0; Other Eukaryotes - 40 (source:
NCBI BLink).		 -0.57 0.29 -0.31
44 AT5G57670 Protein kinase superfamily protein -0.57 0.31 -0.33
45 AT1G53210 sodium/calcium exchanger family protein / calcium-binding
EF hand family protein		 -0.57 0.31 -0.3
46 AT2G34340 Protein of unknown function, DUF584 0.57 0.34 -0.31
47 ATCG00340 Photosystem I, PsaA/PsaB protein PSAB -0.57 0.29 -0.31
48 AT4G08670 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.57 0.31 -0.31
49 AT1G22310 methyl-CPG-binding domain 8 ATMBD8, methyl-CPG-binding domain
8		 -0.57 0.31 -0.34
50 AT5G30440 transposable element gene -0.56 0.33 -0.33
51 AT1G17070 GC-rich sequence DNA-binding factor-like protein with
Tuftelin interacting domain		 -0.56 0.3 -0.32
52 AT5G65930 kinesin-like calmodulin-binding protein (ZWICHEL) KINESIN-LIKE CALMODULIN-BINDING
PROTEIN, POTATO KINESIN-LIKE
CALMODULIN-BINDING PROTEIN,
ZWICHEL		 -0.56 0.3 -0.35
53 AT2G35110 transcription activators GNARLED, NCK-ASSOCIATED PROTEIN 1,
NAPP		 -0.56 0.31 -0.32
54 AT2G27900 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein
sorting-associated protein 54 (InterPro:IPR019515); Has 316
Blast hits to 252 proteins in 92 species: Archae - 0;
Bacteria - 2; Metazoa - 200; Fungi - 2; Plants - 68;
Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).		 -0.56 0.29 -0.32
55 AT5G08130 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 BIM1 -0.55 0.31 -0.33
56 AT4G38180 FAR1-related sequence 5 FAR1-related sequence 5 -0.55 0.34 -0.31
57 AT5G40260 Nodulin MtN3 family protein AtSWEET8, SWEET8 -0.55 0.3 -0.33
58 AT4G31940 cytochrome P450, family 82, subfamily C, polypeptide 4 cytochrome P450, family 82,
subfamily C, polypeptide 4		 -0.55 0.3 -0.3
59 AT1G68790 little nuclei3 CROWDED NUCLEI 3, LITTLE NUCLEI3 -0.55 0.3 -0.31
60 AT2G36030 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.54 0.3 -0.32
61 AT1G28640 GDSL-like Lipase/Acylhydrolase superfamily protein -0.54 0.33 -0.29
62 AT2G45550 cytochrome P450, family 76, subfamily C, polypeptide 4 cytochrome P450, family 76,
subfamily C, polypeptide 4		 -0.54 0.31 -0.34
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
63 C0251 Sulfoquinovosyldiacylglycerol-36:6 - Sulfoquinovosyldiacylglycerol sulfolipid biosynthesis -0.69 0.52 -0.5 C0251
64 C0234 Sinapoyl glucose 1-O-Sinapoyl-β-D-glucose 1-O-Sinapoyl-β-D-glucose sinapate ester biosynthesis -0.68 0.45 -0.44 C0234
65 C0006 β-Homothreonine L-β-Homothreonine - - -0.6 0.47 -0.43
66 C0066 Choline - Choline choline biosynthesis III,
phosphatidylcholine biosynthesis I,
choline biosynthesis I,
glycine betaine biosynthesis III (plants),
choline biosynthesis II,
sinapate ester biosynthesis,
phospholipases 		-0.59 0.31 -0.31 C0066