AGICode | AT2G16700 |
Description | actin depolymerizing factor 5 |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT2G16700 | actin depolymerizing factor 5 | actin depolymerizing factor 5, ATADF5 |
1 | 0.35 | -0.31 | ||
2 | AT4G24040 | trehalase 1 | ATTRE1, trehalase 1 | 0.8 | 0.32 | -0.32 | ||
3 | AT1G28520 | vascular plant one zinc finger protein | VASCULAR PLANT ONE ZINC FINGER PROTEIN, vascular plant one zinc finger protein |
0.75 | 0.34 | -0.3 | ||
4 | AT1G67970 | heat shock transcription factor A8 | AT-HSFA8, heat shock transcription factor A8 |
0.75 | 0.32 | -0.31 | ||
5 | AT2G16710 | Iron-sulphur cluster biosynthesis family protein | 0.75 | 0.32 | -0.29 | |||
6 | AT5G67480 | BTB and TAZ domain protein 4 | ATBT4, BTB and TAZ domain protein 4 |
0.72 | 0.32 | -0.32 | ||
7 | AT1G21670 | LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40-like Beta Propeller (InterPro:IPR011659), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: DPP6 N-terminal domain-like protein (TAIR:AT1G21680.1); Has 8461 Blast hits to 5060 proteins in 1257 species: Archae - 79; Bacteria - 5567; Metazoa - 37; Fungi - 70; Plants - 117; Viruses - 0; Other Eukaryotes - 2591 (source: NCBI BLink). |
0.71 | 0.31 | -0.32 | |||
8 | AT5G26731 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.71 | 0.3 | -0.3 | |||
9 | AT5G46050 | peptide transporter 3 | ARABIDOPSIS THALIANA PEPTIDE TRANSPORTER 3, peptide transporter 3 |
0.7 | 0.31 | -0.33 | ||
10 | AT3G60250 | casein kinase II beta chain 3 | casein kinase II beta chain 3 | 0.69 | 0.3 | -0.29 | ||
11 | AT5G14530 | Transducin/WD40 repeat-like superfamily protein | 0.69 | 0.33 | -0.31 | |||
12 | AT4G03110 | RNA-binding protein-defense related 1 | RNA-binding protein-defense related 1, RNA-binding protein-defense related 1 |
-0.69 | 0.34 | -0.32 | ||
13 | AT5G50740 | Heavy metal transport/detoxification superfamily protein | -0.69 | 0.31 | -0.3 | |||
14 | AT5G42900 | cold regulated gene 27 | cold regulated gene 27 | 0.68 | 0.31 | -0.32 | ||
15 | AT4G31670 | ubiquitin-specific protease 18 | ubiquitin-specific protease 18 | 0.68 | 0.3 | -0.32 | ||
16 | AT1G20696 | high mobility group B3 | high mobility group B3, NFD03, NFD3 |
0.68 | 0.31 | -0.31 | ||
17 | AT1G10070 | branched-chain amino acid transaminase 2 | branched-chain amino acid transaminase 2, branched-chain amino acid transaminase 2 |
0.68 | 0.32 | -0.32 | ||
18 | AT5G14270 | bromodomain and extraterminal domain protein 9 | bromodomain and extraterminal domain protein 9, bromodomain and extraterminal domain protein 9 |
0.68 | 0.31 | -0.33 | ||
19 | AT5G47820 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
FRAGILE FIBER 1 | -0.67 | 0.3 | -0.33 | ||
20 | AT1G18890 | calcium-dependent protein kinase 1 | calcium-dependent protein kinase 1, AtCPK10, calcium-dependent protein kinase 1, CPK10 |
0.66 | 0.34 | -0.32 | ||
21 | AT3G51150 | ATP binding microtubule motor family protein | -0.66 | 0.3 | -0.32 | |||
22 | AT2G21180 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19875.1); Has 124 Blast hits to 124 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.66 | 0.35 | -0.32 | |||
23 | AT2G02220 | phytosulfokin receptor 1 | PHYTOSULFOKIN RECEPTOR 1, phytosulfokin receptor 1 |
0.66 | 0.32 | -0.31 | ||
24 | AT5G55380 | MBOAT (membrane bound O-acyl transferase) family protein | -0.65 | 0.33 | -0.32 | |||
25 | AT4G00480 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
ATMYC1, myc1 | -0.65 | 0.33 | -0.31 | ||
26 | AT5G20620 | ubiquitin 4 | ubiquitin 4 | 0.65 | 0.29 | -0.31 | ||
27 | AT1G02180 | ferredoxin-related | -0.65 | 0.31 | -0.32 | |||
28 | AT2G45210 | SAUR-like auxin-responsive protein family | 0.65 | 0.32 | -0.32 | |||
29 | AT1G11160 | Transducin/WD40 repeat-like superfamily protein | -0.65 | 0.31 | -0.3 | |||
30 | AT5G06265 | hyaluronan mediated motility receptor-related | -0.65 | 0.32 | -0.32 | |||
31 | AT2G36320 | A20/AN1-like zinc finger family protein | 0.64 | 0.34 | -0.31 | |||
32 | AT1G11210 | Protein of unknown function (DUF761) | 0.64 | 0.31 | -0.32 | |||
33 | AT2G16270 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16630.1); Has 1844 Blast hits to 1256 proteins in 271 species: Archae - 6; Bacteria - 283; Metazoa - 434; Fungi - 153; Plants - 91; Viruses - 52; Other Eukaryotes - 825 (source: NCBI BLink). |
-0.64 | 0.3 | -0.33 | |||
34 | AT3G30180 | brassinosteroid-6-oxidase 2 | brassinosteroid-6-oxidase 2, CYP85A2 |
0.64 | 0.31 | -0.29 | ||
35 | AT1G70520 | cysteine-rich RLK (RECEPTOR-like protein kinase) 2 | ALTERED SEED GERMINATION 6, cysteine-rich RLK (RECEPTOR-like protein kinase) 2 |
0.64 | 0.33 | -0.33 | ||
36 | AT5G39590 | TLD-domain containing nucleolar protein | 0.64 | 0.32 | -0.31 | |||
37 | AT3G51890 | Clathrin light chain protein | 0.64 | 0.34 | -0.32 | |||
38 | AT2G33830 | Dormancy/auxin associated family protein | 0.63 | 0.31 | -0.32 | |||
39 | AT3G04010 | O-Glycosyl hydrolases family 17 protein | 0.63 | 0.3 | -0.31 | |||
40 | AT4G33980 | BEST Arabidopsis thaliana protein match is: cold regulated gene 27 (TAIR:AT5G42900.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.63 | 0.31 | -0.33 | |||
41 | AT3G48530 | SNF1-related protein kinase regulatory subunit gamma 1 | SNF1-related protein kinase regulatory subunit gamma 1 |
0.62 | 0.32 | -0.33 | ||
42 | AT4G18820 | AAA-type ATPase family protein | -0.62 | 0.32 | -0.32 | |||
43 | AT5G63640 | ENTH/VHS/GAT family protein | 0.62 | 0.32 | -0.3 | |||
44 | AT4G13100 | RING/U-box superfamily protein | -0.62 | 0.32 | -0.29 | |||
45 | AT2G41410 | Calcium-binding EF-hand family protein | 0.62 | 0.32 | -0.32 | |||
46 | AT1G58440 | FAD/NAD(P)-binding oxidoreductase family protein | SQUALENE EPOXIDASE 1, XF1 | -0.62 | 0.32 | -0.34 | ||
47 | AT2G24260 | LJRHL1-like 1 | LJRHL1-like 1 | 0.62 | 0.31 | -0.31 | ||
48 | AT1G74530 | unknown protein; Has 49 Blast hits to 49 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
-0.62 | 0.31 | -0.32 | |||
49 | AT2G02780 | Leucine-rich repeat protein kinase family protein | -0.61 | 0.31 | -0.3 | |||
50 | AT1G18290 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: root; Has 94 Blast hits to 94 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.61 | 0.31 | -0.32 | |||
51 | AT3G57920 | squamosa promoter binding protein-like 15 | squamosa promoter binding protein-like 15 |
-0.61 | 0.34 | -0.31 | ||
52 | AT1G71040 | Cupredoxin superfamily protein | Low Phosphate Root2 | 0.61 | 0.32 | -0.31 | ||
53 | AT5G58650 | plant peptide containing sulfated tyrosine 1 | plant peptide containing sulfated tyrosine 1 |
0.61 | 0.31 | -0.33 | ||
54 | AT3G08680 | Leucine-rich repeat protein kinase family protein | -0.61 | 0.31 | -0.33 | |||
55 | AT5G20450 | CONTAINS InterPro DOMAIN/s: Dilute (InterPro:IPR002710); BEST Arabidopsis thaliana protein match is: Myosin family protein with Dil domain (TAIR:AT5G20490.2); Has 1723 Blast hits to 1458 proteins in 355 species: Archae - 28; Bacteria - 353; Metazoa - 453; Fungi - 121; Plants - 353; Viruses - 3; Other Eukaryotes - 412 (source: NCBI BLink). |
-0.61 | 0.32 | -0.3 | |||
56 | AT2G23910 | NAD(P)-binding Rossmann-fold superfamily protein | 0.61 | 0.31 | -0.31 | |||
57 | AT3G26440 | Protein of unknown function (DUF707) | 0.61 | 0.32 | -0.31 | |||
58 | AT1G60460 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Has 23 Blast hits to 23 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.61 | 0.3 | -0.32 | |||
59 | AT1G61620 | phosphoinositide binding | 0.61 | 0.32 | -0.34 | |||
60 | AT4G28703 | RmlC-like cupins superfamily protein | 0.61 | 0.32 | -0.3 | |||
61 | AT3G01980 | NAD(P)-binding Rossmann-fold superfamily protein | -0.61 | 0.32 | -0.33 | |||
62 | AT2G40610 | expansin A8 | ATEXP8, expansin A8, ATHEXP ALPHA 1.11, EXP8, expansin A8 |
-0.61 | 0.33 | -0.3 | ||
63 | AT1G72500 | LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: inter-alpha-trypsin inhibitor heavy chain-related (TAIR:AT1G19110.1); Has 1407 Blast hits to 1406 proteins in 307 species: Archae - 6; Bacteria - 522; Metazoa - 484; Fungi - 59; Plants - 110; Viruses - 0; Other Eukaryotes - 226 (source: NCBI BLink). |
-0.6 | 0.32 | -0.34 | |||
64 | AT1G75420 | UDP-Glycosyltransferase superfamily protein | 0.6 | 0.31 | -0.3 | |||
65 | AT1G49630 | presequence protease 2 | presequence protease 2, presequence protease 2 |
-0.6 | 0.31 | -0.31 | ||
66 | AT2G44480 | beta glucosidase 17 | beta glucosidase 17 | 0.59 | 0.33 | -0.31 | ||
67 | AT1G64270 | transposable element gene | -0.59 | 0.32 | -0.32 | |||
68 | AT2G21130 | Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein |
0.59 | 0.31 | -0.3 | |||
69 | AT1G55530 | RING/U-box superfamily protein | 0.59 | 0.31 | -0.32 | |||
70 | AT4G20760 | NAD(P)-binding Rossmann-fold superfamily protein | -0.59 | 0.31 | -0.31 | |||
71 | AT3G07690 | 6-phosphogluconate dehydrogenase family protein | 0.58 | 0.32 | -0.31 | |||
72 | AT5G09390 | CD2-binding protein-related | 0.58 | 0.31 | -0.32 | |||
73 | AT5G40500 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.58 | 0.3 | -0.32 | |||
74 | AT1G26650 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G69430.1); Has 205 Blast hits to 204 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 205; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.58 | 0.33 | -0.33 | |||
75 | AT5G24240 | Phosphatidylinositol 3- and 4-kinase ;Ubiquitin family protein |
0.58 | 0.33 | -0.32 | |||
76 | AT1G04160 | myosin XI B | ARABIDOPSIS THALIANA MYOSIN XI B, MYOSIN XI-8, MYOSIN XI B, myosin XI B |
-0.58 | 0.32 | -0.3 | ||
77 | AT2G46330 | arabinogalactan protein 16 | arabinogalactan protein 16, ATAGP16 |
-0.58 | 0.31 | -0.31 | ||
78 | AT5G62900 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G50090.1); Has 157 Blast hits to 157 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 157; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.58 | 0.3 | -0.34 | |||
79 | AT4G27750 | binding | IMPAIRED SUCROSE INDUCTION 1 | 0.58 | 0.32 | -0.31 | ||
80 | AT1G53390 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
ATP-binding cassette G24 | -0.57 | 0.31 | -0.34 | ||
81 | AT5G27100 | glutamate receptor 2.1 | ARABIDOPSIS THALIANA GLUTAMATE RECEPTOR 2.1, glutamate receptor 2.1 |
-0.57 | 0.32 | -0.33 | ||
82 | AT2G36080 | AP2/B3-like transcriptional factor family protein | 0.57 | 0.29 | -0.3 | |||
83 | AT4G18290 | potassium channel in Arabidopsis thaliana 2 | potassium channel in Arabidopsis thaliana 2 |
-0.57 | 0.32 | -0.3 | ||
84 | AT1G41870 | transposable element gene | -0.57 | 0.33 | -0.33 | |||
85 | AT1G15490 | alpha/beta-Hydrolases superfamily protein | -0.57 | 0.32 | -0.31 | |||
86 | AT5G27270 | Tetratricopeptide repeat (TPR)-like superfamily protein | EMBRYO DEFECTIVE 976 | -0.57 | 0.31 | -0.33 | ||
87 | AT4G10770 | oligopeptide transporter 7 | ARABIDOPSIS THALIANA OLIGOPEPTIDE TRANSPORTER 7, oligopeptide transporter 7 |
-0.56 | 0.32 | -0.29 | ||
88 | AT5G23860 | tubulin beta 8 | tubulin beta 8 | -0.56 | 0.33 | -0.31 | ||
89 | AT1G21360 | glycolipid transfer protein 2 | glycolipid transfer protein 2 | 0.56 | 0.32 | -0.36 | ||
90 | AT4G31980 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158), Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT5G11290.1); Has 1967 Blast hits to 1844 proteins in 183 species: Archae - 0; Bacteria - 6; Metazoa - 223; Fungi - 83; Plants - 1477; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink). |
0.56 | 0.33 | -0.32 | |||
91 | AT1G67800 | Copine (Calcium-dependent phospholipid-binding protein) family |
0.56 | 0.31 | -0.31 | |||
92 | AT1G61500 | S-locus lectin protein kinase family protein | -0.55 | 0.31 | -0.31 | |||
93 | AT4G11080 | HMG (high mobility group) box protein | 3xHigh Mobility Group-box1 | -0.55 | 0.3 | -0.3 | ||
94 | AT1G61240 | Protein of unknown function (DUF707) | -0.55 | 0.32 | -0.32 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
95 | C0016 | S-Adenosylmethionine | S-Adenosyl-L-methionine | S-Adenosyl-L-methionine | ethylene biosynthesis I (plants), scopoletin biosynthesis, quercetinsulphates biosynthesis, siroheme biosynthesis, gibberellin inactivation II (methylation), suberin biosynthesis, volatile benzenoid biosynthesis I (ester formation), S-adenosyl-L-methionine cycle II, methylhalides biosynthesis (plants), S-methylmethionine cycle, ubiquinol-9 biosynthesis (eukaryotic), nicotianamine biosynthesis, methionine biosynthesis II, spermine biosynthesis, choline biosynthesis II, diphthamide biosynthesis, homogalacturonan biosynthesis, phosphatidylcholine biosynthesis II, methylquercetin biosynthesis, plastoquinol biosynthesis, chlorophyllide a biosynthesis I, ferulate and sinapate biosynthesis, ubiquinol-10 biosynthesis (eukaryotic), phenylpropanoid biosynthesis, free phenylpropanoid acid biosynthesis, seleno-amino acid detoxification and volatilization I, plant sterol biosynthesis, lipoate biosynthesis and incorporation I, methyl indole-3-acetate interconversion, cyclopropane and cyclopropene fatty acid biosynthesis, spermidine biosynthesis I, thiamine biosynthesis II, methionine salvage pathway, spermidine hydroxycinnamic acid conjugates biosynthesis, simple coumarins biosynthesis, phosphatidylcholine biosynthesis IV, glutathione-mediated detoxification II, S-adenosyl-L-methionine biosynthesis, methionine degradation I (to homocysteine), phosphatidylcholine biosynthesis III, phylloquinol biosynthesis, choline biosynthesis I, biotin biosynthesis II, vitamin E biosynthesis |
-0.8 | 0.46 | -0.48 | ||
96 | C0253 | Threonic acid-1,4-lactone | D,L-Threonic acid-1,4-lactone | - | - | -0.72 | 0.47 | -0.45 | ||
97 | C0170 | MST_2128.3 | - | - | - | -0.7 | 0.43 | -0.47 | ||
98 | C0168 | MST_2023.2 | - | - | - | -0.67 | 0.47 | -0.43 | ||
99 | C0038 | 5-(Methylthio)pentylglucosinolate | - | 5-Methylthiopentylglucosinolate | glucosinolate biosynthesis from trihomomethionine | -0.66 | 0.44 | -0.47 | ||
100 | C0183 | MST_3033.1 | - | - | - | -0.66 | 0.47 | -0.46 | ||
101 | C0019 | 1-O-β-Glucopyranosylsinapic acid | 1-O-β-D-Glucopyranosylsinapic acid | - | phenylpropanoid pathwayl, lignin biosynthesis |
-0.63 | 0.45 | -0.43 |