AT2G42940 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT2G42940
Description Predicted AT-hook DNA-binding family protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G42940 Predicted AT-hook DNA-binding family protein 1 0.32 -0.34
2 AT3G33064 transposable element gene 0.72 0.31 -0.32
3 AT2G28180 Cation/hydrogen exchanger family protein ATCHX8, CHX08, CATION/H+ EXCHANGER
8		 0.68 0.32 -0.33
4 AT2G18915 LOV KELCH protein 2 ADAGIO 2, LOV KELCH protein 2 0.67 0.32 -0.34
5 AT1G66930 Protein kinase superfamily protein -0.66 0.31 -0.32
6 AT5G61920 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures;
EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal
differentiation and expansion stage, E expanded cotyledon
stage, D bilateral stage; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G67170.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.66 0.31 -0.3
7 AT5G37380 Chaperone DnaJ-domain superfamily protein 0.65 0.3 -0.31
8 AT4G19570 Chaperone DnaJ-domain superfamily protein -0.65 0.32 -0.3
9 AT3G03580 Tetratricopeptide repeat (TPR)-like superfamily protein 0.64 0.3 -0.31
10 AT3G23750 Leucine-rich repeat protein kinase family protein 0.64 0.3 -0.32
11 AT3G42360 transposable element gene 0.63 0.33 -0.3
12 AT5G49380 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF625 (InterPro:IPR006887); BEST Arabidopsis thaliana
protein match is: binding (TAIR:AT3G06670.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.62 0.3 -0.35
13 AT3G42320 transposable element gene -0.61 0.33 -0.3
14 ATCG00170 DNA-directed RNA polymerase family protein RPOC2 0.6 0.31 -0.33
15 AT2G26490 Transducin/WD40 repeat-like superfamily protein 0.6 0.31 -0.31
16 AT5G27160 transposable element gene 0.6 0.34 -0.31
17 AT4G09080 Outer membrane OMP85 family protein TRANSLOCON OUTER MEMBRANE COMPLEX
75-IV, translocon at the outer
envelope membrane of chloroplasts
75-IV		 0.6 0.31 -0.28
18 ATCG00490 ribulose-bisphosphate carboxylases RBCL 0.6 0.32 -0.32
19 AT5G49110 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN:
cultured cell; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.6 0.31 -0.29
20 ATMG01240 hypothetical protein ORF100C 0.6 0.33 -0.31
21 AT3G24330 O-Glycosyl hydrolases family 17 protein -0.59 0.3 -0.31
22 AT3G19050 phragmoplast orienting kinesin 2 phragmoplast orienting kinesin 2 -0.58 0.32 -0.35
23 AT3G02630 Plant stearoyl-acyl-carrier-protein desaturase family
protein		 0.58 0.28 -0.33
24 AT2G39320 Cysteine proteinases superfamily protein -0.58 0.29 -0.33
25 AT5G65180 ENTH/VHS family protein 0.58 0.31 -0.3
26 AT2G24370 Protein kinase protein with adenine nucleotide alpha
hydrolases-like domain		 -0.58 0.3 -0.32
27 AT3G42980 transposable element gene 0.58 0.31 -0.32
28 AT4G19850 lectin-related ARABIDOPSIS THALIANA PHLOEM
PROTEIN 2-A2, phloem protein 2-A2,
PP2A2		 0.58 0.32 -0.33
29 AT1G01450 Protein kinase superfamily protein -0.58 0.32 -0.32
30 AT5G38580 FBD-like domain family protein -0.57 0.29 -0.29
31 AT1G24060 unknown protein; Has 7 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.57 0.31 -0.33
32 AT5G24440 CTC-interacting domain 13 CTC-interacting domain 13 -0.57 0.33 -0.32
33 AT1G33680 KH domain-containing protein 0.56 0.32 -0.3
34 AT5G46400 Tetratricopeptide repeat (TPR)-like superfamily protein AT PRP39-2, PRP39-2 -0.56 0.3 -0.29
35 AT1G74870 RING/U-box superfamily protein 0.56 0.29 -0.29
36 AT5G18360 Disease resistance protein (TIR-NBS-LRR class) family -0.56 0.31 -0.33
37 AT3G07610 Transcription factor jumonji (jmjC) domain-containing
protein		 increase in bonsai methylation 1 0.56 0.31 -0.33
38 AT5G60110 pumilio 18 pumilio 18, pumilio 18 0.56 0.31 -0.31
39 ATCG00500 acetyl-CoA carboxylase carboxyl transferase subunit beta acetyl-CoA carboxylase carboxyl
transferase subunit beta		 0.56 0.31 -0.32
40 AT4G28900 transposable element gene -0.56 0.32 -0.32
41 AT2G32750 Exostosin family protein 0.56 0.28 -0.31
42 AT1G02740 MRG family protein 0.55 0.31 -0.33
43 AT4G15755 Calcium-dependent lipid-binding (CaLB domain) family
protein		 -0.55 0.3 -0.3
44 AT5G46295 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G06475.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.55 0.33 -0.32
45 AT2G27940 RING/U-box superfamily protein -0.55 0.29 -0.33
46 AT5G61250 glucuronidase 1 glucuronidase 1, glucuronidase 1 -0.55 0.33 -0.29
47 AT4G20250 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.55 0.34 -0.33
48 AT5G24880 BEST Arabidopsis thaliana protein match is:
calmodulin-binding protein-related (TAIR:AT5G10660.1); Has
1807 Blast hits to 1807 proteins in 277 species: Archae -
0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.55 0.29 -0.34
49 AT3G42770 F-box/RNI-like/FBD-like domains-containing protein 0.55 0.31 -0.3
50 AT3G17280 F-box and associated interaction domains-containing protein -0.54 0.31 -0.32
51 AT2G42040 CONTAINS InterPro DOMAIN/s: WRC (InterPro:IPR014977); Has
219 Blast hits to 219 proteins in 19 species: Archae - 0;
Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 215; Viruses
- 0; Other Eukaryotes - 1 (source: NCBI BLink).		 -0.54 0.32 -0.31
52 AT2G47050 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.54 0.32 -0.31
53 AT2G16610 transposable element gene -0.54 0.32 -0.32
54 AT5G63390 O-fucosyltransferase family protein -0.54 0.32 -0.32
55 AT3G30640 transposable element gene -0.53 0.29 -0.29
56 AT4G19670 RING/U-box superfamily protein -0.53 0.33 -0.32
57 AT5G06650 C2H2 and C2HC zinc fingers superfamily protein GLABROUS INFLORESCENCE STEMS 2 0.53 0.31 -0.31
58 AT5G27870 Plant invertase/pectin methylesterase inhibitor superfamily -0.53 0.32 -0.3
59 AT3G23650 protein kinase-related -0.53 0.33 -0.32
60 AT1G43840 transposable element gene 0.53 0.31 -0.29
61 AT2G24830 zinc finger (CCCH-type) family protein / D111/G-patch
domain-containing protein		 -0.53 0.32 -0.32
62 AT1G17310 MADS-box transcription factor family protein 0.52 0.32 -0.32
63 AT5G56160 Sec14p-like phosphatidylinositol transfer family protein -0.52 0.29 -0.3
64 AT5G33340 Eukaryotic aspartyl protease family protein CONSTITUTIVE DISEASE RESISTANCE 1 0.52 0.33 -0.3
65 AT2G40530 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: leaf apex, inflorescence
meristem, petal, flower; EXPRESSED DURING: 4 anthesis,
petal differentiation and expansion stage; Has 5 Blast hits
to 5 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.52 0.34 -0.31
66 AT3G42830 RING/U-box superfamily protein -0.52 0.29 -0.31
67 AT1G29710 Tetratricopeptide repeat (TPR)-like superfamily protein 0.52 0.29 -0.32
68 AT4G11770 Galactose oxidase/kelch repeat superfamily protein -0.52 0.34 -0.33
69 AT2G07520 transposable element gene 0.52 0.3 -0.33
70 AT2G11110 transposable element gene -0.51 0.29 -0.32
71 AT1G15830 unknown protein; Has 165982 Blast hits to 57214 proteins in
2459 species: Archae - 263; Bacteria - 44622; Metazoa -
55751; Fungi - 10656; Plants - 17613; Viruses - 2527; Other
Eukaryotes - 34550 (source: NCBI BLink).		 -0.51 0.31 -0.3
72 AT5G46150 LEM3 (ligand-effect modulator 3) family protein / CDC50
family protein		 -0.51 0.3 -0.33
73 AT2G04063 glycine-rich protein 0.51 0.32 -0.31
74 AT4G39490 cytochrome P450, family 96, subfamily A, polypeptide 10 cytochrome P450, family 96,
subfamily A, polypeptide 10		 -0.51 0.31 -0.31
75 AT4G35280 C2H2-like zinc finger protein DUO1-ACTIVATED ZINC FINGER 2 -0.51 0.31 -0.3
76 AT4G14610 pseudogene, disease resistance protein (CC-NBS-LRR class),
putative, domain signature CC-NBS-LRR exists, suggestive of
a disease resistance protein.; blastp match of 45% identity
and 2.2e-162 P-value to
GP|24461866|gb|AAN62353.1|AF506028_20|AF506028 NBS-LRR type
disease resistance protein {Poncirus trifoliata}		 -0.51 0.31 -0.31
77 AT5G03000 Galactose oxidase/kelch repeat superfamily protein -0.5 0.3 -0.32
78 AT5G57140 purple acid phosphatase 28 PURPLE ACID PHOSPHATASE 28, purple
acid phosphatase 28		 -0.5 0.29 -0.3
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
79 C0173 MST_2301.7 - - - 0.69 0.42 -0.46
80 C0213 PR_MST_2410.2 - - - 0.67 0.45 -0.42
81 C0108 GMP - GMP guanine and guanosine salvage II,
guanosine nucleotides degradation I,
guanosine nucleotides degradation II,
guanine and guanosine salvage III,
purine nucleotides de novo biosynthesis II,
purine nucleotide metabolism (phosphotransfer and nucleotide modification) 		-0.61 0.47 -0.46 C0108
82 C0058 Arginine D,L-Arginine L-Arginine arginine degradation VI (arginase 2 pathway),
arginine degradation I (arginase pathway),
arginine biosynthesis I,
putrescine biosynthesis II,
nitric oxide biosynthesis I (in plants),
citrulline biosynthesis,
putrescine biosynthesis I,
tRNA charging,
arginine biosynthesis II (acetyl cycle),
citrulline-nitric oxide cycle,
urea cycle,
L-Ndelta-acetylornithine biosynthesis 		-0.59 0.32 -0.33 C0058
83 C0069 Citrulline - Citrulline citrulline-nitric oxide cycle,
citrulline biosynthesis,
nitric oxide biosynthesis I (in plants),
urea cycle,
citrulline degradation,
arginine biosynthesis II (acetyl cycle),
arginine biosynthesis I 		-0.52 0.33 -0.32 C0069