AGICode | AT2G15500 |
Description | RNA-binding protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT2G15500 | RNA-binding protein | 1 | 0.3 | -0.32 | |||
2 | AT3G51500 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 23 Blast hits to 23 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.67 | 0.3 | -0.32 | |||
3 | AT1G32450 | nitrate transporter 1.5 | nitrate transporter 1.5 | -0.67 | 0.31 | -0.31 | ||
4 | AT3G22940 | F-box associated ubiquitination effector family protein | 0.66 | 0.32 | -0.29 | |||
5 | AT2G46070 | mitogen-activated protein kinase 12 | ATMPK12, MAPK12, mitogen-activated protein kinase 12 |
0.65 | 0.3 | -0.32 | ||
6 | AT2G11650 | transposable element gene | -0.65 | 0.31 | -0.3 | |||
7 | AT3G20730 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.65 | 0.33 | -0.33 | |||
8 | AT1G29680 | Protein of unknown function (DUF1264) | 0.65 | 0.31 | -0.32 | |||
9 | AT1G21860 | SKU5 similar 7 | SKU5 similar 7 | -0.65 | 0.33 | -0.33 | ||
10 | AT1G77820 | transposable element gene | -0.64 | 0.34 | -0.3 | |||
11 | AT1G69210 | Uncharacterised protein family UPF0090 | -0.64 | 0.32 | -0.33 | |||
12 | AT3G57680 | Peptidase S41 family protein | 0.63 | 0.31 | -0.31 | |||
13 | AT5G60740 | ABC transporter family protein | ATP-binding cassette G28 | 0.63 | 0.3 | -0.32 | ||
14 | AT5G59600 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.62 | 0.31 | -0.3 | |||
15 | AT1G63030 | Integrase-type DNA-binding superfamily protein | DWARF AND DELAYED FLOWERING 2 | 0.62 | 0.31 | -0.3 | ||
16 | AT2G31210 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
0.62 | 0.32 | -0.32 | |||
17 | AT2G46600 | Calcium-binding EF-hand family protein | 0.61 | 0.3 | -0.31 | |||
18 | AT3G23680 | F-box associated ubiquitination effector family protein | 0.61 | 0.3 | -0.32 | |||
19 | AT1G46336 | unknown protein; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.61 | 0.32 | -0.34 | |||
20 | ATCG00065 | ribosomal protein S12A | RIBOSOMAL PROTEIN S12, ribosomal protein S12A |
0.6 | 0.31 | -0.33 | ||
21 | AT4G13070 | RNA-binding CRS1 / YhbY (CRM) domain protein | -0.6 | 0.3 | -0.31 | |||
22 | AT1G49190 | response regulator 19 | response regulator 19, response regulator 19 |
-0.6 | 0.31 | -0.31 | ||
23 | AT1G26350 | unknown protein; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.59 | 0.31 | -0.3 | |||
24 | AT4G30660 | Low temperature and salt responsive protein family | 0.59 | 0.31 | -0.32 | |||
25 | AT5G40940 | putative fasciclin-like arabinogalactan protein 20 | putative fasciclin-like arabinogalactan protein 20 |
-0.59 | 0.29 | -0.32 | ||
26 | AT3G45860 | cysteine-rich RLK (RECEPTOR-like protein kinase) 4 | cysteine-rich RLK (RECEPTOR-like protein kinase) 4 |
0.59 | 0.32 | -0.32 | ||
27 | AT3G29660 | transposable element gene | 0.59 | 0.31 | -0.32 | |||
28 | AT3G50190 | Plant protein of unknown function (DUF247) | -0.58 | 0.33 | -0.33 | |||
29 | AT5G38340 | Disease resistance protein (TIR-NBS-LRR class) family | -0.58 | 0.31 | -0.3 | |||
30 | AT1G58190 | receptor like protein 9 | receptor like protein 9, receptor like protein 9 |
-0.58 | 0.32 | -0.32 | ||
31 | AT1G25360 | Pentatricopeptide repeat (PPR) superfamily protein | -0.58 | 0.31 | -0.34 | |||
32 | AT1G66120 | AMP-dependent synthetase and ligase family protein | -0.58 | 0.33 | -0.3 | |||
33 | AT5G11820 | Plant self-incompatibility protein S1 family | 0.58 | 0.31 | -0.3 | |||
34 | AT2G40935 | PLAC8 family protein | 0.58 | 0.3 | -0.3 | |||
35 | AT5G02350 | Cysteine/Histidine-rich C1 domain family protein | -0.57 | 0.32 | -0.31 | |||
36 | AT5G59050 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G54000.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). |
0.57 | 0.3 | -0.3 | |||
37 | AT2G19070 | spermidine hydroxycinnamoyl transferase | spermidine hydroxycinnamoyl transferase |
-0.57 | 0.32 | -0.31 | ||
38 | AT5G08230 | Tudor/PWWP/MBT domain-containing protein | 0.57 | 0.32 | -0.32 | |||
39 | AT2G17860 | Pathogenesis-related thaumatin superfamily protein | -0.57 | 0.33 | -0.34 | |||
40 | AT2G32410 | AXR1-like | AXR1-like, AXR1- like 1 | 0.57 | 0.32 | -0.32 | ||
41 | ATCG00500 | acetyl-CoA carboxylase carboxyl transferase subunit beta | acetyl-CoA carboxylase carboxyl transferase subunit beta |
0.57 | 0.32 | -0.31 | ||
42 | AT1G50340 | Plant invertase/pectin methylesterase inhibitor superfamily protein |
-0.57 | 0.31 | -0.33 | |||
43 | AT1G37000 | Beta-galactosidase related protein | 0.56 | 0.33 | -0.31 | |||
44 | AT2G37810 | Cysteine/Histidine-rich C1 domain family protein | -0.56 | 0.31 | -0.3 | |||
45 | AT1G44935 | transposable element gene | sadhu non-coding retrotransposon 9-1 |
0.56 | 0.33 | -0.31 | ||
46 | AT1G75800 | Pathogenesis-related thaumatin superfamily protein | 0.56 | 0.31 | -0.33 | |||
47 | AT1G66110 | Family of unknown function (DUF577) | -0.55 | 0.33 | -0.31 | |||
48 | AT1G32610 | hydroxyproline-rich glycoprotein family protein | -0.55 | 0.32 | -0.32 | |||
49 | AT2G04020 | GDSL-like Lipase/Acylhydrolase superfamily protein | 0.55 | 0.3 | -0.31 | |||
50 | AT3G29100 | vesicle transport V-snare 13 | ATVTI13, vesicle transport V-snare 13 |
0.55 | 0.32 | -0.31 | ||
51 | AT4G33020 | ZIP metal ion transporter family | ATZIP9, ZIP9 | 0.55 | 0.31 | -0.32 | ||
52 | AT1G43900 | Protein phosphatase 2C family protein | -0.55 | 0.31 | -0.3 | |||
53 | AT2G04600 | transposable element gene | -0.55 | 0.34 | -0.3 | |||
54 | AT4G07810 | transposable element gene | 0.54 | 0.31 | -0.33 | |||
55 | AT4G36440 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 41 Blast hits to 41 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.54 | 0.32 | -0.3 | |||
56 | AT1G17470 | developmentally regulated G-protein 1 | ATDRG, developmentally regulated G-protein 1, developmentally regulated G-protein 1 |
-0.54 | 0.32 | -0.33 | ||
57 | AT1G31814 | FRIGIDA like 2 | FRIGIDA like 2 | -0.54 | 0.33 | -0.32 | ||
58 | AT4G28130 | diacylglycerol kinase 6 | ATDGK6, diacylglycerol kinase 6 | 0.54 | 0.3 | -0.33 | ||
59 | AT4G08560 | pumilio 15 | pumilio 15, pumilio 15 | 0.53 | 0.31 | -0.3 | ||
60 | AT1G74420 | fucosyltransferase 3 | ATFUT3, fucosyltransferase 3 | 0.53 | 0.32 | -0.31 | ||
61 | AT3G29610 | transposable element gene | 0.53 | 0.31 | -0.32 | |||
62 | AT2G05170 | vacuolar protein sorting 11 | vacuolar protein sorting 11, vacuolar protein sorting 11 |
-0.53 | 0.32 | -0.31 | ||
63 | AT3G21370 | beta glucosidase 19 | beta glucosidase 19 | 0.53 | 0.31 | -0.31 | ||
64 | AT3G21850 | SKP1-like 9 | SKP1-like 9, SKP1-like 9 | -0.53 | 0.33 | -0.31 | ||
65 | AT5G35150 | transposable element gene | -0.53 | 0.33 | -0.3 | |||
66 | AT1G31520 | unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.52 | 0.31 | -0.31 | |||
67 | AT5G40645 | RPM1-interacting protein 4 (RIN4) family protein | -0.52 | 0.32 | -0.34 | |||
68 | AT5G37730 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.52 | 0.3 | -0.31 | |||
69 | AT3G22920 | Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein |
0.52 | 0.33 | -0.32 | |||
70 | AT5G08360 | Protein of unknown function (DUF789) | -0.52 | 0.3 | -0.33 | |||
71 | AT1G71691 | GDSL-like Lipase/Acylhydrolase superfamily protein | 0.52 | 0.3 | -0.31 | |||
72 | AT1G50990 | Protein kinase protein with tetratricopeptide repeat domain | -0.51 | 0.31 | -0.34 | |||
73 | AT4G18330 | Translation elongation factor EF1A/initiation factor IF2gamma family protein |
0.51 | 0.32 | -0.32 | |||
74 | AT4G29650 | Cytidine/deoxycytidylate deaminase family protein | -0.51 | 0.31 | -0.33 | |||
75 | AT3G61360 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.51 | 0.32 | -0.32 | |||
76 | AT1G33910 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.51 | 0.33 | -0.31 | |||
77 | AT5G66660 | Protein of unknown function (DUF677) | -0.51 | 0.34 | -0.31 | |||
78 | AT1G34580 | Major facilitator superfamily protein | 0.51 | 0.29 | -0.32 |