AT2G15520 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT2G15520
Description transposable element gene
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G15520 transposable element gene 1 0.32 -0.31
2 AT2G15042 Leucine-rich repeat (LRR) family protein 0.77 0.3 -0.33
3 AT1G76020 Thioredoxin superfamily protein 0.7 0.31 -0.29
4 AT1G35220 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 313
Blast hits to 185 proteins in 75 species: Archae - 0;
Bacteria - 0; Metazoa - 200; Fungi - 0; Plants - 67;
Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink).		 -0.7 0.32 -0.3
5 AT4G39200 Ribosomal protein S25 family protein -0.68 0.34 -0.31
6 AT1G24735 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.68 0.32 -0.31
7 AT5G44880 transposable element gene 0.67 0.34 -0.32
8 AT5G15480 C2H2-type zinc finger family protein 0.66 0.31 -0.34
9 AT4G02630 Protein kinase superfamily protein 0.66 0.32 -0.31
10 AT1G64290 F-box protein-related 0.65 0.3 -0.33
11 AT3G58090 Disease resistance-responsive (dirigent-like protein)
family protein		 0.65 0.29 -0.31
12 AT2G03880 Pentatricopeptide repeat (PPR) superfamily protein required for efficiency of
mitochondrial editing 1		 -0.65 0.31 -0.33
13 AT2G15080 receptor like protein 19 receptor like protein 19, receptor
like protein 19		 0.64 0.34 -0.31
14 AT1G75660 5'-3' exoribonuclease 3 5'-3' EXORIBONUCLEASE 3, 5'-3'
exoribonuclease 3		 -0.64 0.33 -0.3
15 AT4G14130 xyloglucan endotransglucosylase/hydrolase 15 xyloglucan
endotransglucosylase/hydrolase 15,
xyloglucan endotransglycosylase 7		 -0.63 0.3 -0.31
16 AT2G28660 Chloroplast-targeted copper chaperone protein -0.63 0.3 -0.32
17 AT2G20770 GCR2-like 2 GCR2-like 2 0.63 0.32 -0.34
18 AT3G42710 transposable element gene -0.63 0.32 -0.32
19 AT3G43940 unknown protein; Has 24 Blast hits to 24 proteins in 4
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.62 0.32 -0.34
20 AT3G48650 pseudogene, At14a-related protein, similar to At14a
(GI:11994571 and GI:11994573) (Arabidopsis thaliana)		 0.62 0.31 -0.33
21 AT1G75410 BEL1-like homeodomain 3 BEL1-like homeodomain 3 0.62 0.33 -0.29
22 AT4G23780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G23770.1); Has 51 Blast hits
to 49 proteins in 22 species: Archae - 0; Bacteria - 9;
Metazoa - 12; Fungi - 0; Plants - 14; Viruses - 2; Other
Eukaryotes - 14 (source: NCBI BLink).		 0.62 0.3 -0.31
23 AT4G39520 GTP-binding protein-related -0.62 0.31 -0.33
24 AT4G26390 Pyruvate kinase family protein 0.61 0.32 -0.3
25 AT1G75580 SAUR-like auxin-responsive protein family -0.61 0.32 -0.3
26 ATCG00680 photosystem II reaction center protein B photosystem II reaction center
protein B		 0.61 0.34 -0.31
27 AT5G18360 Disease resistance protein (TIR-NBS-LRR class) family 0.61 0.32 -0.32
28 AT1G10950 transmembrane nine 1 AtTMN1, transmembrane nine 1 -0.61 0.3 -0.3
29 AT1G17800 early nodulin-like protein 22 AtENODL22, early nodulin-like
protein 22		 0.6 0.31 -0.31
30 AT2G37310 Pentatricopeptide repeat (PPR) superfamily protein -0.6 0.33 -0.31
31 AT1G56710 Pectin lyase-like superfamily protein 0.6 0.31 -0.32
32 ATCG00150 ATPase, F0 complex, subunit A protein ATPI 0.6 0.32 -0.3
33 AT1G51590 alpha-mannosidase 1 ALPHA-MANNOSIDASE IB,
alpha-mannosidase 1		 -0.6 0.32 -0.3
34 AT5G03670 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G36420.1); Has 700 Blast hits
to 624 proteins in 104 species: Archae - 0; Bacteria - 18;
Metazoa - 333; Fungi - 60; Plants - 73; Viruses - 24; Other
Eukaryotes - 192 (source: NCBI BLink).		 -0.6 0.32 -0.33
35 AT1G44830 Integrase-type DNA-binding superfamily protein -0.6 0.31 -0.31
36 AT1G02120 GRAM domain family protein VASCULAR ASSOCIATED DEATH1 0.6 0.29 -0.3
37 AT2G44270 repressor of lrx1 repressor of lrx1 -0.6 0.33 -0.31
38 AT2G33340 MOS4-associated complex 3B MOS4-associated complex 3B -0.6 0.33 -0.32
39 AT5G25860 F-box/RNI-like superfamily protein 0.6 0.32 -0.3
40 AT1G02450 NIM1-interacting 1 NIMIN-1, NIM1-interacting 1 0.59 0.3 -0.3
41 AT5G04630 cytochrome P450, family 77, subfamily A, polypeptide 9 cytochrome P450, family 77,
subfamily A, polypeptide 9		 0.59 0.3 -0.3
42 AT2G19330 plant intracellular ras group-related LRR 6 plant intracellular ras
group-related LRR 6		 0.59 0.33 -0.32
43 AT4G00830 RNA-binding (RRM/RBD/RNP motifs) family protein LHP1-Interacting Factor 2 -0.59 0.31 -0.33
44 AT1G30455 transcription regulators;translation initiation
factors;zinc ion binding;transcription activators		 0.59 0.33 -0.31
45 AT3G14120 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
transport; LOCATED IN: nuclear pore; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Nuclear pore protein 84/107
(InterPro:IPR007252); Has 5399 Blast hits to 5001 proteins
in 612 species: Archae - 19; Bacteria - 730; Metazoa -
2186; Fungi - 823; Plants - 382; Viruses - 37; Other
Eukaryotes - 1222 (source: NCBI BLink).		 -0.59 0.33 -0.31
46 AT2G10370 transposable element gene 0.59 0.32 -0.32
47 AT2G06000 Pentatricopeptide repeat (PPR) superfamily protein -0.59 0.3 -0.32
48 AT1G54230 Winged helix-turn-helix transcription repressor DNA-binding 0.59 0.32 -0.31
49 AT3G26370 O-fucosyltransferase family protein -0.58 0.32 -0.29
50 AT1G54700 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: mitochondrion;
CONTAINS InterPro DOMAIN/s: Serine endopeptidase DegP2
(InterPro:IPR015724); BEST Arabidopsis thaliana protein
match is: DegP protease 13 (TAIR:AT5G40560.1); Has 78 Blast
hits to 78 proteins in 13 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.58 0.32 -0.32
51 AT5G02600 Heavy metal transport/detoxification superfamily protein SODIUM POTASSIUM ROOT DEFECTIVE 1,
nuclear-enriched phloem companion
cell gene 6		 0.58 0.31 -0.31
52 AT5G49210 unknown protein; Has 3675 Blast hits to 2315 proteins in
312 species: Archae - 2; Bacteria - 342; Metazoa - 1190;
Fungi - 281; Plants - 114; Viruses - 4; Other Eukaryotes -
1742 (source: NCBI BLink).		 -0.58 0.32 -0.32
53 AT4G36930 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 SPATULA -0.58 0.28 -0.32
54 AT4G09140 MUTL-homologue 1 ARABIDOPSIS THALIANA
MUTL-HOMOLOGUE 1, MUTL-homologue 1		 -0.58 0.3 -0.29
55 AT5G29090 transposable element gene 0.58 0.32 -0.31
56 AT3G56630 cytochrome P450, family 94, subfamily D, polypeptide 2 cytochrome P450, family 94,
subfamily D, polypeptide 2		 -0.58 0.32 -0.3
57 AT1G29600 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.58 0.3 -0.3
58 AT3G05780 lon protease 3 lon protease 3 -0.57 0.31 -0.29
59 AT1G17470 developmentally regulated G-protein 1 ATDRG, developmentally regulated
G-protein 1, developmentally
regulated G-protein 1		 -0.57 0.3 -0.3
60 AT3G43390 transposable element gene -0.57 0.32 -0.34
61 AT5G42910 Basic-leucine zipper (bZIP) transcription factor family
protein		 0.57 0.31 -0.3
62 AT5G66360 Ribosomal RNA adenine dimethylase family protein adenosine dimethyl transferase 1B -0.57 0.32 -0.33
63 AT1G04080 Tetratricopeptide repeat (TPR)-like superfamily protein PRP39 -0.57 0.33 -0.3
64 AT2G05720 Transducin/WD40 repeat-like superfamily protein 0.57 0.33 -0.34
65 AT3G48640 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 10 plant structures;
EXPRESSED DURING: 10 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF677
(InterPro:IPR007749); BEST Arabidopsis thaliana protein
match is: Protein of unknown function (DUF677)
(TAIR:AT5G66670.2); Has 42 Blast hits to 42 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.57 0.33 -0.32
66 AT2G47120 NAD(P)-binding Rossmann-fold superfamily protein 0.57 0.32 -0.31
67 AT3G23650 protein kinase-related 0.57 0.31 -0.29
68 AT1G53360 F-box associated ubiquitination effector family protein 0.57 0.33 -0.32
69 AT2G10465 transposable element gene 0.56 0.34 -0.33
70 AT5G60470 C2H2 and C2HC zinc fingers superfamily protein 0.56 0.31 -0.32
71 AT5G09330 NAC domain containing protein 82 NAC domain containing protein 82,
NAC domain containing protein 82,
VND-interacting 1		 -0.56 0.32 -0.29
72 AT3G14710 RNI-like superfamily protein 0.56 0.3 -0.32
73 AT3G30846 transposable element gene 0.56 0.32 -0.31
74 AT4G00890 proline-rich family protein 0.56 0.32 -0.32
75 AT2G07020 Protein kinase protein with adenine nucleotide alpha
hydrolases-like domain		 0.56 0.3 -0.33
76 AT5G12280 SWAP (Suppressor-of-White-APricot)/surp RNA-binding
domain-containing protein		 0.56 0.3 -0.3
77 AT1G51880 root hair specific 6 root hair specific 6 0.56 0.31 -0.33
78 AT5G38070 RING/FYVE/PHD zinc finger superfamily protein 0.56 0.31 -0.33
79 AT1G67640 Transmembrane amino acid transporter family protein 0.56 0.29 -0.34
80 AT1G15320 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: flower; EXPRESSED
DURING: petal differentiation and expansion stage; Has 62
Blast hits to 62 proteins in 17 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 62; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.55 0.31 -0.33
81 AT4G34690 unknown protein; Has 9 Blast hits to 9 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 8; Viruses - 0; Other Eukaryotes - 1 (source: NCBI
BLink).		 0.55 0.33 -0.32
82 AT3G23010 receptor like protein 36 receptor like protein 36, receptor
like protein 36		 0.55 0.33 -0.32
83 AT5G37980 Zinc-binding dehydrogenase family protein 0.55 0.29 -0.33
84 AT4G26340 F-box/RNI-like/FBD-like domains-containing protein 0.55 0.31 -0.32
85 AT2G34290 Protein kinase superfamily protein 0.54 0.29 -0.3
86 AT2G35580 Serine protease inhibitor (SERPIN) family protein 0.54 0.3 -0.33
87 AT2G40740 WRKY DNA-binding protein 55 WRKY DNA-BINDING PROTEIN 55, WRKY
DNA-binding protein 55		 -0.54 0.33 -0.34
88 AT2G48160 Tudor/PWWP/MBT domain-containing protein -0.54 0.31 -0.31
89 AT1G33920 phloem protein 2-A4 phloem protein 2-A4, phloem
protein 2-A4		 0.54 0.33 -0.31
90 AT1G79750 NADP-malic enzyme 4 Arabidopsis thaliana NADP-malic
enzyme 4, NADP-malic enzyme 4		 -0.53 0.32 -0.31
91 AT4G11470 cysteine-rich RLK (RECEPTOR-like protein kinase) 31 cysteine-rich RLK (RECEPTOR-like
protein kinase) 31		 0.53 0.32 -0.3
92 AT1G28590 GDSL-like Lipase/Acylhydrolase superfamily protein 0.53 0.31 -0.3
93 AT3G22340 transposable element gene 0.53 0.32 -0.31
94 AT4G10090 elongator protein 6 elongator protein 6 -0.53 0.3 -0.32
95 AT2G26590 regulatory particle non-ATPase 13 regulatory particle non-ATPase 13 -0.53 0.31 -0.33
96 AT1G01990 unknown protein; Has 32 Blast hits to 32 proteins in 6
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.53 0.31 -0.31
97 AT1G05540 Protein of unknown function (DUF295) 0.53 0.3 -0.3
98 AT2G32680 receptor like protein 23 receptor like protein 23, receptor
like protein 23		 0.53 0.3 -0.31
99 AT4G14660 RNA polymerase Rpb7-like, N-terminal domain NRPE7 -0.52 0.32 -0.31
100 AT4G26000 RNA-binding KH domain-containing protein PEPPER -0.52 0.33 -0.32
101 AT1G35900 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.51 0.29 -0.31
102 AT4G32180 pantothenate kinase 2 pantothenate kinase 2,
pantothenate kinase 2		 -0.51 0.31 -0.31
103 AT3G15970 NUP50 (Nucleoporin 50 kDa) protein -0.51 0.3 -0.32
104 AT5G63200 tetratricopeptide repeat (TPR)-containing protein -0.51 0.33 -0.32
105 AT1G14090 pseudogene, pentatricopeptide (PPR) repeat-containing
protein, contains Pfam profile PF01535: PPR repeat; blastp
match of 33% identity and 1.5e-16 P-value to
GP|20219038|gb|AAM15782.1|AC104428_3|AC104428 Putative
indole-3-acetate beta-glucosyltransferase {Oryza sativa
(japonica cultivar-group)}		 -0.51 0.32 -0.3
106 AT4G21710 DNA-directed RNA polymerase family protein EMBRYO DEFECTIVE 1989, NRPB2, RPB2 -0.51 0.31 -0.32
107 AT1G48070 Thioredoxin superfamily protein -0.51 0.31 -0.31
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
108 C0087 Erythrose-4-phosphate D-Erythrose-4-phosphate D-Erythrose-4-phosphate Rubisco shunt,
pentose phosphate pathway (non-oxidative branch),
chorismate biosynthesis,
Calvin-Benson-Bassham cycle 		0.69 0.42 -0.45 C0087
109 C0020 1-Aminocyclopropane-1-carboxylic acid - 1-Aminocyclopropane-1-carboxylate jasmonoyl-amino acid conjugates biosynthesis I,
ethylene biosynthesis I (plants),
methionine salvage pathway 		-0.67 0.42 -0.42 C0020
110 C0195 Phenylpyruvic acid - Phenylpyruvate phenylalanine degradation III 0.6 0.45 -0.46 C0195
111 C0259 Tyramine - Tyramine hydroxycinnamic acid tyramine amides biosynthesis,
suberin biosynthesis 		0.55 0.32 -0.3 C0259