AT2G15720 : -
Query Information
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AGICode AT2G15720
Description transposable element gene
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G15720 transposable element gene 1 0.33 -0.3
2 AT3G47800 Galactose mutarotase-like superfamily protein -0.72 0.34 -0.33
3 AT3G04020 unknown protein; Has 26 Blast hits to 25 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 23; Viruses - 0; Other Eukaryotes - 3 (source:
NCBI BLink).		 -0.72 0.34 -0.3
4 AT3G59270 FBD-like domain family protein 0.71 0.31 -0.32
5 AT3G04220 Disease resistance protein (TIR-NBS-LRR class) family 0.71 0.3 -0.31
6 AT2G04830 Protein of unknown function (DUF295) 0.69 0.34 -0.31
7 AT2G38650 galacturonosyltransferase 7 galacturonosyltransferase 7, LIKE
GLYCOSYL TRANSFERASE 7		 0.68 0.31 -0.31
8 AT1G33990 methyl esterase 14 METHYL ESTERASE 14, methyl
esterase 14		 -0.68 0.32 -0.3
9 AT1G14720 xyloglucan endotransglucosylase/hydrolase 28 ATXTH28, ENDOXYLOGLUCAN
TRANSFERASE A2, xyloglucan
endotransglucosylase/hydrolase 28,
xyloglucan endotransglycosylase
related 2		 -0.68 0.33 -0.32
10 AT1G77300 histone methyltransferases(H3-K4 specific);histone
methyltransferases(H3-K36 specific)		 ASH1 HOMOLOG 2, CAROTENOID
CHLOROPLAST REGULATORY1, EARLY
FLOWERING IN SHORT DAYS, LAZARUS
2, SET DOMAIN GROUP 8		 0.68 0.32 -0.32
11 AT1G12720 transposable element gene 0.68 0.32 -0.31
12 AT4G36105 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
nucleus; EXPRESSED IN: 6 plant structures; EXPRESSED
DURING: LP.04 four leaves visible, 4 anthesis, petal
differentiation and expansion stage; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G17990.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.67 0.3 -0.32
13 AT1G18290 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
chloroplast; EXPRESSED IN: root; Has 94 Blast hits to 94
proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.66 0.31 -0.29
14 AT3G12810 SNF2 domain-containing protein / helicase domain-containing
protein		 chr13, PHOTOPERIOD-INDEPENDENT
EARLY FLOWERING 1, SRCAP		 0.66 0.32 -0.33
15 AT1G31810 Formin Homology 14 Formin Homology 14 0.66 0.3 -0.32
16 AT3G22350 F-box and associated interaction domains-containing protein 0.66 0.28 -0.32
17 AT1G64790 ILITYHIA ILITYHIA 0.65 0.31 -0.29
18 AT5G12120 Ubiquitin-associated/translation elongation factor EF1B
protein		 -0.65 0.33 -0.31
19 AT1G48090 calcium-dependent lipid-binding family protein 0.65 0.3 -0.31
20 AT1G69170 Squamosa promoter-binding protein-like (SBP domain)
transcription factor family protein		 0.64 0.29 -0.31
21 AT5G24240 Phosphatidylinositol 3- and 4-kinase ;Ubiquitin family
protein		 -0.64 0.31 -0.34
22 AT2G16870 Disease resistance protein (TIR-NBS-LRR class) family -0.64 0.32 -0.3
23 AT5G27050 AGAMOUS-like 101 AGAMOUS-like 101 0.63 0.32 -0.34
24 AT2G30620 winged-helix DNA-binding transcription factor family
protein		 -0.63 0.32 -0.31
25 AT4G10510 Subtilase family protein 0.63 0.32 -0.33
26 AT1G28640 GDSL-like Lipase/Acylhydrolase superfamily protein 0.63 0.3 -0.32
27 AT3G59810 Small nuclear ribonucleoprotein family protein -0.63 0.32 -0.32
28 AT5G58003 C-terminal domain phosphatase-like 4 C-terminal domain phosphatase-like
4		 -0.63 0.33 -0.34
29 AT1G75550 glycine-rich protein 0.63 0.32 -0.34
30 AT5G53635 F-box/RNI-like/FBD-like domains-containing protein 0.63 0.31 -0.32
31 AT1G42460 transposable element gene 0.62 0.31 -0.3
32 AT3G03980 NAD(P)-binding Rossmann-fold superfamily protein -0.62 0.3 -0.3
33 AT5G44470 BEST Arabidopsis thaliana protein match is: Polynucleotidyl
transferase, ribonuclease H-like superfamily protein
(TAIR:AT3G23320.1); Has 74 Blast hits to 74 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.62 0.32 -0.29
34 AT2G44360 unknown protein; Has 23 Blast hits to 23 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.62 0.34 -0.31
35 AT1G80930 MIF4G domain-containing protein / MA3 domain-containing
protein		 0.62 0.31 -0.34
36 AT5G13390 no exine formation 1 NO EXINE FORMATION 1 0.61 0.31 -0.3
37 AT5G44200 CAP-binding protein 20 ATCBP20, CAP-binding protein 20 -0.61 0.29 -0.31
38 AT2G38870 Serine protease inhibitor, potato inhibitor I-type family
protein		 -0.61 0.32 -0.31
39 AT1G22885 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 15 Blast hits to 15
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.61 0.31 -0.31
40 AT4G13020 Protein kinase superfamily protein MHK 0.61 0.34 -0.32
41 AT2G45540 WD-40 repeat family protein / beige-related 0.6 0.32 -0.32
42 AT5G03970 F-box associated ubiquitination effector family protein -0.6 0.3 -0.32
43 AT5G16650 Chaperone DnaJ-domain superfamily protein -0.6 0.31 -0.31
44 AT3G29190 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 -0.6 0.32 -0.31
45 AT3G45810 ferric reductase-like transmembrane component family
protein		 0.6 0.33 -0.3
46 AT4G36620 GATA transcription factor 19 GATA transcription factor 19,
hanaba taranu like 2		 0.6 0.3 -0.32
47 AT1G10520 DNA polymerase lambda (POLL) AtPol{lambda}, DNA polymerase
{lambda}		 -0.6 0.32 -0.31
48 AT2G36980 Tetratricopeptide repeat (TPR)-like superfamily protein 0.59 0.32 -0.33
49 AT5G12100 pentatricopeptide (PPR) repeat-containing protein 0.59 0.32 -0.32
50 AT3G42350 transposable element gene 0.59 0.31 -0.32
51 AT3G08700 ubiquitin-conjugating enzyme 12 ubiquitin-conjugating enzyme 12 0.59 0.31 -0.3
52 AT2G35630 ARM repeat superfamily protein GEM1, MICROTUBULE ORGANIZATION 1 0.59 0.34 -0.3
53 AT3G55030 phosphatidylglycerolphosphate synthase 2 phosphatidylglycerolphosphate
synthase 2		 -0.59 0.32 -0.29
54 AT1G17350 NADH:ubiquinone oxidoreductase intermediate-associated
protein 30		 -0.59 0.31 -0.29
55 AT4G27850 Glycine-rich protein family 0.59 0.33 -0.28
56 AT3G15355 ubiquitin-conjugating enzyme 25 PHO2 FAMILY UBIQUITIN CONJUGATION
ENZYME 1, ubiquitin-conjugating
enzyme 25		 -0.58 0.32 -0.34
57 AT2G45880 beta-amylase 7 beta-amylase 7, BETA-AMYLASE 4 -0.58 0.3 -0.32
58 AT2G44590 DYNAMIN-like 1D DYNAMIN-like 1D, DYNAMIN-like 1D 0.58 0.32 -0.31
59 AT5G51800 Protein kinase superfamily protein -0.58 0.32 -0.32
60 AT5G54350 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast; BEST
Arabidopsis thaliana protein match is: C2H2-like zinc
finger protein (TAIR:AT5G54360.1); Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.58 0.34 -0.32
61 AT1G07980 nuclear factor Y, subunit C10 nuclear factor Y, subunit C10 -0.58 0.32 -0.32
62 AT1G71820 SEC6 SEC6 0.58 0.32 -0.31
63 AT5G65590 Dof-type zinc finger DNA-binding family protein -0.58 0.31 -0.31
64 AT5G25990 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast; BEST
Arabidopsis thaliana protein match is: Core-2/I-branching
beta-1,6-N-acetylglucosaminyltransferase family protein
(TAIR:AT5G25970.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.58 0.3 -0.31
65 AT1G55940 cytochrome P450, family 708, subfamily A, polypeptide 1 cytochrome P450, family 708,
subfamily A, polypeptide 1		 0.58 0.32 -0.32
66 AT3G20040 Hexokinase ATHXK4, HEXOKINASE-LIKE 2 0.58 0.31 -0.32
67 AT3G47630 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Mitochondrial matrix Mmp37 (InterPro:IPR015222); Has 325
Blast hits to 325 proteins in 172 species: Archae - 0;
Bacteria - 0; Metazoa - 109; Fungi - 140; Plants - 43;
Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink).		 -0.58 0.31 -0.31
68 AT2G16600 rotamase CYP 3 rotamase CYP 3 -0.58 0.32 -0.32
69 AT5G06190 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G58540.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.58 0.31 -0.32
70 AT5G09920 RNA polymerase II, Rpb4, core protein ATRPB15.9, NRPB4, RPB15.9,
RPB15.9.9		 -0.58 0.31 -0.32
71 AT3G61530 Phosphoenolpyruvate carboxylase family protein PANB2 -0.58 0.31 -0.32
72 AT3G43100 transposable element gene 0.57 0.3 -0.32
73 AT2G29340 NAD-dependent epimerase/dehydratase family protein -0.57 0.32 -0.32
74 AT5G43900 myosin 2 ARABIDOPSIS MYOSIN 2, myosin 2,
MYOSIN X1 2, MYOSIN XI-6		 0.57 0.32 -0.33
75 AT4G37340 cytochrome P450, family 81, subfamily D, polypeptide 3 cytochrome P450, family 81,
subfamily D, polypeptide 3		 0.57 0.32 -0.32
76 AT5G22380 NAC domain containing protein 90 NAC domain containing protein 90,
NAC domain containing protein 90		 0.57 0.32 -0.31
77 AT5G28280 pseudogene, sterol desaturase domain-containing protein,
CER1-like, A.thaliana, ATCER1L19; blastp match of 55%
identity and 8.9e-22 P-value to
GP|4769012|gb|AAD29719.1|AF143746_1|AF143746 CER1 {Oryza
sativa}		 -0.57 0.35 -0.32
78 AT4G24240 WRKY DNA-binding protein 7 ATWRKY7, WRKY DNA-binding protein
7		 -0.57 0.3 -0.33
79 AT5G65930 kinesin-like calmodulin-binding protein (ZWICHEL) KINESIN-LIKE CALMODULIN-BINDING
PROTEIN, POTATO KINESIN-LIKE
CALMODULIN-BINDING PROTEIN,
ZWICHEL		 0.57 0.32 -0.31
80 AT1G14340 RNA-binding (RRM/RBD/RNP motifs) family protein -0.57 0.33 -0.32
81 AT2G43350 glutathione peroxidase 3 glutathione peroxidase 3,
glutathione peroxidase 3		 -0.57 0.32 -0.32
82 AT5G49050 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
response to stress; LOCATED IN: cellular_component unknown;
CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016),
Rossmann-like alpha/beta/alpha sandwich fold
(InterPro:IPR014729); BEST Arabidopsis thaliana protein
match is: Adenine nucleotide alpha hydrolases-like
superfamily protein (TAIR:AT2G47710.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.57 0.34 -0.32
83 AT3G61860 RNA-binding (RRM/RBD/RNP motifs) family protein arginine/serine-rich splicing
factor 31, arginine/serine-rich
splicing factor 31,
arginine/serine-rich splicing
factor 31, arginine/serine-rich
splicing factor 31		 -0.57 0.33 -0.31
84 AT2G30590 WRKY DNA-binding protein 21 WRKY DNA-binding protein 21 -0.57 0.32 -0.31
85 AT4G27750 binding IMPAIRED SUCROSE INDUCTION 1 -0.57 0.3 -0.31
86 AT3G48490 unknown protein; Has 16 Blast hits to 16 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 1;
Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.57 0.33 -0.3
87 AT5G65560 Pentatricopeptide repeat (PPR) superfamily protein 0.56 0.33 -0.31
88 AT1G48360 zinc ion binding;nucleic acid binding;hydrolases, acting on
acid anhydrides, in phosphorus-containing anhydrides		 0.56 0.3 -0.32
89 AT1G80860 phospholipid N-methyltransferase ARABIDOPSIS PHOSPHOLIPID
N-METHYLTRANSFERASE, phospholipid
N-methyltransferase		 -0.56 0.33 -0.31
90 AT4G10280 RmlC-like cupins superfamily protein -0.56 0.32 -0.32
91 AT1G08600 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ATRX, CHR20 0.56 0.34 -0.3
92 AT5G47830 unknown protein; Has 35333 Blast hits to 34131 proteins in
2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink).		 -0.56 0.31 -0.3
93 AT1G31812 acyl-CoA-binding protein 6 ACYL-COA-BINDING PROTEIN,
acyl-CoA-binding protein 6		 -0.56 0.32 -0.33
94 AT5G35160 Endomembrane protein 70 protein family 0.56 0.31 -0.31
95 AT4G26400 RING/U-box superfamily protein -0.56 0.3 -0.32
96 AT2G36485 ENTH/VHS family protein -0.56 0.33 -0.33
97 AT5G56070 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G56050.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.56 0.31 -0.31
98 AT3G60860 SEC7-like guanine nucleotide exchange family protein 0.56 0.31 -0.31
99 AT3G30240 transposable element gene -0.55 0.32 -0.32
100 AT1G14820 Sec14p-like phosphatidylinositol transfer family protein -0.55 0.3 -0.32
101 AT3G21780 UDP-glucosyl transferase 71B6 UDP-glucosyl transferase 71B6 -0.55 0.31 -0.32
102 AT3G60200 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G44600.1); Has 60 Blast hits
to 60 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 8; Fungi - 0; Plants - 51; Viruses - 0; Other
Eukaryotes - 1 (source: NCBI BLink).		 -0.55 0.33 -0.31
103 AT3G23460 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.55 0.31 -0.32
104 AT2G07505 zinc ion binding -0.55 0.32 -0.32
105 AT3G21280 ubiquitin-specific protease 7 ubiquitin-specific protease 7 -0.54 0.31 -0.31
106 AT3G24260 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
CONTAINS InterPro DOMAIN/s: Histone deacetylase interacting
(InterPro:IPR013194); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G28870.1); Has 220 Blast
hits to 218 proteins in 65 species: Archae - 7; Bacteria -
6; Metazoa - 43; Fungi - 2; Plants - 115; Viruses - 0;
Other Eukaryotes - 47 (source: NCBI BLink).		 -0.54 0.31 -0.3
107 AT3G09310 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF37 (InterPro:IPR002696); Has 5781 Blast
hits to 5781 proteins in 1903 species: Archae - 0; Bacteria
- 3956; Metazoa - 2; Fungi - 0; Plants - 42; Viruses - 3;
Other Eukaryotes - 1778 (source: NCBI BLink).		 -0.54 0.29 -0.35
108 AT4G15090 FRS (FAR1 Related Sequences) transcription factor family FAR-RED IMPAIRED RESPONSE 1 -0.54 0.3 -0.3
109 AT1G49980 DNA/RNA polymerases superfamily protein -0.54 0.32 -0.31
110 AT1G24240 Ribosomal protein L19 family protein -0.53 0.32 -0.34
111 AT1G09575 Protein of unknown function (DUF607) -0.53 0.32 -0.3
112 AT3G10330 Cyclin-like family protein -0.53 0.31 -0.31
113 AT5G48720 x-ray induced transcript 1 X-RAY INDUCED TRANSCRIPT, X-RAY
INDUCED TRANSCRIPT 1		 -0.53 0.33 -0.31
114 AT3G17590 transcription regulatory protein SNF5, putative (BSH) BUSHY GROWTH, CHE1 -0.53 0.29 -0.33
115 AT5G23405 HMG-box (high mobility group) DNA-binding family protein -0.53 0.32 -0.3
116 AT5G35280 transposable element gene -0.53 0.33 -0.34
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
117 C0233 Sinapinic acid - cis-Sinapinate; Sinapate ferulate and sinapate biosynthesis,
sinapate ester biosynthesis,
free phenylpropanoid acid biosynthesis 		0.71 0.43 -0.41 C0233
118 C0016 S-Adenosylmethionine S-Adenosyl-L-methionine S-Adenosyl-L-methionine ethylene biosynthesis I (plants),
scopoletin biosynthesis,
quercetinsulphates biosynthesis,
siroheme biosynthesis,
gibberellin inactivation II (methylation),
suberin biosynthesis,
volatile benzenoid biosynthesis I (ester formation),
S-adenosyl-L-methionine cycle II,
methylhalides biosynthesis (plants),
S-methylmethionine cycle,
ubiquinol-9 biosynthesis (eukaryotic),
nicotianamine biosynthesis,
methionine biosynthesis II,
spermine biosynthesis,
choline biosynthesis II,
diphthamide biosynthesis,
homogalacturonan biosynthesis,
phosphatidylcholine biosynthesis II,
methylquercetin biosynthesis,
plastoquinol biosynthesis,
chlorophyllide a biosynthesis I,
ferulate and sinapate biosynthesis,
ubiquinol-10 biosynthesis (eukaryotic),
phenylpropanoid biosynthesis,
free phenylpropanoid acid biosynthesis,
seleno-amino acid detoxification and volatilization I,
plant sterol biosynthesis,
lipoate biosynthesis and incorporation I,
methyl indole-3-acetate interconversion,
cyclopropane and cyclopropene fatty acid biosynthesis,
spermidine biosynthesis I,
thiamine biosynthesis II,
methionine salvage pathway,
spermidine hydroxycinnamic acid conjugates biosynthesis,
simple coumarins biosynthesis,
phosphatidylcholine biosynthesis IV,
glutathione-mediated detoxification II,
S-adenosyl-L-methionine biosynthesis,
methionine degradation I (to homocysteine),
phosphatidylcholine biosynthesis III,
phylloquinol biosynthesis,
choline biosynthesis I,
biotin biosynthesis II,
vitamin E biosynthesis 		0.68 0.41 -0.43 C0016
119 C0082 Digalactosyldiacylglycerol-36:3 - Digalactosyldiacylglycerol-36:3 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		0.66 0.54 -0.47 C0082