AT2G20840 : -
Query Information
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AGICode AT2G20840
Description Secretory carrier membrane protein (SCAMP) family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G20840 Secretory carrier membrane protein (SCAMP) family protein 1 0.32 -0.29
2 AT1G09630 RAB GTPase 11C ARABIDOPSIS RAB GTPASE A2A, RAB
GTPase 11C, ARABIDOPSIS RAB GTPASE
A2A, RAB GTPASE A2A, RAB GTPase
11C		 0.77 0.3 -0.31
3 AT1G66390 myb domain protein 90 ATMYB90, myb domain protein 90,
PRODUCTION OF ANTHOCYANIN PIGMENT
2		 -0.73 0.33 -0.31
4 AT2G25760 Protein kinase family protein -0.73 0.34 -0.31
5 AT4G02020 SET domain-containing protein EZA1, SET DOMAIN-CONTAINING
PROTEIN 10, SWINGER		 -0.73 0.32 -0.32
6 AT3G02050 K+ uptake transporter 3 ARABIDOPSIS THALIANA POTASSIUM
TRANSPORTER 4, ATKUP3, K+ uptake
transporter 3		 -0.71 0.31 -0.29
7 AT2G39880 myb domain protein 25 myb domain protein 25, myb domain
protein 25		 0.71 0.3 -0.33
8 AT2G20810 galacturonosyltransferase 10 galacturonosyltransferase 10, LGT4 0.69 0.3 -0.31
9 AT4G31000 Calmodulin-binding protein -0.69 0.31 -0.31
10 AT4G30960 SOS3-interacting protein 3 CBL-INTERACTING PROTEIN KINASE 6,
CBL-INTERACTING PROTEIN KINASE 6,
SOS3-interacting protein 3,
SNF1-RELATED PROTEIN KINASE 3.14		 -0.68 0.31 -0.32
11 AT1G35200 60S ribosomal protein L4/L1 (RPL4B), pseudogene, similar to
60S ribosomal protein L4 (fragment) GB:P49691 from
(Arabidopsis thaliana); blastp match of 50% identity and
6.3e-17 P-value to SP|Q9XF97|RL4_PRUAR 60S ribosomal
protein L4 (L1). (Apricot) {Prunus armeniaca}		 -0.68 0.32 -0.31
12 AT1G15310 signal recognition particle 54 kDa subunit signal recognition particle 54 kDa
subunit, SIGNAL RECOGNITION
PARTICLE 54 KDA SUBUNIT		 -0.67 0.32 -0.31
13 AT2G41690 heat shock transcription factor B3 heat shock transcription factor
B3, HEAT SHOCK TRANSCRIPTION
FACTOR B3, heat shock
transcription factor B3		 -0.67 0.31 -0.31
14 AT4G14630 germin-like protein 9 germin-like protein 9 0.67 0.32 -0.33
15 AT5G06430 Thioredoxin superfamily protein 0.67 0.31 -0.33
16 AT2G23110 Late embryogenesis abundant protein, group 6 -0.67 0.3 -0.29
17 AT1G21050 Protein of unknown function, DUF617 0.67 0.31 -0.32
18 AT5G14240 Thioredoxin superfamily protein 0.66 0.32 -0.32
19 AT3G55005 tonneau 1b (TON1b) tonneau 1b 0.66 0.33 -0.32
20 AT5G46160 Ribosomal protein L14p/L23e family protein 0.66 0.33 -0.31
21 AT3G11500 Small nuclear ribonucleoprotein family protein 0.65 0.3 -0.31
22 AT3G13065 STRUBBELIG-receptor family 4 STRUBBELIG-receptor family 4 -0.65 0.29 -0.34
23 AT5G51180 alpha/beta-Hydrolases superfamily protein 0.65 0.29 -0.32
24 AT5G13100 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.65 0.33 -0.31
25 AT4G27090 Ribosomal protein L14 0.64 0.33 -0.3
26 AT3G20290 EPS15 homology domain 1 EPS15 homology domain 1, EPS15
homology domain 1		 -0.64 0.32 -0.31
27 AT4G22300 carboxylesterases SUPPRESSOR OF AVRBST-ELICITED
RESISTANCE 1		 0.63 0.31 -0.31
28 AT5G43890 Flavin-binding monooxygenase family protein SUPPRESSOR OF ER 1, YUCCA5 0.63 0.31 -0.33
29 AT5G59010 Protein kinase protein with tetratricopeptide repeat domain 0.63 0.31 -0.32
30 AT2G38320 TRICHOME BIREFRINGENCE-LIKE 34 TRICHOME BIREFRINGENCE-LIKE 34 0.63 0.31 -0.32
31 AT2G22270 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G39860.2); Has 247 Blast hits
to 231 proteins in 42 species: Archae - 0; Bacteria - 17;
Metazoa - 14; Fungi - 5; Plants - 145; Viruses - 0; Other
Eukaryotes - 66 (source: NCBI BLink).		 0.63 0.33 -0.32
32 AT2G42870 phy rapidly regulated 1 HELIX-LOOP-HELIX 1, PHY RAPIDLY
REGULATED 1		 0.63 0.33 -0.31
33 AT1G52740 histone H2A protein 9 histone H2A protein 9 0.63 0.34 -0.32
34 AT1G05790 lipase class 3 family protein -0.63 0.31 -0.32
35 AT3G61300 C2 calcium/lipid-binding plant phosphoribosyltransferase
family protein		 0.63 0.32 -0.35
36 AT5G59380 methyl-CPG-binding domain 6 ATMBD6, methyl-CPG-binding domain
6		 0.62 0.32 -0.32
37 AT3G21210 zinc ion binding -0.62 0.33 -0.31
38 AT4G04150 transposable element gene -0.62 0.34 -0.32
39 AT4G15840 BTB/POZ domain-containing protein -0.62 0.3 -0.33
40 AT5G58390 Peroxidase superfamily protein -0.61 0.32 -0.31
41 AT5G52040 RNA-binding (RRM/RBD/RNP motifs) family protein arginine/serine-rich splicing
factor 41, ATRSP41,
arginine/serine-rich splicing
factor 41		 0.61 0.33 -0.32
42 AT5G51400 PLAC8 family protein 0.61 0.31 -0.29
43 AT1G08750 Peptidase C13 family 0.61 0.31 -0.3
44 AT3G17090 Protein phosphatase 2C family protein 0.61 0.32 -0.33
45 AT3G60600 vesicle associated protein (AT)VAP, vesicle associated
protein, VAP27,
VAMP/SYNAPTOBREVIN-ASSOCIATED
PROTEIN 27-1		 0.6 0.3 -0.32
46 AT3G05210 nucleotide repair protein, putative ERCC1, UV REPAIR DEFICIENT 7 -0.6 0.31 -0.32
47 AT1G01950 armadillo repeat kinesin 2 armadillo repeat kinesin 2,
Arabidopsis thaliana KINESIN
Ungrouped clade, gene B		 0.6 0.3 -0.33
48 AT4G39420 unknown protein; Has 46 Blast hits to 40 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 44; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.59 0.31 -0.31
49 AT1G67720 Leucine-rich repeat protein kinase family protein -0.59 0.32 -0.3
50 AT3G27820 monodehydroascorbate reductase 4 MONODEHYDROASCORBATE REDUCTASE 4,
monodehydroascorbate reductase 4		 -0.59 0.31 -0.33
51 AT1G13920 Remorin family protein -0.59 0.3 -0.33
52 AT2G27900 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein
sorting-associated protein 54 (InterPro:IPR019515); Has 316
Blast hits to 252 proteins in 92 species: Archae - 0;
Bacteria - 2; Metazoa - 200; Fungi - 2; Plants - 68;
Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).		 -0.58 0.3 -0.34
53 AT5G58510 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 14 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G55060.2); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.57 0.3 -0.31
54 AT5G17980 C2 calcium/lipid-binding plant phosphoribosyltransferase
family protein		 -0.57 0.32 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
55 C0228 Ribose-5-phosphate D-Ribose-5-phosphate D-Ribose-5-phosphate PRPP biosynthesis I,
Calvin-Benson-Bassham cycle,
trans-zeatin biosynthesis,
pentose phosphate pathway (non-oxidative branch),
pyridine nucleotide cycling (plants),
Rubisco shunt,
ribose degradation,
pyridoxal 5'-phosphate biosynthesis II 		0.82 0.46 -0.4 C0228
56 C0145 Maltotetraose - Maltotetraose starch degradation II -0.73 0.45 -0.46 C0145
57 C0105 Glutathione disulfide - Glutathione disulfide sulfate reduction II (assimilatory),
selenate reduction,
glutathione redox reactions I,
ascorbate glutathione cycle,
glutathione redox reactions II 		-0.7 0.44 -0.43 C0105