AT2G43030 : -
Query Information
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AGICode AT2G43030
Description Ribosomal protein L3 family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G43030 Ribosomal protein L3 family protein 1 0.32 -0.31
2 AT5G08280 hydroxymethylbilane synthase hydroxymethylbilane synthase 0.96 0.32 -0.32
3 AT1G79850 ribosomal protein S17 CS17, PIGMENT DEFECTIVE 347,
PLASTID RIBOSOMAL SMALL SUBUNIT
PROTEIN 17, ribosomal protein S17		 0.96 0.34 -0.3
4 AT5G58250 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
thylakoid, chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 14 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF2488
(InterPro:IPR019616); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).		 EMBRYO DEFECTIVE 3143 0.95 0.31 -0.32
5 AT3G54210 Ribosomal protein L17 family protein 0.95 0.3 -0.29
6 AT5G65220 Ribosomal L29 family protein 0.95 0.31 -0.33
7 AT4G18480 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 CHLORINA 42, CHLORINA 42, CHL11,
CHLI-1, CHLI1		 0.95 0.3 -0.3
8 AT3G25920 ribosomal protein L15 ribosomal protein L15 0.95 0.29 -0.32
9 AT3G48730 glutamate-1-semialdehyde 2,1-aminomutase 2 glutamate-1-semialdehyde
2,1-aminomutase 2		 0.95 0.32 -0.33
10 AT2G40490 Uroporphyrinogen decarboxylase HEME2 0.95 0.33 -0.32
11 AT5G14320 Ribosomal protein S13/S18 family EMBRYO DEFECTIVE 3137 0.95 0.34 -0.32
12 AT2G33800 Ribosomal protein S5 family protein EMBRYO DEFECTIVE 3113 0.95 0.3 -0.35
13 AT1G64510 Translation elongation factor EF1B/ribosomal protein S6
family protein		 0.95 0.3 -0.3
14 AT2G33450 Ribosomal L28 family 0.94 0.31 -0.3
15 AT2G48070 resistance to phytophthora 1 RESISTANCE TO PHYTOPHTHORA 1 0.94 0.31 -0.33
16 AT3G12930 Lojap-related protein 0.94 0.33 -0.32
17 AT3G56910 plastid-specific 50S ribosomal protein 5 plastid-specific 50S ribosomal
protein 5		 0.94 0.31 -0.32
18 AT1G35680 Ribosomal protein L21 chloroplast ribosomal protein L21 0.94 0.32 -0.31
19 AT4G34620 small subunit ribosomal protein 16 small subunit ribosomal protein 16 0.94 0.31 -0.32
20 AT3G52150 RNA-binding (RRM/RBD/RNP motifs) family protein 0.94 0.32 -0.31
21 AT1G06190 Rho termination factor 0.93 0.34 -0.3
22 AT5G11480 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.93 0.32 -0.32
23 AT5G47190 Ribosomal protein L19 family protein 0.93 0.31 -0.32
24 AT5G45930 magnesium chelatase i2 CHL I2, CHLI-2, magnesium
chelatase i2		 0.93 0.32 -0.32
25 AT4G20360 RAB GTPase homolog E1B ATRAB8D, RAB GTPase homolog E1B,
RAB GTPase homolog E1B		 0.93 0.3 -0.32
26 AT1G07320 ribosomal protein L4 EMBRYO DEFECTIVE 2784, ribosomal
protein L4		 0.93 0.32 -0.29
27 AT3G15190 chloroplast 30S ribosomal protein S20, putative 0.93 0.32 -0.31
28 AT1G78630 Ribosomal protein L13 family protein embryo defective 1473 0.93 0.33 -0.31
29 AT1G48350 Ribosomal L18p/L5e family protein EMBRYO DEFECTIVE 3105 0.93 0.32 -0.29
30 AT1G75350 Ribosomal protein L31 embryo defective 2184 0.93 0.31 -0.3
31 AT3G13120 Ribosomal protein S10p/S20e family protein 0.93 0.31 -0.32
32 AT1G68590 Ribosomal protein PSRP-3/Ycf65 0.93 0.31 -0.31
33 AT4G37510 Ribonuclease III family protein 0.93 0.31 -0.3
34 AT5G63050 embryo defective 2759 embryo defective 2759 0.93 0.3 -0.32
35 AT1G02150 Tetratricopeptide repeat (TPR)-like superfamily protein 0.93 0.31 -0.3
36 AT2G35500 shikimate kinase like 2 shikimate kinase-like 2 0.92 0.3 -0.32
37 AT5G51110 Transcriptional coactivator/pterin dehydratase 0.92 0.32 -0.29
38 AT5G13510 Ribosomal protein L10 family protein EMBRYO DEFECTIVE 3136 0.92 0.32 -0.31
39 AT1G50900 Ankyrin repeat family protein Grana Deficient Chloroplast 1,
LHCP translocation defect		 0.92 0.32 -0.32
40 AT1G08540 RNApolymerase sigma subunit 2 ABC1, SIGMA FACTOR 1, SIGMA FACTOR
2, RNA POLYMERASE SIGMA SUBUNIT 1,
RNApolymerase sigma subunit 2,
SIGA, SIGMA FACTOR B		 0.92 0.33 -0.33
41 AT4G26370 antitermination NusB domain-containing protein 0.92 0.33 -0.3
42 AT4G11175 Nucleic acid-binding, OB-fold-like protein 0.92 0.32 -0.34
43 AT5G14660 peptide deformylase 1B ATDEF2, DEF2, peptide deformylase
1B		 0.92 0.34 -0.3
44 AT3G09210 plastid transcriptionally active 13 plastid transcriptionally active
13		 0.92 0.32 -0.3
45 AT2G38140 plastid-specific ribosomal protein 4 plastid-specific ribosomal protein
4		 0.92 0.32 -0.32
46 AT1G05190 Ribosomal protein L6 family embryo defective 2394 0.92 0.32 -0.32
47 AT5G54600 Translation protein SH3-like family protein 0.92 0.34 -0.31
48 AT1G67740 photosystem II BY photosystem II BY, YCF32 0.92 0.32 -0.32
49 AT5G14910 Heavy metal transport/detoxification superfamily protein 0.91 0.33 -0.29
50 AT2G41950 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, plant-type cell wall; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 53
Blast hits to 53 proteins in 24 species: Archae - 0;
Bacteria - 27; Metazoa - 0; Fungi - 0; Plants - 26; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.91 0.31 -0.32
51 AT5G11450 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP
family protein		 PsbP domain protein 5 0.91 0.32 -0.32
52 AT5G30510 ribosomal protein S1 ARRPS1, ribosomal protein S1 0.91 0.31 -0.32
53 AT2G20890 photosystem II reaction center PSB29 protein photosystem II reaction center
PSB29 protein, THYLAKOID
FORMATION1		 0.91 0.33 -0.29
54 AT3G04260 plastid transcriptionally active 3 PIGMENT DEFECTIVE 324, plastid
transcriptionally active 3		 0.91 0.31 -0.34
55 AT4G17560 Ribosomal protein L19 family protein 0.91 0.33 -0.31
56 AT1G53520 Chalcone-flavanone isomerase family protein 0.91 0.33 -0.31
57 AT5G55220 trigger factor type chaperone family protein 0.91 0.33 -0.33
58 AT2G33180 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast stroma; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 57 Blast hits to 57
proteins in 22 species: Archae - 0; Bacteria - 8; Metazoa -
0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes -
14 (source: NCBI BLink).		 0.91 0.3 -0.34
59 AT2G37220 RNA-binding (RRM/RBD/RNP motifs) family protein 0.91 0.32 -0.31
60 AT3G63410 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 ALBINO OR PALE GREEN MUTANT 1,
E37, INNER ENVELOPE PROTEIN 37,
VITAMIN E DEFECTIVE 3		 0.91 0.31 -0.3
61 AT3G44890 ribosomal protein L9 ribosomal protein L9 0.91 0.34 -0.31
62 AT5G52960 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF3143 (InterPro:IPR021489);
Has 1807 Blast hits to 1807 proteins in 277 species: Archae
- 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants -
385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI
BLink).		 0.9 0.34 -0.31
63 AT3G04790 Ribose 5-phosphate isomerase, type A protein EMBRYO DEFECTIVE 3119 0.9 0.31 -0.32
64 AT4G34290 SWIB/MDM2 domain superfamily protein 0.9 0.36 -0.33
65 AT4G17600 Chlorophyll A-B binding family protein LIL3:1 0.9 0.3 -0.31
66 AT3G28460 methyltransferases 0.9 0.31 -0.31
67 AT5G59500 protein C-terminal S-isoprenylcysteine carboxyl
O-methyltransferases		 0.9 0.3 -0.31
68 AT4G09650 ATP synthase delta-subunit gene ATP synthase delta-subunit gene,
PIGMENT DEFECTIVE 332		 0.9 0.32 -0.31
69 AT1G55490 chaperonin 60 beta chaperonin 60 beta,
chaperonin-60beta1, LESION
INITIATION 1		 0.9 0.32 -0.31
70 AT3G23700 Nucleic acid-binding proteins superfamily 0.9 0.3 -0.29
71 AT3G05600 alpha/beta-Hydrolases superfamily protein 0.9 0.31 -0.31
72 AT2G24060 Translation initiation factor 3 protein 0.9 0.34 -0.29
73 AT1G14270 CAAX amino terminal protease family protein 0.9 0.33 -0.3
74 AT2G24090 Ribosomal protein L35 0.9 0.33 -0.29
75 AT2G21860 violaxanthin de-epoxidase-related 0.9 0.33 -0.3
76 AT5G52970 thylakoid lumen 15.0 kDa protein 0.9 0.3 -0.31
77 AT5G19620 outer envelope protein of 80 kDa ARABIDOPSIS THALIANA OUTER
ENVELOPE PROTEIN OF 80 KDA, EMBRYO
DEFECTIVE 213, outer envelope
protein of 80 kDa, translocon at
the outer envelope membrane of
chloroplasts 75-V		 0.9 0.29 -0.3
78 AT4G01310 Ribosomal L5P family protein 0.89 0.33 -0.32
79 AT2G40690 NAD-dependent glycerol-3-phosphate dehydrogenase family
protein		 GLY1, SUPPRESSOR OF FATTY ACID
DESATURASE DEFICIENCY 1		 0.89 0.34 -0.29
80 AT1G32990 plastid ribosomal protein l11 plastid ribosomal protein l11 0.89 0.31 -0.31
81 AT2G03420 unknown protein; Has 38 Blast hits to 38 proteins in 17
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.89 0.31 -0.31
82 AT5G63570 glutamate-1-semialdehyde-2,1-aminomutase glutamate-1-semialdehyde-2,1-amino
mutase		 0.89 0.35 -0.3
83 AT4G38970 fructose-bisphosphate aldolase 2 fructose-bisphosphate aldolase 2 0.89 0.31 -0.34
84 AT3G55250 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, chloroplast, nucleus; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 46
Blast hits to 46 proteins in 17 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 PIGMENT DEFECTIVE 329 0.89 0.32 -0.31
85 AT2G39670 Radical SAM superfamily protein 0.89 0.32 -0.34
86 AT1G44575 Chlorophyll A-B binding family protein CP22, NONPHOTOCHEMICAL QUENCHING
4, PHOTOSYSTEM II SUBUNIT S		 0.89 0.32 -0.32
87 AT4G30580 Phospholipid/glycerol acyltransferase family protein ATS2, EMBRYO DEFECTIVE 1995,
lysophosphatidic acid
acyltransferase 1		 0.89 0.31 -0.29
88 AT2G33430 differentiation and greening-like 1 DIFFERENTIATION AND GREENING-LIKE,
differentiation and greening-like
1		 0.89 0.31 -0.32
89 AT1G75690 DnaJ/Hsp40 cysteine-rich domain superfamily protein LOW QUANTUM YIELD OF PHOTOSYSTEM
II 1		 0.89 0.34 -0.32
90 AT4G14890 2Fe-2S ferredoxin-like superfamily protein ferredoxin C 2 0.89 0.3 -0.32
91 AT1G01970 Tetratricopeptide repeat (TPR)-like superfamily protein 0.89 0.31 -0.32
92 AT1G02280 translocon at the outer envelope membrane of chloroplasts
33		 ATTOC33, PLASTID PROTEIN IMPORT 1,
translocon at the outer envelope
membrane of chloroplasts 33		 0.89 0.32 -0.34
93 AT1G60230 Radical SAM superfamily protein 0.89 0.33 -0.33
94 AT5G22340 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 58 Blast hits to 58 proteins
in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 57; Viruses - 0; Other Eukaryotes - 1
(source: NCBI BLink).		 0.89 0.32 -0.3
95 AT4G16390 pentatricopeptide (PPR) repeat-containing protein suppressor of variegation 7 0.89 0.31 -0.3
96 AT4G01050 thylakoid rhodanese-like thylakoid rhodanese-like 0.89 0.31 -0.32
97 AT4G24770 31-kDa RNA binding protein ARABIDOPSIS THALIANA RNA BINDING
PROTEIN, APPROXIMATELY 31 KD,
ATRBP33, CP31, 31-kDa RNA binding
protein		 0.89 0.29 -0.33
98 AT1G14345 NAD(P)-linked oxidoreductase superfamily protein 0.89 0.33 -0.33
99 AT5G11270 overexpressor of cationic peroxidase 3 overexpressor of cationic
peroxidase 3		 0.89 0.3 -0.31
100 AT1G51570 Calcium-dependent lipid-binding (CaLB domain) plant
phosphoribosyltransferase family protein		 0.89 0.32 -0.31
101 AT3G25480 Rhodanese/Cell cycle control phosphatase superfamily
protein		 0.89 0.31 -0.33
102 AT2G18710 SECY homolog 1 SECY homolog 1 0.89 0.32 -0.3
103 AT4G31850 proton gradient regulation 3 proton gradient regulation 3 0.89 0.3 -0.32
104 AT5G46580 pentatricopeptide (PPR) repeat-containing protein 0.89 0.31 -0.3
105 AT2G47450 chloroplast signal recognition particle component (CAO) CHAOS, CHLOROPLAST SIGNAL
RECOGNITION PARTICLE 43		 0.88 0.34 -0.33
106 AT2G45270 glycoprotease 1 glycoprotease 1 0.88 0.31 -0.35
107 AT4G25050 acyl carrier protein 4 acyl carrier protein 4 0.88 0.31 -0.31
108 AT3G08740 elongation factor P (EF-P) family protein 0.88 0.3 -0.31
109 AT2G36990 RNApolymerase sigma-subunit F SIGMA FACTOR 6, SIGMA FACTOR 6,
RNApolymerase sigma-subunit F,
SOLDAT8		 0.88 0.32 -0.32
110 AT2G44640 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: mitochondrion,
chloroplast, plasma membrane, plastid, chloroplast
envelope; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF3769 (InterPro:IPR022244);
BEST Arabidopsis thaliana protein match is: pigment
defective 320 (TAIR:AT3G06960.1); Has 49 Blast hits to 48
proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes -
1 (source: NCBI BLink).		 0.88 0.34 -0.32
111 AT4G02770 photosystem I subunit D-1 photosystem I subunit D-1 0.88 0.3 -0.33
112 AT1G22700 Tetratricopeptide repeat (TPR)-like superfamily protein 0.88 0.31 -0.33
113 AT4G20130 plastid transcriptionally active 14 plastid transcriptionally active
14		 0.88 0.33 -0.3
114 AT3G17170 Translation elongation factor EF1B/ribosomal protein S6
family protein		 REGULATOR OF FATTY-ACID
COMPOSITION 3		 0.88 0.31 -0.33
115 AT1G33040 nascent polypeptide-associated complex subunit alpha-like
protein 5		 nascent polypeptide-associated
complex subunit alpha-like protein
5		 0.88 0.31 -0.32
116 AT3G60370 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.88 0.31 -0.31
117 AT3G14930 Uroporphyrinogen decarboxylase HEME1 0.88 0.33 -0.32
118 AT5G44650 Encodes a chloroplast protein that induces tolerance to
multiple environmental stresses and reduces photooxidative
damage.		 Arabidopsis thaliana chloroplast
protein-enhancing stress
tolerance, chloroplast
protein-enhancing stress
tolerance, Ycf3-interacting
protein 1		 0.88 0.31 -0.3
119 AT1G10960 ferredoxin 1 ferredoxin 1, ferredoxin 1 0.88 0.32 -0.31
120 AT5G53490 Tetratricopeptide repeat (TPR)-like superfamily protein 0.88 0.31 -0.32
121 AT2G06520 photosystem II subunit X photosystem II subunit X 0.88 0.32 -0.3
122 AT1G29070 Ribosomal protein L34 0.88 0.3 -0.3
123 AT2G14880 SWIB/MDM2 domain superfamily protein 0.88 0.32 -0.33
124 AT5G38290 Peptidyl-tRNA hydrolase family protein 0.88 0.32 -0.31
125 AT5G46420 16S rRNA processing protein RimM family 0.88 0.34 -0.32
126 AT4G18360 Aldolase-type TIM barrel family protein -0.83 0.3 -0.32
127 AT2G41380 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.81 0.32 -0.31
128 AT5G06750 Protein phosphatase 2C family protein -0.81 0.33 -0.32
129 AT3G25290 Auxin-responsive family protein -0.81 0.31 -0.31
130 AT5G63970 Copine (Calcium-dependent phospholipid-binding protein)
family		 -0.8 0.29 -0.33
131 AT5G49880 mitotic checkpoint family protein -0.8 0.31 -0.33
132 AT2G41220 glutamate synthase 2 glutamate synthase 2 -0.8 0.29 -0.31
133 AT1G14240 GDA1/CD39 nucleoside phosphatase family protein -0.79 0.32 -0.33
134 AT1G35260 MLP-like protein 165 MLP-like protein 165 -0.79 0.31 -0.35
135 AT1G76790 O-methyltransferase family protein indole glucosinolate
O-methyltransferase 5		 -0.79 0.32 -0.29
136 AT5G18270 Arabidopsis NAC domain containing protein 87 Arabidopsis NAC domain containing
protein 87		 -0.78 0.3 -0.29
137 AT2G28110 Exostosin family protein FRAGILE FIBER 8, IRREGULAR XYLEM 7 -0.78 0.31 -0.32
138 AT3G25610 ATPase E1-E2 type family protein / haloacid
dehalogenase-like hydrolase family protein		 -0.78 0.32 -0.31
139 AT2G39350 ABC-2 type transporter family protein ATP-binding cassette G1 -0.77 0.31 -0.33
140 AT5G18780 F-box/RNI-like superfamily protein -0.77 0.33 -0.33
141 AT3G12760 CONTAINS InterPro DOMAIN/s: Defective-in-cullin neddylation
protein (InterPro:IPR014764), Protein of unknown function
DUF298 (InterPro:IPR005176), UBA-like (InterPro:IPR009060);
BEST Arabidopsis thaliana protein match is: Domain of
unknown function (DUF298) (TAIR:AT1G15860.2); Has 857 Blast
hits to 855 proteins in 202 species: Archae - 0; Bacteria -
0; Metazoa - 482; Fungi - 154; Plants - 139; Viruses - 0;
Other Eukaryotes - 82 (source: NCBI BLink).		 -0.75 0.3 -0.32
142 AT1G13340 Regulator of Vps4 activity in the MVB pathway protein -0.75 0.32 -0.34
143 AT2G26300 G protein alpha subunit 1 ARABIDOPSIS THALIANA G PROTEIN
ALPHA SUBUNIT 1, G protein alpha
subunit 1, G PROTEIN ALPHA SUBUNIT
1		 -0.75 0.33 -0.32
144 AT2G46150 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.75 0.3 -0.31
145 AT3G57380 Glycosyltransferase family 61 protein -0.75 0.34 -0.33
146 AT1G26730 EXS (ERD1/XPR1/SYG1) family protein -0.74 0.32 -0.31
147 AT5G24090 chitinase A chitinase A, chitinase A -0.74 0.31 -0.32
148 AT3G53480 pleiotropic drug resistance 9 ATP-binding cassette G37,
PLEIOTROPIC DRUG RESISTANCE 9,
pleiotropic drug resistance 9,
polar auxin transport inhibitor
sensitive 1		 -0.74 0.31 -0.34
149 AT5G37540 Eukaryotic aspartyl protease family protein -0.73 0.33 -0.34
150 AT3G54950 patatin-like protein 6 patatin-like protein 6,
PATATIN-LIKE PROTEIN 7,
patatin-related phospholipase
IIIbeta		 -0.72 0.3 -0.32
151 AT1G22800 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.71 0.31 -0.3
152 AT5G38030 MATE efflux family protein -0.71 0.31 -0.31
153 AT2G40110 Yippee family putative zinc-binding protein -0.71 0.3 -0.34
154 AT1G26440 ureide permease 5 ureide permease 5, UPS5, ureide
permease 5		 -0.7 0.3 -0.31
155 AT5G65660 hydroxyproline-rich glycoprotein family protein -0.7 0.33 -0.3
156 AT1G05577 Domain of unknown function (DUF966) -0.7 0.32 -0.3