AT1G05000 : AtPFA-DSP1
Query Information
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AGICode AT1G05000
Description Phosphotyrosine protein phosphatases superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G05000 Phosphotyrosine protein phosphatases superfamily protein AtPFA-DSP1, plant and fungi
atypical dual-specificity
phosphatase 1		 1 0.3 -0.32
2 AT3G55470 Calcium-dependent lipid-binding (CaLB domain) family
protein		 0.87 0.3 -0.31
3 AT1G73870 B-box type zinc finger protein with CCT domain -0.85 0.31 -0.3
4 AT5G63680 Pyruvate kinase family protein 0.85 0.32 -0.31
5 AT4G23470 PLAC8 family protein 0.84 0.33 -0.33
6 AT2G17790 VPS35 homolog A VPS35 homolog A, ZIG suppressor 3 0.84 0.29 -0.31
7 AT1G04980 PDI-like 2-2 ARABIDOPSIS THALIANA PROTEIN
DISULFIDE ISOMERASE 10, PDI-like
2-2, PROTEIN DISULFIDE ISOMERASE,
PDI-like 2-2		 0.83 0.32 -0.33
8 AT5G21105 Plant L-ascorbate oxidase 0.83 0.33 -0.34
9 AT5G11420 Protein of unknown function, DUF642 -0.83 0.3 -0.31
10 AT2G25110 stromal cell-derived factor 2-like protein precursor Arabidopsis thaliana STROMAL
CELL-DERIVED FACTOR 2-like protein
precursor, ATSDF2-LIKE, stromal
cell-derived factor 2-like protein
precursor		 0.83 0.31 -0.31
11 AT2G44350 Citrate synthase family protein ATCS, CITRATE SYNTHASE 4 0.83 0.32 -0.31
12 AT3G06420 Ubiquitin-like superfamily protein autophagy 8h 0.82 0.32 -0.27
13 AT2G34070 TRICHOME BIREFRINGENCE-LIKE 37 TRICHOME BIREFRINGENCE-LIKE 37 0.82 0.32 -0.31
14 AT5G44240 aminophospholipid ATPase 2 aminophospholipid ATPase 2 0.81 0.33 -0.31
15 AT3G05970 long-chain acyl-CoA synthetase 6 ATLACS6, long-chain acyl-CoA
synthetase 6		 0.81 0.3 -0.33
16 AT1G29670 GDSL-like Lipase/Acylhydrolase superfamily protein -0.81 0.32 -0.33
17 AT5G59350 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.81 0.32 -0.32
18 AT5G07440 glutamate dehydrogenase 2 glutamate dehydrogenase 2 0.81 0.31 -0.33
19 AT5G38710 Methylenetetrahydrofolate reductase family protein 0.81 0.32 -0.31
20 AT2G18300 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.81 0.34 -0.32
21 AT5G40690 CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site
(InterPro:IPR018247); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G41730.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.8 0.32 -0.32
22 AT1G22400 UDP-Glycosyltransferase superfamily protein ARABIDOPSIS THALIANA UDP-GLUCOSYL
TRANSFERASE 85A1, UGT85A1		 0.8 0.3 -0.32
23 AT3G45780 phototropin 1 JK224, NONPHOTOTROPIC HYPOCOTYL 1,
phototropin 1, ROOT PHOTOTROPISM 1		 -0.8 0.34 -0.32
24 AT3G16330 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G52140.1); Has 109 Blast hits
to 109 proteins in 16 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 109; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.8 0.32 -0.32
25 AT4G23740 Leucine-rich repeat protein kinase family protein -0.8 0.33 -0.32
26 AT4G00400 glycerol-3-phosphate acyltransferase 8 AtGPAT8, glycerol-3-phosphate
acyltransferase 8		 -0.8 0.32 -0.33
27 AT1G68520 B-box type zinc finger protein with CCT domain -0.79 0.33 -0.32
28 AT4G19880 Glutathione S-transferase family protein 0.79 0.31 -0.33
29 AT5G03610 GDSL-like Lipase/Acylhydrolase superfamily protein 0.79 0.32 -0.31
30 AT4G18950 Integrin-linked protein kinase family 0.79 0.33 -0.3
31 AT2G29065 GRAS family transcription factor 0.79 0.3 -0.33
32 AT5G12210 RAB geranylgeranyl transferase beta subunit 1 RAB geranylgeranyl transferase
beta subunit 1, RAB geranylgeranyl
transferase beta subunit 1		 0.79 0.32 -0.32
33 AT1G02220 NAC domain containing protein 3 NAC domain containing protein 3,
NAC domain containing protein 3		 0.79 0.3 -0.29
34 AT3G56950 small and basic intrinsic protein 2;1 SMALL AND BASIC INTRINSIC PROTEIN
2, small and basic intrinsic
protein 2;1		 0.79 0.32 -0.32
35 AT1G09300 Metallopeptidase M24 family protein 0.79 0.31 -0.33
36 AT3G59700 lectin-receptor kinase lectin-receptor kinase,
lectin-receptor kinase,
LECTIN-RECEPTOR KINASE 1		 0.78 0.31 -0.33
37 AT3G62600 DNAJ heat shock family protein ATERDJ3B, ERDJ3B 0.78 0.32 -0.32
38 AT4G16660 heat shock protein 70 (Hsp 70) family protein 0.78 0.31 -0.32
39 AT1G74470 Pyridine nucleotide-disulphide oxidoreductase family
protein		 -0.78 0.33 -0.33
40 AT5G50760 SAUR-like auxin-responsive protein family 0.78 0.29 -0.32
41 AT3G25610 ATPase E1-E2 type family protein / haloacid
dehalogenase-like hydrolase family protein		 0.78 0.35 -0.33
42 AT5G63840 Glycosyl hydrolases family 31 protein PRIORITY IN SWEET LIFE 5, RADIAL
SWELLING 3		 0.77 0.32 -0.33
43 AT1G18490 Protein of unknown function (DUF1637) -0.77 0.31 -0.34
44 AT3G11330 plant intracellular ras group-related LRR 9 plant intracellular ras
group-related LRR 9		 0.77 0.32 -0.31
45 AT4G29950 Ypt/Rab-GAP domain of gyp1p superfamily protein 0.77 0.33 -0.31
46 AT4G04340 ERD (early-responsive to dehydration stress) family protein -0.77 0.32 -0.32
47 AT4G37430 cytochrome P450, family 91, subfamily A, polypeptide 2 CYTOCHROME P450 MONOOXYGENASE
81F1, cytochrome P450, family 91,
subfamily A, polypeptide 2		 0.77 0.33 -0.33
48 AT4G26310 elongation factor P (EF-P) family protein 0.77 0.33 -0.35
49 AT1G20650 Protein kinase superfamily protein ALTERED SEED GERMINATION 5 -0.77 0.3 -0.31
50 AT1G27980 dihydrosphingosine phosphate lyase ATDPL1, dihydrosphingosine
phosphate lyase		 0.76 0.33 -0.3
51 AT4G30270 xyloglucan endotransglucosylase/hydrolase 24 MERISTEM 5, meristem-5, SENESCENCE
4, xyloglucan
endotransglucosylase/hydrolase 24		 0.76 0.33 -0.31
52 AT1G31335 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 20 plant structures; EXPRESSED
DURING: 13 growth stages; Has 34 Blast hits to 34 proteins
in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.76 0.31 -0.32
53 AT1G32170 xyloglucan endotransglucosylase/hydrolase 30 xyloglucan
endotransglucosylase/hydrolase 30,
xyloglucan endotransglycosylase 4		 0.76 0.32 -0.32
54 AT3G59710 NAD(P)-binding Rossmann-fold superfamily protein 0.76 0.32 -0.32
55 AT3G59060 phytochrome interacting factor 3-like 6 PHYTOCHROME-INTERACTING FACTOR 5,
phytochrome interacting factor
3-like 6		 -0.76 0.31 -0.32
56 AT2G43080 P4H isoform 1 P4H isoform 1 0.76 0.3 -0.31
57 AT4G38270 galacturonosyltransferase 3 galacturonosyltransferase 3 0.76 0.32 -0.32
58 AT3G50820 photosystem II subunit O-2 OXYGEN EVOLVING COMPLEX SUBUNIT 33
KDA, PHOTOSYSTEM II SUBUNIT O-2,
photosystem II subunit O-2		 -0.76 0.31 -0.32
59 AT1G11300 protein serine/threonine kinases;protein kinases;ATP
binding;sugar binding;kinases;carbohydrate binding		 -0.76 0.32 -0.31
60 AT5G26910 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G58650.1); Has 1322 Blast hits
to 684 proteins in 162 species: Archae - 4; Bacteria - 497;
Metazoa - 157; Fungi - 101; Plants - 155; Viruses - 0;
Other Eukaryotes - 408 (source: NCBI BLink).		 -0.76 0.33 -0.3
61 AT1G14180 RING/U-box superfamily protein -0.76 0.31 -0.32
62 AT2G15090 3-ketoacyl-CoA synthase 8 3-ketoacyl-CoA synthase 8 -0.76 0.34 -0.33
63 AT3G52200 Dihydrolipoamide acetyltransferase, long form protein LTA3 0.76 0.32 -0.31
64 AT2G35260 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G17840.1); Has 42 Blast
hits to 42 proteins in 14 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.76 0.33 -0.32
65 AT3G59400 enzyme binding;tetrapyrrole binding GENOMES UNCOUPLED 4 -0.76 0.31 -0.32
66 AT1G15670 Galactose oxidase/kelch repeat superfamily protein 0.76 0.31 -0.3
67 AT5G09470 dicarboxylate carrier 3 dicarboxylate carrier 3 0.75 0.32 -0.31
68 AT1G06890 nodulin MtN21 /EamA-like transporter family protein 0.75 0.32 -0.32
69 AT5G54780 Ypt/Rab-GAP domain of gyp1p superfamily protein 0.75 0.3 -0.3
70 AT4G05160 AMP-dependent synthetase and ligase family protein 0.75 0.28 -0.31
71 AT5G66330 Leucine-rich repeat (LRR) family protein -0.75 0.31 -0.3
72 AT1G21810 Plant protein of unknown function (DUF869) -0.75 0.31 -0.34
73 AT3G19970 alpha/beta-Hydrolases superfamily protein 0.75 0.29 -0.32
74 AT3G54560 histone H2A 11 histone H2A 11 -0.75 0.33 -0.32
75 AT1G24180 Thiamin diphosphate-binding fold (THDP-binding) superfamily
protein		 IAA-CONJUGATE-RESISTANT 4 0.75 0.3 -0.33
76 AT5G12880 proline-rich family protein 0.75 0.31 -0.34
77 AT4G23850 AMP-dependent synthetase and ligase family protein long-chain acyl-CoA synthetase 4 0.75 0.33 -0.32
78 AT1G61520 photosystem I light harvesting complex gene 3 photosystem I light harvesting
complex gene 3		 -0.75 0.32 -0.31
79 AT5G44790 copper-exporting ATPase / responsive-to-antagonist 1 /
copper-transporting ATPase (RAN1)		 HMA7, RESPONSIVE-TO-ANTAGONIST 1 0.74 0.31 -0.32
80 AT1G18260 HCP-like superfamily protein EMS-mutagenized bri1 suppressor 5,
HRD3A		 0.74 0.32 -0.32
81 AT4G03960 Phosphotyrosine protein phosphatases superfamily protein AtPFA-DSP4, plant and fungi
atypical dual-specificity
phosphatase 4		 0.74 0.31 -0.3
82 AT3G16000 MAR binding filament-like protein 1 MAR binding filament-like protein
1		 -0.74 0.32 -0.3
83 AT1G02970 WEE1 kinase homolog ATWEE1, WEE1 kinase homolog -0.74 0.33 -0.32
84 AT5G59580 UDP-glucosyl transferase 76E1 UDP-glucosyl transferase 76E1 0.74 0.31 -0.29
85 AT1G69880 thioredoxin H-type 8 thioredoxin H-type 8, thioredoxin
H-type 8		 0.74 0.31 -0.3
86 AT2G23450 Protein kinase superfamily protein 0.74 0.3 -0.32
87 AT1G09100 26S proteasome AAA-ATPase subunit RPT5B 26S proteasome AAA-ATPase subunit
RPT5B		 0.74 0.31 -0.32
88 AT1G21750 PDI-like 1-1 ARABIDOPSIS THALIANA PROTEIN
DISULFIDE ISOMERASE 5, PDI-like
1-1, PROTEIN DISULFIDE ISOMERASE
5, PDI-like 1-1		 0.74 0.32 -0.33
89 AT4G36470 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.74 0.31 -0.3
90 AT2G25990 unknown protein; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 -0.74 0.31 -0.3
91 AT2G14120 dynamin related protein dynamin related protein 0.74 0.32 -0.32
92 AT3G28730 high mobility group high mobility group, high mobility
group, NUCLEOSOME/CHROMATIN
ASSEMBLY FACTOR D, SSRP1		 -0.74 0.33 -0.3
93 AT2G13650 golgi nucleotide sugar transporter 1 golgi nucleotide sugar transporter
1		 0.74 0.31 -0.31
94 AT1G44446 Pheophorbide a oxygenase family protein with Rieske
[2Fe-2S] domain		 ARABIDOPSIS THALIANA CHLOROPHYLL A
OXYGENASE, CHLOROPHYLL A
OXYGENASE, CHLORINA 1		 -0.73 0.33 -0.35
95 AT2G44440 Emsy N Terminus (ENT) domain-containing protein AtEML4, EMSY-like 4 -0.73 0.31 -0.29
96 AT4G35730 Regulator of Vps4 activity in the MVB pathway protein -0.73 0.29 -0.32
97 AT5G15050 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.73 0.33 -0.31
98 AT5G11590 Integrase-type DNA-binding superfamily protein TINY2 -0.73 0.3 -0.31
99 AT2G45600 alpha/beta-Hydrolases superfamily protein -0.73 0.32 -0.34
100 AT1G67340 HCP-like superfamily protein with MYND-type zinc finger -0.73 0.32 -0.35
101 AT2G44745 WRKY family transcription factor -0.73 0.3 -0.32
102 AT1G03630 protochlorophyllide oxidoreductase C protochlorophyllide oxidoreductase
C, PORC		 -0.73 0.33 -0.33
103 AT2G28780 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: mitochondrion; EXPRESSED IN: inflorescence
meristem, root, flower; EXPRESSED DURING: petal
differentiation and expansion stage; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF939, bacterial
(InterPro:IPR010343); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G09450.1); Has 671 Blast
hits to 667 proteins in 305 species: Archae - 0; Bacteria -
588; Metazoa - 0; Fungi - 2; Plants - 66; Viruses - 0;
Other Eukaryotes - 15 (source: NCBI BLink).		 -0.73 0.33 -0.33
104 AT5G03140 Concanavalin A-like lectin protein kinase family protein -0.72 0.3 -0.31
105 AT1G54200 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G13980.1); Has 1084 Blast hits
to 581 proteins in 136 species: Archae - 0; Bacteria - 72;
Metazoa - 212; Fungi - 78; Plants - 102; Viruses - 0; Other
Eukaryotes - 620 (source: NCBI BLink).		 -0.72 0.32 -0.34
106 AT1G78580 trehalose-6-phosphate synthase trehalose-6-phosphate synthase,
trehalose-6-phosphate synthase,
TREHALOSE-6-PHOSPHATE SYNTHASE 1		 -0.72 0.32 -0.34
107 AT5G01390 DNAJ heat shock family protein -0.72 0.3 -0.3
108 AT5G38300 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 12 plant
structures; EXPRESSED DURING: 6 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G67035.2); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.72 0.3 -0.3
109 AT2G36870 xyloglucan endotransglucosylase/hydrolase 32 xyloglucan
endotransglucosylase/hydrolase 32		 -0.71 0.32 -0.32
110 AT1G29660 GDSL-like Lipase/Acylhydrolase superfamily protein -0.71 0.3 -0.31
111 AT4G05180 photosystem II subunit Q-2 PHOTOSYSTEM II SUBUNIT Q,
photosystem II subunit Q-2, PSII-Q		 -0.71 0.32 -0.32
112 AT2G34920 RING/U-box superfamily protein embryo sac development arrest 18 -0.71 0.33 -0.3
113 AT1G49430 long-chain acyl-CoA synthetase 2 long-chain acyl-CoA synthetase 2,
LATERAL ROOT DEVELOPMENT 2		 -0.71 0.31 -0.33
114 AT1G04550 AUX/IAA transcriptional regulator family protein BODENLOS, indole-3-acetic acid
inducible 12		 -0.71 0.33 -0.32
115 AT1G20070 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED
DURING: 11 growth stages; Has 26 Blast hits to 26 proteins
in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 2; Plants - 24; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.71 0.32 -0.3
116 AT5G20885 RING/U-box superfamily protein -0.71 0.32 -0.34
117 AT5G17600 RING/U-box superfamily protein -0.71 0.31 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
118 C0067 Citramalic acid (S)-(+)-, (R)-(-)-Citramalate (S)-Citramalate; (R)-Citramalate - 0.86 0.44 -0.45 C0067
119 C0016 S-Adenosylmethionine S-Adenosyl-L-methionine S-Adenosyl-L-methionine ethylene biosynthesis I (plants),
scopoletin biosynthesis,
quercetinsulphates biosynthesis,
siroheme biosynthesis,
gibberellin inactivation II (methylation),
suberin biosynthesis,
volatile benzenoid biosynthesis I (ester formation),
S-adenosyl-L-methionine cycle II,
methylhalides biosynthesis (plants),
S-methylmethionine cycle,
ubiquinol-9 biosynthesis (eukaryotic),
nicotianamine biosynthesis,
methionine biosynthesis II,
spermine biosynthesis,
choline biosynthesis II,
diphthamide biosynthesis,
homogalacturonan biosynthesis,
phosphatidylcholine biosynthesis II,
methylquercetin biosynthesis,
plastoquinol biosynthesis,
chlorophyllide a biosynthesis I,
ferulate and sinapate biosynthesis,
ubiquinol-10 biosynthesis (eukaryotic),
phenylpropanoid biosynthesis,
free phenylpropanoid acid biosynthesis,
seleno-amino acid detoxification and volatilization I,
plant sterol biosynthesis,
lipoate biosynthesis and incorporation I,
methyl indole-3-acetate interconversion,
cyclopropane and cyclopropene fatty acid biosynthesis,
spermidine biosynthesis I,
thiamine biosynthesis II,
methionine salvage pathway,
spermidine hydroxycinnamic acid conjugates biosynthesis,
simple coumarins biosynthesis,
phosphatidylcholine biosynthesis IV,
glutathione-mediated detoxification II,
S-adenosyl-L-methionine biosynthesis,
methionine degradation I (to homocysteine),
phosphatidylcholine biosynthesis III,
phylloquinol biosynthesis,
choline biosynthesis I,
biotin biosynthesis II,
vitamin E biosynthesis 		-0.75 0.46 -0.47 C0016