AT2G28410 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT2G28410
Description unknown protein; Has 18 Blast hits to 18 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G28410 unknown protein; Has 18 Blast hits to 18 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 1 0.33 -0.32
2 AT5G44680 DNA glycosylase superfamily protein 0.88 0.3 -0.31
3 AT5G01090 Concanavalin A-like lectin family protein 0.85 0.32 -0.32
4 AT5G58730 pfkB-like carbohydrate kinase family protein -0.84 0.32 -0.31
5 AT3G29030 expansin A5 ARABIDOPSIS THALIANA EXPANSIN 5,
ARABIDOPSIS THALIANA EXPANSIN A5,
ATHEXP ALPHA 1.4, EXPANSIN 5,
expansin A5		 0.83 0.34 -0.31
6 AT1G31335 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 20 plant structures; EXPRESSED
DURING: 13 growth stages; Has 34 Blast hits to 34 proteins
in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.82 0.31 -0.34
7 AT4G28780 GDSL-like Lipase/Acylhydrolase superfamily protein 0.82 0.29 -0.32
8 AT5G44400 FAD-binding Berberine family protein 0.81 0.31 -0.31
9 AT5G66800 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G50640.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.8 0.31 -0.32
10 AT5G13010 RNA helicase family protein embryo defective 3011 -0.8 0.3 -0.31
11 AT1G07880 Protein kinase superfamily protein ATMPK13 0.8 0.31 -0.3
12 AT4G12980 Auxin-responsive family protein 0.8 0.3 -0.3
13 AT5G03170 FASCICLIN-like arabinogalactan-protein 11 ARABIDOPSIS FASCICLIN-LIKE
ARABINOGALACTAN-PROTEIN 11,
FASCICLIN-like
arabinogalactan-protein 11		 0.8 0.3 -0.3
14 AT3G49210 O-acyltransferase (WSD1-like) family protein -0.8 0.29 -0.31
15 AT2G35470 unknown protein; Has 25 Blast hits to 25 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.79 0.32 -0.32
16 AT5G60880 breaking of asymmetry in the stomatal lineage BREAKING OF ASYMMETRY IN THE
STOMATAL LINEAGE		 0.79 0.3 -0.33
17 AT5G01370 ALC-interacting protein 1 ALC-interacting protein 1 0.79 0.33 -0.32
18 AT5G08330 TCP family transcription factor AtTCP11, TCP domain protein 11 0.79 0.34 -0.32
19 AT5G26330 Cupredoxin superfamily protein 0.78 0.33 -0.31
20 AT3G55420 unknown protein; Has 21 Blast hits to 21 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.78 0.29 -0.31
21 AT4G39270 Leucine-rich repeat protein kinase family protein -0.78 0.29 -0.3
22 AT1G74710 ADC synthase superfamily protein ARABIDOPSIS ISOCHORISMATE SYNTHASE
1, ENHANCED DISEASE SUSCEPTIBILITY
TO ERYSIPHE ORONTII 16,
ISOCHORISMATE SYNTHASE 1,
SALICYLIC ACID INDUCTION DEFICIENT
2		 0.78 0.34 -0.3
23 AT5G42870 phosphatidic acid phosphohydrolase 2 PHOSPHATIDIC ACID PHOSPHOHYDROLASE
2, phosphatidic acid
phosphohydrolase 2		 -0.77 0.33 -0.34
24 AT4G31805 WRKY family transcription factor 0.77 0.32 -0.32
25 AT5G07580 Integrase-type DNA-binding superfamily protein 0.77 0.31 -0.32
26 AT4G28980 CDK-activating kinase 1AT CDK-activating kinase 1AT,
CYCLIN-DEPENDENT KINASE F;1		 0.76 0.29 -0.31
27 AT3G22070 proline-rich family protein 0.75 0.33 -0.29
28 AT3G50890 homeobox protein 28 homeobox protein 28, homeobox
protein 28, ZINC FINGER
HOMEODOMAIN 7		 0.75 0.31 -0.32
29 AT5G50740 Heavy metal transport/detoxification superfamily protein 0.75 0.31 -0.3
30 AT3G05360 receptor like protein 30 receptor like protein 30, receptor
like protein 30		 -0.75 0.33 -0.31
31 AT1G61170 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 19 plant
structures; EXPRESSED DURING: 12 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G11125.1); Has 54 Blast hits to 54 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 17; Fungi - 0;
Plants - 34; Viruses - 1; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.75 0.32 -0.3
32 AT2G39110 Protein kinase superfamily protein -0.75 0.3 -0.31
33 AT3G42725 Putative membrane lipoprotein 0.75 0.33 -0.3
34 AT2G16790 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.75 0.34 -0.3
35 AT1G31690 Copper amine oxidase family protein 0.75 0.31 -0.32
36 AT2G14120 dynamin related protein dynamin related protein -0.75 0.32 -0.32
37 AT1G77380 amino acid permease 3 amino acid permease 3, ATAAP3 -0.74 0.32 -0.29
38 AT2G41850 polygalacturonase abscission zone A. thaliana ARABIDOPSIS DEHISCENCE ZONE
POLYGALACTURONASE 2,
polygalacturonase abscission zone
A. thaliana		 -0.74 0.33 -0.31
39 AT1G68585 unknown protein; Has 23 Blast hits to 23 proteins in 6
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.74 0.3 -0.32
40 AT5G23400 Leucine-rich repeat (LRR) family protein 0.74 0.31 -0.31
41 AT5G02560 histone H2A 12 histone H2A 12 0.74 0.3 -0.32
42 AT2G25730 unknown protein; Has 157 Blast hits to 144 proteins in 62
species: Archae - 0; Bacteria - 0; Metazoa - 101; Fungi -
0; Plants - 35; Viruses - 0; Other Eukaryotes - 21 (source:
NCBI BLink).		 -0.74 0.31 -0.32
43 AT1G74250 DNAJ heat shock N-terminal domain-containing protein -0.74 0.31 -0.31
44 AT1G78020 Protein of unknown function (DUF581) 0.74 0.3 -0.3
45 AT1G20090 RHO-related protein from plants 2 Arabidopsis RAC-like 4, ATRAC4,
ATROP2, RHO-related protein from
plants 2		 0.74 0.33 -0.33
46 AT3G62160 HXXXD-type acyl-transferase family protein 0.73 0.3 -0.33
47 AT1G73530 RNA-binding (RRM/RBD/RNP motifs) family protein 0.73 0.32 -0.3
48 AT5G04490 vitamin E pathway gene 5 vitamin E pathway gene 5 0.73 0.33 -0.3
49 AT3G52900 Family of unknown function (DUF662) 0.73 0.31 -0.35
50 AT5G24600 Protein of unknown function, DUF599 -0.73 0.32 -0.32
51 AT5G48120 ARM repeat superfamily protein -0.73 0.3 -0.34
52 AT3G14610 cytochrome P450, family 72, subfamily A, polypeptide 7 cytochrome P450, family 72,
subfamily A, polypeptide 7		 -0.73 0.29 -0.32
53 AT2G24260 LJRHL1-like 1 LJRHL1-like 1 -0.73 0.31 -0.3
54 AT5G67270 end binding protein 1C MICROTUBULE END BINDING PROTEIN 1,
ATEB1-HOMOLOG1, end binding
protein 1C		 0.73 0.29 -0.33
55 AT5G16250 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G02640.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.73 0.31 -0.31
56 AT5G03050 unknown protein; Has 33 Blast hits to 33 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.73 0.31 -0.31
57 AT1G80520 Sterile alpha motif (SAM) domain-containing protein 0.72 0.3 -0.33
58 AT4G13780 methionine--tRNA ligase, putative / methionyl-tRNA
synthetase, putative / MetRS, putative		 -0.72 0.3 -0.31
59 AT5G67230 Nucleotide-diphospho-sugar transferases superfamily protein IRREGULAR XYLEM 14 Homolog,
IRREGULAR XYLEM 14-LIKE		 0.72 0.33 -0.32
60 AT1G05380 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger protein		 -0.72 0.33 -0.3
61 AT5G19250 Glycoprotein membrane precursor GPI-anchored 0.72 0.31 -0.33
62 AT1G31580 ECS1 CXC750, ECS1 0.72 0.34 -0.3
63 AT5G04460 RING/U-box superfamily protein -0.72 0.33 -0.33
64 AT1G31690 Copper amine oxidase family protein 0.72 0.32 -0.31
65 AT1G19960 BEST Arabidopsis thaliana protein match is: transmembrane
receptors (TAIR:AT2G32140.1); Has 41 Blast hits to 41
proteins in 17 species: Archae - 0; Bacteria - 2; Metazoa -
23; Fungi - 0; Plants - 11; Viruses - 0; Other Eukaryotes -
5 (source: NCBI BLink).		 0.71 0.32 -0.32
66 AT1G20640 Plant regulator RWP-RK family protein 0.71 0.34 -0.32
67 AT1G04110 Subtilase family protein STOMATAL DENSITY AND DISTRIBUTION 0.71 0.33 -0.33
68 AT5G45850 Protein of unknown function (DUF688) 0.71 0.3 -0.32
69 AT2G44740 cyclin p4;1 cyclin p4;1 0.71 0.32 -0.36
70 AT2G41090 Calcium-binding EF-hand family protein 0.71 0.32 -0.35
71 AT3G57160 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.71 0.32 -0.32
72 AT3G56730 Putative endonuclease or glycosyl hydrolase 0.71 0.34 -0.33
73 AT1G07260 UDP-glucosyl transferase 71C3 UDP-glucosyl transferase 71C3 -0.7 0.29 -0.31
74 AT2G27150 abscisic aldehyde oxidase 3 abscisic aldehyde oxidase 3,
Aldehyde oxidase delta,
Arabidopsis thaliana aldehyde
oxidase 3, AtAAO3		 -0.7 0.32 -0.3
75 AT5G24030 SLAC1 homologue 3 SLAC1 homologue 3 -0.7 0.32 -0.31
76 AT1G69310 WRKY DNA-binding protein 57 ATWRKY57, WRKY DNA-binding protein
57		 -0.7 0.32 -0.31
77 AT1G23230 CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23
(InterPro:IPR021629); Has 187 Blast hits to 184 proteins in
67 species: Archae - 0; Bacteria - 0; Metazoa - 135; Fungi
- 0; Plants - 43; Viruses - 0; Other Eukaryotes - 9
(source: NCBI BLink).		 -0.7 0.3 -0.29
78 AT3G27870 ATPase E1-E2 type family protein / haloacid
dehalogenase-like hydrolase family protein		 -0.7 0.3 -0.31
79 AT5G12330 Lateral root primordium (LRP) protein-related LATERAL ROOT PRIMORDIUM 1 -0.7 0.32 -0.31
80 AT4G37295 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: stem, root, leaf;
EXPRESSED DURING: LP.06 six leaves visible, LP.04 four
leaves visible; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.7 0.32 -0.32
81 AT2G47410 WD40/YVTN repeat-like-containing domain;Bromodomain -0.69 0.29 -0.32
82 AT5G61140 U5 small nuclear ribonucleoprotein helicase -0.69 0.31 -0.32
83 AT5G58410 HEAT/U-box domain-containing protein -0.69 0.32 -0.32
84 AT3G10320 Glycosyltransferase family 61 protein -0.69 0.32 -0.31
85 AT2G42430 lateral organ boundaries-domain 16 ASYMMETRIC LEAVES2-LIKE 18,
lateral organ boundaries-domain 16		 -0.69 0.33 -0.29
86 AT3G13460 evolutionarily conserved C-terminal region 2 evolutionarily conserved
C-terminal region 2		 -0.68 0.32 -0.32
87 AT4G08780 Peroxidase superfamily protein -0.68 0.32 -0.31
88 AT1G79450 ALA-interacting subunit 5 ALA-interacting subunit 5 -0.68 0.34 -0.33
89 AT3G50370 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 26 plant
structures; EXPRESSED DURING: 15 growth stages; Has 27734
Blast hits to 16708 proteins in 1259 species: Archae - 81;
Bacteria - 3434; Metazoa - 10876; Fungi - 2514; Plants -
987; Viruses - 212; Other Eukaryotes - 9630 (source: NCBI
BLink).		 -0.67 0.3 -0.3
90 AT5G13280 aspartate kinase 1 ASPARTATE KINASE, aspartate kinase
1, ASPARTATE KINASE 1		 -0.67 0.32 -0.31
91 AT3G63010 alpha/beta-Hydrolases superfamily protein ATGID1B, GA INSENSITIVE DWARF1B -0.67 0.33 -0.28
92 AT1G36510 Nucleic acid-binding proteins superfamily -0.67 0.34 -0.32
93 AT1G26110 decapping 5 decapping 5 -0.67 0.3 -0.34
94 AT2G25940 alpha-vacuolar processing enzyme alpha-vacuolar processing enzyme,
ALPHAVPE		 -0.67 0.31 -0.29
95 AT4G32640 Sec23/Sec24 protein transport family protein -0.67 0.32 -0.31
96 AT1G04120 multidrug resistance-associated protein 5 ATP-binding cassette C5,
Arabidopsis thaliana ATP-binding
cassette C5, multidrug
resistance-associated protein 5,
MULTIDRUG RESISTANCE PROTEIN 5,
multidrug resistance-associated
protein 5		 -0.67 0.3 -0.3
97 AT3G11910 ubiquitin-specific protease 13 AtUBP13, ubiquitin-specific
protease 13		 -0.67 0.34 -0.32
98 AT3G07274 unknown pseudogene -0.67 0.3 -0.32
99 AT1G53180 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 13 plant
structures; EXPRESSED DURING: 6 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G15115.1); Has 58 Blast hits to 56 proteins in 22
species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 4;
Plants - 29; Viruses - 0; Other Eukaryotes - 19 (source:
NCBI BLink).		 -0.67 0.31 -0.32
100 AT4G38440 LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 12 growth stages; CONTAINS InterPro
DOMAIN/s: RNA polymerase II-associated protein 1,
C-terminal (InterPro:IPR013929), RNA polymerase
II-associated protein 1, N-terminal (InterPro:IPR013930);
Has 276 Blast hits to 220 proteins in 102 species: Archae -
0; Bacteria - 2; Metazoa - 151; Fungi - 65; Plants - 41;
Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).		 MINIYO -0.66 0.31 -0.33
101 AT1G09230 RNA-binding (RRM/RBD/RNP motifs) family protein -0.66 0.3 -0.32
102 AT2G31970 DNA repair-recombination protein (RAD50) ATRAD50, RAD50 -0.66 0.32 -0.32
103 AT4G15550 indole-3-acetate beta-D-glucosyltransferase indole-3-acetate
beta-D-glucosyltransferase		 -0.66 0.3 -0.34
104 AT4G32070 Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein
/ tetratricopeptide repeat (TPR)-containing protein		 Phox4 -0.66 0.33 -0.33
105 AT3G14680 cytochrome P450, family 72, subfamily A, polypeptide 14 cytochrome P450, family 72,
subfamily A, polypeptide 14		 -0.66 0.33 -0.32
106 AT5G01290 mRNA capping enzyme family protein -0.66 0.29 -0.33
107 AT3G04740 RNA polymerase II transcription mediators ARABIDOPSIS MEDIATOR COMPONENTS
14, MEDIATOR COMPONENTS 14,
STRUWWELPETER		 -0.65 0.28 -0.35
108 AT3G03380 DegP protease 7 degradation of periplasmic
proteins 7, DegP protease 7		 -0.65 0.3 -0.28
109 AT5G59590 UDP-glucosyl transferase 76E2 UDP-glucosyl transferase 76E2 -0.65 0.32 -0.3
110 AT3G01540 DEAD box RNA helicase 1 ARABIDOPSIS THALIANA DEAD BOX RNA
HELICASE 1, DEAD box RNA helicase
1		 -0.65 0.3 -0.31
111 AT1G03280 Transcription factor TFIIE, alpha subunit -0.65 0.32 -0.32
112 AT4G15270 glucosyltransferase-related -0.65 0.31 -0.31
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
113 C0227 Ribose D-Ribose D-Ribose ribose degradation,
guanosine nucleotides degradation I,
pyrimidine salvage pathway,
pyridine nucleotide cycling (plants),
adenine and adenosine salvage II,
guanosine nucleotides degradation II,
guanine and guanosine salvage II,
cis-zeatin biosynthesis,
adenosine nucleotides degradation I,
pyrimidine ribonucleosides degradation II 		-0.74 0.45 -0.47 C0227