AT2G13335 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT2G13335
Description transposable element gene
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G13335 transposable element gene 1 0.31 -0.31
2 AT3G43680 transposable element gene 0.71 0.32 -0.3
3 AT1G41900 transposable element gene -0.69 0.3 -0.3
4 AT2G07000 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.69 0.32 -0.29
5 AT3G47120 RNA recognition motif (RRM)-containing protein 0.67 0.32 -0.31
6 AT4G04300 transposable element gene 0.67 0.31 -0.31
7 AT2G06090 Plant self-incompatibility protein S1 family 0.67 0.32 -0.29
8 AT2G15700 transposable element gene -0.67 0.28 -0.32
9 AT3G20860 NIMA-related kinase 5 NIMA-related kinase 5,
NIMA-related kinase 5		 -0.65 0.33 -0.31
10 AT3G60120 beta glucosidase 27 beta glucosidase 27 0.65 0.33 -0.33
11 AT1G77810 Galactosyltransferase family protein 0.64 0.3 -0.33
12 AT2G22390 pseudogene, putative GTP-binding protein, similar to
GTP-binding protein GI:303738 from (Pisum sativum); blastp
match of 75% identity and 3.6e-56 P-value to
GP|303738|dbj|BAA02110.1||D12542 GTP-binding protein {Pisum
sativum}		 ATRABA4E, RAB GTPase homolog A4E -0.64 0.32 -0.32
13 AT4G01850 S-adenosylmethionine synthetase 2 AtSAM2, MAT2, S-adenosylmethionine
synthetase 2, S-ADENOSYLMETHIONINE
SYNTHETASE 2		 0.64 0.32 -0.31
14 AT3G11690 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G06380.1); Has 84 Blast
hits to 84 proteins in 12 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.64 0.31 -0.32
15 AT1G05360 BEST Arabidopsis thaliana protein match is: SNARE
associated Golgi protein family (TAIR:AT4G14950.1); Has 332
Blast hits to 326 proteins in 115 species: Archae - 0;
Bacteria - 11; Metazoa - 174; Fungi - 0; Plants - 74;
Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink).		 Killing Me Slowly 2 -0.63 0.31 -0.33
16 AT5G64710 Putative endonuclease or glycosyl hydrolase 0.63 0.3 -0.31
17 AT2G28070 ABC-2 type transporter family protein ATP-binding cassette G3 -0.63 0.3 -0.33
18 AT4G21130 Transducin/WD40 repeat-like superfamily protein EMBRYO DEFECTIVE 2271 0.63 0.32 -0.34
19 AT2G45580 cytochrome P450, family 76, subfamily C, polypeptide 3 cytochrome P450, family 76,
subfamily C, polypeptide 3		 0.63 0.32 -0.31
20 AT2G10920 unknown protein; Has 5 Blast hits to 5 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.63 0.31 -0.32
21 AT3G49050 alpha/beta-Hydrolases superfamily protein -0.62 0.31 -0.35
22 AT4G36280 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
family protein		 -0.62 0.31 -0.3
23 AT5G61650 CYCLIN P4;2 CYCP4, CYCLIN P4;2 0.62 0.3 -0.31
24 AT4G18860 unknown protein; Has 4 Blast hits to 4 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.61 0.29 -0.32
25 AT3G01580 Tetratricopeptide repeat (TPR)-like superfamily protein 0.61 0.32 -0.33
26 AT1G65210 Galactose-binding protein 0.61 0.31 -0.31
27 AT5G49410 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G73940.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.61 0.31 -0.32
28 AT5G64720 Protein of unknown function (DUF1278) -0.61 0.33 -0.34
29 AT2G46730 pseudogene, similar to 68 kDa protein, blastp match of 68%
identity and 4.7e-17 P-value to
GP|7271113|emb|CAB81547.1||AJ276420 68 kDa protein {Cicer
arietinum}		 -0.61 0.3 -0.31
30 AT1G74740 calcium-dependent protein kinase 30 ATCPK30, CALCIUM-DEPENDENT PROTEIN
KINASE 1A, calcium-dependent
protein kinase 30		 0.61 0.29 -0.29
31 AT2G16740 ubiquitin-conjugating enzyme 29 ubiquitin-conjugating enzyme 29 0.61 0.31 -0.32
32 AT2G36890 Duplicated homeodomain-like superfamily protein MYB DOMAIN PROTEIN 38, BLUE
INSENSITIVE TRAIT 1, MYB DOMAIN
PROTEIN 38, REGULATOR OF AXILLARY
MERISTEMS 2		 0.61 0.31 -0.3
33 AT3G47590 alpha/beta-Hydrolases superfamily protein 0.6 0.3 -0.32
34 AT1G21200 sequence-specific DNA binding transcription factors 0.6 0.31 -0.31
35 AT2G44830 Protein kinase superfamily protein -0.6 0.31 -0.31
36 AT5G38950 RmlC-like cupins superfamily protein -0.6 0.32 -0.32
37 AT3G29390 RS2-interacting KH protein RS2-interacting KH protein -0.59 0.3 -0.3
38 AT2G14630 transposable element gene -0.59 0.32 -0.33
39 AT1G74055 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED
DURING: 6 growth stages; Has 24 Blast hits to 24 proteins
in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.58 0.31 -0.34
40 AT4G35820 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.58 0.32 -0.29
41 AT1G57906 unknown protein; BEST Arabidopsis thaliana protein match
is: F-box family protein with a domain of unknown function
(DUF295) (TAIR:AT2G17690.1); Has 57 Blast hits to 57
proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.58 0.32 -0.31
42 AT3G51210 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.58 0.31 -0.32
43 AT5G11570 Major facilitator superfamily protein -0.58 0.34 -0.33
44 AT4G35550 WUSCHEL related homeobox 13 ATWOX13, HB-4, WUSCHEL related
homeobox 13		 -0.58 0.34 -0.31
45 AT5G46440 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; BEST Arabidopsis thaliana protein match is:
Pentatricopeptide repeat (PPR) superfamily protein
(TAIR:AT5G46460.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.58 0.32 -0.3
46 AT3G19040 histone acetyltransferase of the TAFII250 family 2 histone acetyltransferase of the
TAFII250 family 2, TBP-ASSOCIATED
FACTOR 1, TBP-ASSOCIATED FACTOR 1B		 -0.58 0.33 -0.3
47 AT5G21110 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.58 0.31 -0.32
48 AT1G46696 Protein of unknown function, DUF601 0.58 0.32 -0.32
49 AT5G64530 xylem NAC domain 1 Arabidopsis NAC domain containing
protein 104, xylem NAC domain 1		 -0.57 0.31 -0.33
50 AT3G28360 P-glycoprotein 16 ATP-binding cassette B16,
P-glycoprotein 16		 0.57 0.31 -0.33
51 AT3G03020 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 13 growth stages; Has 5 Blast hits to 5 proteins in
1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.57 0.31 -0.33
52 AT3G09130 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G42786.1); Has 7 Blast hits to
7 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.57 0.29 -0.32
53 AT3G46200 nudix hydrolase homolog 9 nudix hydrolase homolog 9, nudix
hydrolase homolog 9		 -0.57 0.32 -0.3
54 AT3G46750 unknown protein; Has 2631 Blast hits to 1984 proteins in
271 species: Archae - 6; Bacteria - 163; Metazoa - 1232;
Fungi - 253; Plants - 141; Viruses - 8; Other Eukaryotes -
828 (source: NCBI BLink).		 0.57 0.31 -0.34
55 AT3G53770 late embryogenesis abundant 3 (LEA3) family protein 0.56 0.3 -0.33
56 AT3G42120 transposable element gene 0.56 0.32 -0.3
57 AT5G45570 Ulp1 protease family protein -0.56 0.32 -0.32
58 AT5G59800 methyl-CPG-binding domain 7 ARABIDOPSIS THALIANA
METHYL-CPG-BINDING DOMAIN 7,
methyl-CPG-binding domain 7		 -0.56 0.32 -0.3
59 AT4G02460 DNA mismatch repair protein, putative POSTMEIOTIC SEGREGATION 1 -0.56 0.33 -0.32
60 AT2G26470 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF159 (InterPro:IPR003738); Has 3646
Blast hits to 3636 proteins in 1001 species: Archae - 41;
Bacteria - 1922; Metazoa - 142; Fungi - 125; Plants - 44;
Viruses - 14; Other Eukaryotes - 1358 (source: NCBI BLink).		 -0.56 0.34 -0.33
61 AT2G20330 Transducin/WD40 repeat-like superfamily protein 0.56 0.32 -0.3
62 AT3G44270 transposable element gene 0.56 0.32 -0.32
63 AT5G59040 copper transporter 3 copper transporter 3 -0.56 0.3 -0.31
64 AT3G59440 Calcium-binding EF-hand family protein 0.56 0.33 -0.3
65 AT2G46960 cytochrome P450, family 709, subfamily B, polypeptide 1 cytochrome P450, family 709,
subfamily B, polypeptide 1		 0.56 0.34 -0.29
66 AT1G54370 sodium hydrogen exchanger 5 NA+/H+ ANTIPORTER 5, sodium
hydrogen exchanger 5		 -0.56 0.33 -0.31
67 AT5G19710 BEST Arabidopsis thaliana protein match is: HPT
phosphotransmitter 4 (TAIR:AT3G16360.2); Has 1807 Blast
hits to 1807 proteins in 277 species: Archae - 0; Bacteria
- 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.56 0.33 -0.32
68 AT1G25270 nodulin MtN21 /EamA-like transporter family protein -0.56 0.31 -0.29
69 AT4G14380 unknown protein; Has 22 Blast hits to 22 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 1;
Plants - 18; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.55 0.32 -0.31
70 AT4G28430 Reticulon family protein -0.55 0.33 -0.32
71 AT5G02920 F-box/RNI-like superfamily protein -0.55 0.31 -0.32
72 AT1G51290 F-box and associated interaction domains-containing protein -0.55 0.32 -0.3
73 AT3G28430 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function FPL (InterPro:IPR019155); Has
243 Blast hits to 233 proteins in 101 species: Archae - 0;
Bacteria - 0; Metazoa - 110; Fungi - 0; Plants - 53;
Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink).		 -0.55 0.31 -0.3
74 AT4G17585 Aluminium activated malate transporter family protein -0.54 0.3 -0.31
75 AT1G17950 myb domain protein 52 MYB DOMAIN PROTEIN 52, BW52, myb
domain protein 52		 -0.54 0.33 -0.34
76 AT1G05310 Pectin lyase-like superfamily protein -0.54 0.29 -0.31
77 AT2G19290 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.53 0.35 -0.33
78 AT1G71696 carboxypeptidase D, putative SUPPRESSOR OF LLP1 1 -0.53 0.34 -0.33
79 AT4G08790 Nitrilase/cyanide hydratase and apolipoprotein
N-acyltransferase family protein		 -0.53 0.33 -0.33
80 AT1G14110 fucosyltransferase 9 ATFUT9, fucosyltransferase 9 -0.53 0.3 -0.31
81 AT5G16610 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.53 0.32 -0.29