AGICode | AT2G18450 |
Description | succinate dehydrogenase 1-2 |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT2G18450 | succinate dehydrogenase 1-2 | succinate dehydrogenase 1-2 | 1 | 0.3 | -0.32 | ||
2 | AT3G60600 | vesicle associated protein | (AT)VAP, vesicle associated protein, VAP27, VAMP/SYNAPTOBREVIN-ASSOCIATED PROTEIN 27-1 |
0.68 | 0.31 | -0.32 | ||
3 | AT4G15690 | Thioredoxin superfamily protein | 0.67 | 0.31 | -0.31 | |||
4 | AT4G15660 | Thioredoxin superfamily protein | 0.67 | 0.3 | -0.34 | |||
5 | AT4G20450 | Leucine-rich repeat protein kinase family protein | 0.64 | 0.3 | -0.3 | |||
6 | AT3G07490 | ARF-GAP domain 11 | ARF-GAP domain 11, AtCML3, calmodulin-like 3 |
0.64 | 0.33 | -0.3 | ||
7 | AT4G27690 | vacuolar protein sorting 26B | vacuolar protein sorting 26B | 0.63 | 0.31 | -0.31 | ||
8 | AT3G16110 | PDI-like 1-6 | ARABIDOPSIS THALIANA PROTEIN DISULFIDE ISOMERASE 4, PDI-like 1-6, PROTEIN DISULFIDE ISOMERASE 4, PDI-like 1-6 |
0.63 | 0.33 | -0.31 | ||
9 | AT1G65270 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; Has 149 Blast hits to 149 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 98; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). |
0.62 | 0.31 | -0.32 | |||
10 | AT4G24620 | phosphoglucose isomerase 1 | PGI, phosphoglucose isomerase 1 | 0.62 | 0.32 | -0.33 | ||
11 | AT4G17245 | RING/U-box superfamily protein | 0.61 | 0.3 | -0.34 | |||
12 | AT5G24400 | NagB/RpiA/CoA transferase-like superfamily protein | EMBRYO DEFECTIVE 2024, 6-PHOSPHOGLUCONOLACTONASE 3 |
0.61 | 0.29 | -0.31 | ||
13 | AT4G04840 | methionine sulfoxide reductase B6 | methionine sulfoxide reductase B6, methionine sulfoxide reductase B6 |
0.61 | 0.32 | -0.32 | ||
14 | AT4G13390 | Proline-rich extensin-like family protein | extensin 12 | 0.59 | 0.32 | -0.3 | ||
15 | AT2G19300 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 4 Blast hits to 4 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.59 | 0.29 | -0.31 | |||
16 | AT1G70460 | root hair specific 10 | proline-rich extensin-like receptor kinase 13, proline-rich extensin-like receptor kinase 13, root hair specific 10 |
0.58 | 0.31 | -0.31 | ||
17 | AT2G17880 | Chaperone DnaJ-domain superfamily protein | 0.58 | 0.3 | -0.29 | |||
18 | AT1G51160 | SNARE-like superfamily protein | 0.57 | 0.31 | -0.31 | |||
19 | AT4G29260 | HAD superfamily, subfamily IIIB acid phosphatase | 0.57 | 0.32 | -0.3 | |||
20 | AT1G01780 | GATA type zinc finger transcription factor family protein | PLIM2b | 0.57 | 0.31 | -0.31 | ||
21 | AT5G46440 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G46460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.57 | 0.29 | -0.3 | |||
22 | AT4G24500 | hydroxyproline-rich glycoprotein family protein | 0.56 | 0.31 | -0.33 | |||
23 | AT5G62310 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein |
INCOMPLETE ROOT HAIR ELONGATION | 0.56 | 0.32 | -0.34 | ||
24 | AT5G12910 | Histone superfamily protein | -0.56 | 0.3 | -0.31 | |||
25 | AT5G58830 | Subtilisin-like serine endopeptidase family protein | -0.56 | 0.3 | -0.3 | |||
26 | AT1G18940 | Nodulin-like / Major Facilitator Superfamily protein | 0.55 | 0.33 | -0.32 | |||
27 | AT4G17585 | Aluminium activated malate transporter family protein | -0.55 | 0.33 | -0.34 | |||
28 | AT4G36410 | ubiquitin-conjugating enzyme 17 | ubiquitin-conjugating enzyme 17 | 0.55 | 0.31 | -0.29 | ||
29 | AT4G05310 | Ubiquitin-like superfamily protein | 0.55 | 0.31 | -0.31 | |||
30 | AT3G57510 | Pectin lyase-like superfamily protein | ADPG1 | 0.55 | 0.31 | -0.32 | ||
31 | AT5G25120 | ytochrome p450, family 71, subfamily B, polypeptide 11 | ytochrome p450, family 71, subfamily B, polypeptide 11 |
-0.54 | 0.32 | -0.29 | ||
32 | AT1G47610 | Transducin/WD40 repeat-like superfamily protein | -0.54 | 0.32 | -0.33 | |||
33 | AT2G13070 | transposable element gene | 0.54 | 0.31 | -0.33 | |||
34 | AT2G42860 | unknown protein; Has 446 Blast hits to 326 proteins in 94 species: Archae - 0; Bacteria - 32; Metazoa - 113; Fungi - 93; Plants - 21; Viruses - 4; Other Eukaryotes - 183 (source: NCBI BLink). |
-0.53 | 0.32 | -0.31 | |||
35 | AT3G26930 | Protein with RNI-like/FBD-like domains | -0.53 | 0.31 | -0.32 | |||
36 | AT1G17010 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
-0.52 | 0.29 | -0.31 | |||
37 | AT5G32490 | transposable element gene | -0.52 | 0.34 | -0.32 | |||
38 | AT2G31160 | Protein of unknown function (DUF640) | LIGHT SENSITIVE HYPOCOTYLS 3, ORGAN BOUNDARY 1 |
-0.5 | 0.32 | -0.33 | ||
39 | AT5G20390 | Glycosyl hydrolase superfamily protein | -0.5 | 0.32 | -0.3 | |||
40 | AT2G29970 | Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein |
-0.5 | 0.32 | -0.35 | |||
41 | AT5G45800 | Leucine-rich repeat protein kinase family protein | maternal effect embryo arrest 62 | -0.5 | 0.33 | -0.31 | ||
42 | AT3G07250 | nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein |
-0.49 | 0.33 | -0.33 | |||
43 | AT5G40290 | HD domain-containing metal-dependent phosphohydrolase family protein |
-0.49 | 0.32 | -0.31 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
44 | C0138 | Linarin | - | - | - | 0.72 | 0.42 | -0.43 | ||
45 | C0127 | Isorhamnetin-hexosyl-rhamnoside | - | - | - | 0.64 | 0.46 | -0.43 | ||
46 | C0148 | Methionine | D,L-Methionine | L-Methionine | thiamine biosynthesis II, S-adenosyl-L-methionine biosynthesis, S-adenosyl-L-methionine cycle II, tRNA charging, methionine degradation II, ethylene biosynthesis I (plants), methionine degradation I (to homocysteine), S-methylmethionine cycle, methionine salvage pathway, methionine biosynthesis II, folate transformations II, homomethionine biosynthesis, lipoate biosynthesis and incorporation I, S-methyl-5-thio-alpha-D-ribose 1-phosphate degradation |
-0.54 | 0.33 | -0.33 |