AT2G20340 : -
Query Information
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AGICode AT2G20340
Description Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G20340 Pyridoxal phosphate (PLP)-dependent transferases
superfamily protein		 1 0.32 -0.29
2 AT3G55130 white-brown complex homolog 19 ATP-binding cassette G19,
white-brown complex homolog 19,
white-brown complex homolog 19		 0.78 0.34 -0.32
3 AT5G24660 response to low sulfur 2 RESPONSE TO LOW SULFUR 2 0.78 0.3 -0.3
4 AT1G24530 Transducin/WD40 repeat-like superfamily protein -0.78 0.33 -0.32
5 AT1G33790 jacalin lectin family protein -0.77 0.33 -0.3
6 AT3G56710 sigma factor binding protein 1 sigma factor binding protein 1 0.76 0.29 -0.32
7 AT4G39190 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G21560.1); Has 5536 Blast hits
to 3562 proteins in 401 species: Archae - 12; Bacteria -
497; Metazoa - 1363; Fungi - 374; Plants - 149; Viruses -
22; Other Eukaryotes - 3119 (source: NCBI BLink).		 0.76 0.29 -0.35
8 AT1G13090 cytochrome P450, family 71, subfamily B, polypeptide 28 cytochrome P450, family 71,
subfamily B, polypeptide 28		 0.75 0.31 -0.32
9 AT4G15440 hydroperoxide lyase 1 CYP74B2, hydroperoxide lyase 1 0.75 0.31 -0.32
10 AT5G52320 cytochrome P450, family 96, subfamily A, polypeptide 4 cytochrome P450, family 96,
subfamily A, polypeptide 4		 0.75 0.31 -0.31
11 AT1G79380 Ca(2)-dependent phospholipid-binding protein (Copine)
family		 0.74 0.32 -0.3
12 AT5G44320 Eukaryotic translation initiation factor 3 subunit 7
(eIF-3)		 -0.74 0.32 -0.32
13 AT3G49580 response to low sulfur 1 RESPONSE TO LOW SULFUR 1 0.73 0.32 -0.33
14 AT4G23670 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 0.73 0.3 -0.33
15 AT3G14230 related to AP2 2 related to AP2 2 -0.73 0.29 -0.3
16 AT4G32460 Protein of unknown function, DUF642 -0.73 0.31 -0.3
17 AT1G50920 Nucleolar GTP-binding protein -0.73 0.32 -0.32
18 AT1G70210 CYCLIN D1;1 ATCYCD1;1, CYCLIN D1;1 0.72 0.31 -0.33
19 AT5G49560 Putative methyltransferase family protein -0.72 0.35 -0.31
20 AT1G62770 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.72 0.31 -0.31
21 AT1G78680 gamma-glutamyl hydrolase 2 gamma-glutamyl hydrolase 2,
gamma-glutamyl hydrolase 2		 0.71 0.34 -0.32
22 AT5G46240 potassium channel in Arabidopsis thaliana 1 potassium channel in Arabidopsis
thaliana 1		 0.71 0.32 -0.31
23 AT4G31820 Phototropic-responsive NPH3 family protein ENHANCER OF PINOID, MACCHI-BOU 4,
NAKED PINS IN YUC MUTANTS 1		 0.71 0.33 -0.32
24 AT4G26720 protein phosphatase X 1 PROTEIN PHOSPHATASE X-1, protein
phosphatase X 1		 -0.71 0.31 -0.32
25 AT5G23240 DNAJ heat shock N-terminal domain-containing protein 0.71 0.32 -0.34
26 AT5G47550 Cystatin/monellin superfamily protein -0.71 0.31 -0.3
27 AT1G71480 Nuclear transport factor 2 (NTF2) family protein 0.7 0.3 -0.32
28 AT4G27435 Protein of unknown function (DUF1218) 0.7 0.32 -0.3
29 AT3G16310 mitotic phosphoprotein N' end (MPPN) family protein -0.7 0.32 -0.33
30 AT5G40670 PQ-loop repeat family protein / transmembrane family
protein		 0.7 0.33 -0.31
31 AT5G62280 Protein of unknown function (DUF1442) -0.7 0.3 -0.31
32 AT4G31120 SHK1 binding protein 1 ATPRMT5, PROTEIN ARGININE
METHYLTRANSFERASE 5, SHK1 binding
protein 1		 -0.7 0.31 -0.29
33 AT1G75590 SAUR-like auxin-responsive protein family -0.7 0.34 -0.34
34 AT3G10940 dual specificity protein phosphatase (DsPTP1) family
protein		 LIKE SEX4 2 0.69 0.32 -0.31
35 AT3G50890 homeobox protein 28 homeobox protein 28, homeobox
protein 28, ZINC FINGER
HOMEODOMAIN 7		 0.69 0.32 -0.33
36 AT5G48850 Tetratricopeptide repeat (TPR)-like superfamily protein SULPHUR DEFICIENCY-INDUCED 1 0.69 0.3 -0.32
37 AT1G19700 BEL1-like homeodomain 10 BEL1-like homeodomain 10,
BEL1-LIKE HOMEODOMAIN 10		 0.69 0.32 -0.34
38 AT1G02870 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Ribosome biogenesis protein Nop16
(InterPro:IPR019002); Has 104 Blast hits to 104 proteins in
57 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
63; Plants - 35; Viruses - 0; Other Eukaryotes - 6 (source:
NCBI BLink).		 -0.69 0.32 -0.3
39 AT3G56050 Protein kinase family protein 0.68 0.31 -0.31
40 AT2G46630 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages; Has
110095 Blast hits to 59224 proteins in 2216 species: Archae
- 177; Bacteria - 15429; Metazoa - 38345; Fungi - 18843;
Plants - 13341; Viruses - 3084; Other Eukaryotes - 20876
(source: NCBI BLink).		 0.68 0.32 -0.29
41 AT1G19630 cytochrome P450, family 722, subfamily A, polypeptide 1 cytochrome P450, family 722,
subfamily A, polypeptide 1		 0.68 0.32 -0.32
42 AT1G78200 Protein phosphatase 2C family protein 0.68 0.31 -0.3
43 AT2G17360 Ribosomal protein S4 (RPS4A) family protein -0.68 0.33 -0.31
44 AT3G03920 H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein -0.68 0.31 -0.3
45 AT4G24010 cellulose synthase like G1 ARABIDOPSIS THALIANA CELLULOSE
SYNTHASE LIKE G1, cellulose
synthase like G1		 0.68 0.32 -0.31
46 AT4G22850 SNARE associated Golgi protein family -0.68 0.32 -0.34
47 AT1G06900 Insulinase (Peptidase family M16) family protein -0.68 0.32 -0.32
48 AT4G10360 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing
protein		 0.67 0.33 -0.33
49 AT3G04820 Pseudouridine synthase family protein -0.67 0.3 -0.35
50 AT1G22730 MA3 domain-containing protein -0.67 0.31 -0.3
51 AT1G56020 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G12970.1); Has 3011 Blast hits
to 958 proteins in 192 species: Archae - 0; Bacteria - 193;
Metazoa - 479; Fungi - 286; Plants - 158; Viruses - 8;
Other Eukaryotes - 1887 (source: NCBI BLink).		 -0.67 0.32 -0.3
52 AT5G52470 fibrillarin 1 ATFBR1, ATFIB1, FIBRILLARIN 1,
fibrillarin 1,
SKP1/ASK1-INTERACTING PROTEIN		 -0.67 0.31 -0.31
53 AT3G23610 dual specificity protein phosphatase 1 dual specificity protein
phosphatase 1		 0.67 0.33 -0.31
54 AT5G09970 cytochrome P450, family 78, subfamily A, polypeptide 7 cytochrome P450, family 78,
subfamily A, polypeptide 7		 -0.67 0.31 -0.31
55 AT5G57190 phosphatidylserine decarboxylase 2 phosphatidylserine decarboxylase 2 0.66 0.32 -0.33
56 AT1G20900 Predicted AT-hook DNA-binding family protein AT-hook motif nuclear-localized
protein 27, ESCAROLA, ORESARA 7		 -0.66 0.31 -0.31
57 AT3G17700 cyclic nucleotide-binding transporter 1 CYCLIC NUCLEOTIDE-GATED CHANNEL
20, cyclic nucleotide-binding
transporter 1, CNGC20		 0.66 0.32 -0.31
58 AT4G15570 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 MAGATAMA 3 -0.66 0.33 -0.3
59 AT5G62130 Per1-like family protein 0.66 0.31 -0.31
60 AT2G32070 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 -0.66 0.33 -0.31
61 AT3G24760 Galactose oxidase/kelch repeat superfamily protein 0.66 0.3 -0.33
62 AT1G52980 GTP-binding family protein nuclear/nucleolar GTPase 2,
nuclear/nucleolar GTPase 2		 -0.66 0.31 -0.33
63 AT1G09620 ATP binding;leucine-tRNA ligases;aminoacyl-tRNA
ligases;nucleotide binding;ATP binding;aminoacyl-tRNA
ligases		 -0.66 0.33 -0.31
64 AT2G27330 RNA-binding (RRM/RBD/RNP motifs) family protein -0.66 0.33 -0.33
65 AT1G20823 RING/U-box superfamily protein 0.66 0.31 -0.33
66 AT2G38740 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 0.66 0.32 -0.33
67 AT3G46210 Ribosomal protein S5 domain 2-like superfamily protein -0.66 0.31 -0.33
68 AT1G18400 BR enhanced expression 1 BR enhanced expression 1 -0.66 0.32 -0.31
69 AT2G39980 HXXXD-type acyl-transferase family protein -0.65 0.32 -0.31
70 AT1G30160 Protein of unknown function (DUF295) 0.65 0.34 -0.31
71 AT5G04960 Plant invertase/pectin methylesterase inhibitor superfamily -0.65 0.32 -0.31
72 AT2G17300 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G35320.1); Has 42 Blast
hits to 42 proteins in 10 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.65 0.31 -0.3
73 AT4G11240 Calcineurin-like metallo-phosphoesterase superfamily
protein		 TOPP7 -0.65 0.31 -0.31
74 AT5G22310 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G11590.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.65 0.28 -0.32
75 AT2G39890 proline transporter 1 PROLINE TRANSPORTER 1, proline
transporter 1		 0.65 0.31 -0.3
76 AT3G16280 Integrase-type DNA-binding superfamily protein 0.65 0.32 -0.31
77 AT2G20950 Arabidopsis phospholipase-like protein (PEARLI 4) family 0.65 0.31 -0.33
78 AT5G02620 ankyrin-like1 ankyrin-like1, ATANK1 0.65 0.32 -0.29
79 AT3G06790 plastid developmental protein DAG, putative -0.64 0.34 -0.31
80 AT4G02420 Concanavalin A-like lectin protein kinase family protein 0.64 0.3 -0.3
81 AT2G39435 Phosphatidylinositol N-acetyglucosaminlytransferase subunit
P-related		 0.64 0.32 -0.35
82 AT3G43600 aldehyde oxidase 2 aldehyde oxidase 2, aldehyde
oxidase 3, Aldehyde oxidase gamma,
Arabidopsis thaliana aldehyde
oxidase 2, Arabidopsis thaliana
aldehyde oxidase 3		 -0.64 0.33 -0.31
83 AT1G56710 Pectin lyase-like superfamily protein 0.64 0.31 -0.31
84 AT3G59900 auxin-regulated gene involved in organ size AUXIN-REGULATED GENE INVOLVED IN
ORGAN SIZE		 -0.64 0.33 -0.31
85 AT5G24655 response to low sulfur 4 RESPONSE TO LOW SULFUR 4 0.64 0.3 -0.36
86 AT2G34750 RNA polymerase I specific transcription initiation factor
RRN3 protein		 -0.64 0.33 -0.31
87 AT2G19780 Leucine-rich repeat (LRR) family protein 0.64 0.33 -0.3
88 AT4G37580 Acyl-CoA N-acyltransferases (NAT) superfamily protein CONSTITUTIVE PHOTOMORPHOGENIC 3,
HOOKLESS 1, UNUSUAL SUGAR RESPONSE
2		 -0.64 0.3 -0.33
89 AT5G40540 Protein kinase superfamily protein -0.64 0.32 -0.31
90 AT5G37990 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.64 0.33 -0.31
91 AT1G25260 Ribosomal protein L10 family protein -0.64 0.3 -0.3
92 AT5G61370 Pentatricopeptide repeat (PPR) superfamily protein -0.64 0.3 -0.32
93 AT5G14920 Gibberellin-regulated family protein -0.64 0.33 -0.32
94 AT4G04990 Protein of unknown function (DUF761) 0.64 0.32 -0.31
95 AT5G16800 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0.64 0.29 -0.31
96 AT3G01790 Ribosomal protein L13 family protein -0.64 0.31 -0.33
97 AT4G39070 B-box zinc finger family protein -0.63 0.33 -0.3
98 AT2G02850 plantacyanin plantacyanin -0.63 0.33 -0.31
99 AT5G55140 ribosomal protein L30 family protein -0.63 0.32 -0.33
100 AT5G58660 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.63 0.32 -0.29
101 AT4G02230 Ribosomal protein L19e family protein -0.63 0.32 -0.32
102 AT1G54970 proline-rich protein 1 proline-rich protein 1,
proline-rich protein 1, ROOT HAIR
SPECIFIC 7		 -0.63 0.34 -0.31
103 AT3G51410 Arabidopsis protein of unknown function (DUF241) -0.63 0.33 -0.33
104 AT2G23430 Cyclin-dependent kinase inhibitor family protein ICK1, KIP-RELATED PROTEIN 1 0.63 0.3 -0.34
105 AT4G26010 Peroxidase superfamily protein -0.63 0.3 -0.31
106 AT4G17480 alpha/beta-Hydrolases superfamily protein 0.63 0.31 -0.3
107 AT5G02450 Ribosomal protein L36e family protein -0.63 0.29 -0.31
108 AT5G67060 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 HECATE 1 -0.63 0.3 -0.3
109 AT2G03820 nonsense-mediated mRNA decay NMD3 family protein -0.63 0.33 -0.32
110 AT3G19120 PIF / Ping-Pong family of plant transposases -0.62 0.32 -0.29
111 AT1G10840 translation initiation factor 3 subunit H1 translation initiation factor 3
subunit H1		 -0.62 0.3 -0.31
112 AT5G23050 acyl-activating enzyme 17 acyl-activating enzyme 17 0.62 0.32 -0.32
113 AT5G27920 F-box family protein -0.62 0.29 -0.31
114 AT2G16070 plastid division2 PLASTID DIVISION2 0.62 0.32 -0.33
115 AT1G79470 Aldolase-type TIM barrel family protein -0.62 0.31 -0.32
116 AT2G47420 Ribosomal RNA adenine dimethylase family protein adenosine dimethyl transferase 1A -0.62 0.3 -0.33
117 AT1G04610 YUCCA 3 YUCCA 3 -0.62 0.29 -0.31
118 AT5G28060 Ribosomal protein S24e family protein -0.62 0.31 -0.31
119 AT5G21160 LA RNA-binding protein -0.62 0.3 -0.31
120 AT3G22320 Eukaryotic rpb5 RNA polymerase subunit family protein ATRPABC24.3, NRPB5, NRPD5, RNA
POLYMERASE II FIFTH LARGEST
SUBUNIT, A		 -0.62 0.31 -0.35
121 AT1G08610 Pentatricopeptide repeat (PPR) superfamily protein -0.62 0.32 -0.31
122 AT1G09570 phytochrome A FAR RED ELONGATED HYPOCOTYL 2, FAR
RED ELONGATED 1, ELONGATED
HYPOCOTYL 8, phytochrome A		 -0.62 0.31 -0.3
123 AT4G34970 actin depolymerizing factor 9 actin depolymerizing factor 9 -0.62 0.3 -0.33
124 AT5G01230 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.61 0.34 -0.32
125 AT3G25970 Pentatricopeptide repeat (PPR) superfamily protein -0.61 0.32 -0.33
126 AT5G54040 Cysteine/Histidine-rich C1 domain family protein -0.61 0.33 -0.31
127 AT2G19590 ACC oxidase 1 ACC oxidase 1, ATACO1 -0.61 0.33 -0.34
128 AT1G54040 epithiospecifier protein epithiospecifier protein,
EPITHIOSPECIFYING SENESCENCE
REGULATOR, TASTY		 0.61 0.34 -0.31
129 AT3G56260 unknown protein; Has 20 Blast hits to 19 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 2;
Plants - 10; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 0.61 0.31 -0.31
130 AT4G38410 Dehydrin family protein -0.61 0.3 -0.32
131 AT4G02270 root hair specific 13 root hair specific 13 -0.61 0.3 -0.33
132 AT4G00390 DNA-binding storekeeper protein-related transcriptional
regulator		 -0.61 0.3 -0.32
133 AT3G21510 histidine-containing phosphotransmitter 1 histidine-containing
phosphotransmitter 1		 -0.61 0.31 -0.3
134 AT1G04510 MOS4-associated complex 3A MOS4-associated complex 3A -0.61 0.33 -0.3
135 AT3G54980 Pentatricopeptide repeat (PPR) superfamily protein -0.61 0.33 -0.31
136 AT3G50750 BES1/BZR1 homolog 1 BES1/BZR1 homolog 1 0.61 0.31 -0.32
137 AT2G20520 FASCICLIN-like arabinogalactan 6 FASCICLIN-like arabinogalactan 6 -0.61 0.32 -0.31
138 AT1G30880 unknown protein; Has 24 Blast hits to 24 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0;
Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.61 0.31 -0.29
139 AT5G56220 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.61 0.33 -0.31
140 AT3G05250 RING/U-box superfamily protein 0.61 0.33 -0.35
141 AT3G60190 DYNAMIN-like 1E DYNAMIN-like 1E, ARABIDOPSIS
DYNAMIN-LIKE 4, DYNAMIN-LIKE
PROTEIN 2, DYNAMIN-like 1E,
DYNAMIN-RELATED PROTEIN 1E,
ENHANCED DISEASE RESISTANCE 3		 0.6 0.32 -0.32
142 AT3G59010 pectin methylesterase 61 pectin methylesterase 61 0.6 0.33 -0.32
143 AT1G02120 GRAM domain family protein VASCULAR ASSOCIATED DEATH1 0.6 0.3 -0.32
144 AT3G43800 glutathione S-transferase tau 27 glutathione S-transferase tau 27,
glutathione S-transferase tau 27		 0.6 0.31 -0.31
145 AT1G78130 Major facilitator superfamily protein unfertilized embryo sac 2 0.6 0.32 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
146 C0031 3-Methylthio-n-propylglucosinolate - 3-Methylthiopropylglucosinolate glucosinolate biosynthesis from homomethionine -0.71 0.43 -0.45 C0031
147 C0126 Isorhamnetin-dirhamnoside - - - -0.7 0.48 -0.46
148 C0107 Glycine - Glycine 5-aminoimidazole ribonucleotide biosynthesis I,
gamma-glutamyl cycle,
folate polyglutamylation,
gamma-glutamyl cycle (plant pathway),
glutathione biosynthesis,
glutathione-mediated detoxification II,
folate transformations II,
indole glucosinolate breakdown (active in intact plant cell),
glycine cleavage complex,
camalexin biosynthesis,
thiamine biosynthesis II,
tRNA charging,
glycine biosynthesis,
glutathione degradation,
photorespiration 		0.63 0.46 -0.44 C0107
149 C0177 MST_2429.6 - - - 0.63 0.48 -0.45