AT2G05540 : -
Query Information
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AGICode AT2G05540
Description Glycine-rich protein family
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G05540 Glycine-rich protein family 1 0.31 -0.33
2 AT3G20100 cytochrome P450, family 705, subfamily A, polypeptide 19 cytochrome P450, family 705,
subfamily A, polypeptide 19		 0.74 0.32 -0.32
3 AT1G62510 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.73 0.32 -0.33
4 AT4G30040 Eukaryotic aspartyl protease family protein -0.71 0.31 -0.34
5 AT5G26010 Protein phosphatase 2C family protein 0.7 0.3 -0.33
6 AT2G28085 SAUR-like auxin-responsive protein family -0.7 0.3 -0.32
7 AT1G15330 Cystathionine beta-synthase (CBS) protein 0.69 0.31 -0.34
8 AT4G28520 cruciferin 3 CRUCIFERIN C, cruciferin 3 0.68 0.31 -0.29
9 AT1G13700 6-phosphogluconolactonase 1 6-phosphogluconolactonase 1 0.68 0.3 -0.3
10 AT4G00750 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.68 0.31 -0.35
11 AT4G10120 Sucrose-phosphate synthase family protein ATSPS4F -0.68 0.32 -0.32
12 AT5G56100 glycine-rich protein / oleosin 0.68 0.31 -0.31
13 AT2G32400 glutamate receptor 5 ATGLR3.7, GLUTAMATE RECEPTOR 3.7,
glutamate receptor 5		 -0.68 0.31 -0.31
14 AT1G62290 Saposin-like aspartyl protease family protein 0.65 0.33 -0.35
15 AT4G08290 nodulin MtN21 /EamA-like transporter family protein 0.65 0.32 -0.33
16 AT2G18630 Protein of unknown function (DUF677) -0.65 0.32 -0.3
17 AT5G63800 Glycosyl hydrolase family 35 protein beta-galactosidase 6,
MUCILAGE-MODIFIED 2		 0.64 0.29 -0.31
18 AT1G72160 Sec14p-like phosphatidylinositol transfer family protein 0.64 0.33 -0.33
19 AT3G09830 Protein kinase superfamily protein -0.64 0.3 -0.31
20 AT1G06850 basic leucine-zipper 52 basic leucine-zipper 52, basic
leucine-zipper 52		 -0.64 0.31 -0.31
21 AT1G21100 O-methyltransferase family protein indole glucosinolate
O-methyltransferase 1		 -0.64 0.32 -0.31
22 AT4G27530 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G53895.1); Has 14 Blast hits
to 14 proteins in 3 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 14; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.63 0.32 -0.32
23 AT4G16160 Mitochondrial import inner membrane translocase subunit
Tim17/Tim22/Tim23 family protein		 ATOEP16-2, ATOEP16-S 0.63 0.33 -0.31
24 AT5G48500 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G10930.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.63 0.31 -0.32
25 AT1G02260 Divalent ion symporter -0.63 0.31 -0.31
26 AT1G04010 phospholipid sterol acyl transferase 1 ATPSAT1, phospholipid sterol acyl
transferase 1		 -0.63 0.29 -0.3
27 AT3G62970 zinc finger (C3HC4-type RING finger) family protein 0.63 0.32 -0.31
28 AT4G01080 TRICHOME BIREFRINGENCE-LIKE 26 TRICHOME BIREFRINGENCE-LIKE 26 -0.63 0.31 -0.31
29 AT1G69800 Cystathionine beta-synthase (CBS) protein 0.62 0.31 -0.31
30 AT2G39130 Transmembrane amino acid transporter family protein -0.62 0.32 -0.33
31 AT1G54740 Protein of unknown function (DUF3049) 0.62 0.32 -0.33
32 AT4G30140 GDSL-like Lipase/Acylhydrolase superfamily protein CUTICLE DESTRUCTING FACTOR 1 -0.62 0.3 -0.31
33 AT4G25140 oleosin 1 OLEOSIN 1, oleosin 1 0.62 0.3 -0.33
34 AT4G29740 cytokinin oxidase 4 ATCKX4, cytokinin oxidase 4 -0.61 0.3 -0.31
35 AT4G10020 hydroxysteroid dehydrogenase 5 hydroxysteroid dehydrogenase 5,
hydroxysteroid dehydrogenase 5		 0.61 0.31 -0.3
36 AT2G29380 highly ABA-induced PP2C gene 3 highly ABA-induced PP2C gene 3 0.61 0.32 -0.34
37 AT2G41260 glycine-rich protein / late embryogenesis abundant protein
(M17)		 ATM17, M17 0.61 0.3 -0.32
38 AT3G22640 cupin family protein PAP85 0.61 0.31 -0.3
39 AT4G18550 alpha/beta-Hydrolases superfamily protein Arabidopsis thaliana DAD1-like
seeding establishment-related
lipase, DAD1-like seeding
establishment-related lipase		 0.6 0.31 -0.34
40 AT4G38420 SKU5 similar 9 SKU5 similar 9 -0.6 0.32 -0.3
41 AT3G09405 Pectinacetylesterase family protein -0.6 0.3 -0.32
42 AT1G23390 Kelch repeat-containing F-box family protein 0.6 0.33 -0.33
43 AT1G54870 NAD(P)-binding Rossmann-fold superfamily protein 0.6 0.32 -0.34
44 AT5G50260 Cysteine proteinases superfamily protein cysteine endopeptidase 1 0.6 0.33 -0.32
45 AT3G01570 Oleosin family protein 0.6 0.31 -0.33
46 AT1G05510 Protein of unknown function (DUF1264) 0.59 0.32 -0.32
47 AT5G18390 Pentatricopeptide repeat (PPR) superfamily protein 0.59 0.29 -0.32
48 AT1G54860 Glycoprotein membrane precursor GPI-anchored 0.59 0.31 -0.3
49 AT1G61360 S-locus lectin protein kinase family protein -0.59 0.32 -0.32
50 AT1G30530 UDP-glucosyl transferase 78D1 UDP-glucosyl transferase 78D1 -0.58 0.32 -0.32
51 AT3G05980 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G19340.1); Has 202 Blast hits
to 202 proteins in 28 species: Archae - 0; Bacteria - 0;
Metazoa - 39; Fungi - 4; Plants - 148; Viruses - 0; Other
Eukaryotes - 11 (source: NCBI BLink).		 -0.58 0.31 -0.31
52 AT2G06210 binding EARLY FLOWERING 8, VERNALIZATION
INDEPENDENCE 6		 -0.58 0.3 -0.34
53 AT1G73310 serine carboxypeptidase-like 4 serine carboxypeptidase-like 4 -0.58 0.33 -0.31
54 AT5G40960 Protein of unknown function (DUF 3339) 0.58 0.31 -0.31
55 AT1G21920 Histone H3 K4-specific methyltransferase SET7/9 family
protein		 0.58 0.31 -0.33
56 AT1G31670 Copper amine oxidase family protein -0.58 0.33 -0.32
57 AT1G55170 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G14750.1); Has 13439 Blast
hits to 8993 proteins in 828 species: Archae - 344;
Bacteria - 1469; Metazoa - 6958; Fungi - 1008; Plants -
683; Viruses - 29; Other Eukaryotes - 2948 (source: NCBI
BLink).		 -0.58 0.32 -0.3
58 AT5G64890 elicitor peptide 2 precursor elicitor peptide 2 precursor -0.58 0.3 -0.31
59 AT5G47810 phosphofructokinase 2 phosphofructokinase 2 0.57 0.32 -0.33
60 AT2G12720 transposable element gene 0.57 0.32 -0.32
61 AT4G37790 Homeobox-leucine zipper protein family HAT22 0.57 0.32 -0.32
62 AT5G57655 xylose isomerase family protein 0.57 0.31 -0.32
63 AT2G29940 pleiotropic drug resistance 3 ATP-binding cassette G31,
PLEIOTROPIC DRUG RESISTANCE 3,
pleiotropic drug resistance 3		 -0.57 0.31 -0.33
64 AT3G04910 with no lysine (K) kinase 1 ATWNK1, with no lysine (K) kinase
1, ZIK4		 -0.57 0.32 -0.33
65 AT2G20950 Arabidopsis phospholipase-like protein (PEARLI 4) family -0.57 0.33 -0.31
66 AT3G51860 cation exchanger 3 ATCAX3, ATHCX1, CAX1-LIKE, cation
exchanger 3		 0.57 0.32 -0.33
67 AT5G02990 Galactose oxidase/kelch repeat superfamily protein -0.57 0.33 -0.3
68 AT5G57785 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.57 0.33 -0.33
69 AT1G71160 3-ketoacyl-CoA synthase 7 3-ketoacyl-CoA synthase 7 0.56 0.32 -0.3
70 AT2G38530 lipid transfer protein 2 cell growth defect factor-3, LP2,
lipid transfer protein 2		 0.56 0.33 -0.36
71 AT3G55940 Phosphoinositide-specific phospholipase C family protein -0.56 0.32 -0.31
72 AT1G47570 RING/U-box superfamily protein 0.56 0.33 -0.31
73 AT2G21380 Kinesin motor family protein -0.56 0.33 -0.3
74 AT3G45640 mitogen-activated protein kinase 3 ATMAPK3, mitogen-activated protein
kinase 3, mitogen-activated
protein kinase 3		 -0.56 0.32 -0.34
75 AT2G15010 Plant thionin 0.56 0.31 -0.32
76 AT1G60140 trehalose phosphate synthase trehalose phosphate synthase,
trehalose phosphate synthase,
TREHALOSE PHOSPHATE SYNTHASE 10		 0.56 0.32 -0.3
77 AT2G16630 Pollen Ole e 1 allergen and extensin family protein 0.56 0.32 -0.34
78 AT3G56410 Protein of unknown function (DUF3133) -0.55 0.3 -0.31
79 AT2G02440 unknown protein; Has 3 Blast hits to 3 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.55 0.35 -0.29
80 AT1G68880 basic leucine-zipper 8 basic leucine-zipper 8, basic
leucine-zipper 8		 0.55 0.32 -0.31
81 AT5G46760 Basic helix-loop-helix (bHLH) DNA-binding family protein MYC3 -0.55 0.32 -0.3
82 AT4G24060 Dof-type zinc finger DNA-binding family protein 0.55 0.31 -0.31
83 AT3G50610 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G66816.1); Has 125 Blast hits
to 60 proteins in 16 species: Archae - 0; Bacteria - 2;
Metazoa - 10; Fungi - 4; Plants - 97; Viruses - 0; Other
Eukaryotes - 12 (source: NCBI BLink).		 -0.54 0.33 -0.31
84 AT5G42190 E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family
protein		 Arabidopsis SKP-like 2, SKP1B 0.54 0.32 -0.28
85 AT1G16980 trehalose-phosphatase/synthase 2 trehalose-phosphatase/synthase 2,
TREHALOSE -6-PHOSPHATASE SYNTHASE
S2, trehalose-phosphatase/synthase
2		 0.54 0.32 -0.29
86 AT2G23990 early nodulin-like protein 11 AtENODL11, early nodulin-like
protein 11		 -0.54 0.3 -0.31
87 AT5G54000 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.54 0.32 -0.31
88 AT5G62230 ERECTA-like 1 ERECTA-like 1 -0.54 0.31 -0.31
89 AT2G31230 ethylene-responsive element binding factor 15 ethylene-responsive element
binding factor 15,
ethylene-responsive element
binding factor 15		 -0.54 0.31 -0.31
90 AT5G40030 Protein kinase superfamily protein 0.54 0.3 -0.3
91 AT3G29635 HXXXD-type acyl-transferase family protein -0.54 0.33 -0.32
92 AT4G07330 transposable element gene -0.54 0.33 -0.32
93 AT4G08590 ORTHRUS-like ORTH-LIKE 1, ORTHRUS-LIKE 1,
ORTHRUS-like, VARIANT IN
METHYLATION 6		 0.54 0.31 -0.31
94 AT5G59450 GRAS family transcription factor -0.54 0.3 -0.33
95 AT4G32140 EamA-like transporter family -0.54 0.32 -0.31
96 AT5G18970 AWPM-19-like family protein -0.54 0.3 -0.31
97 AT3G15170 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 Arabidopsis NAC domain containing
protein 54, ATNAC1, CUP-SHAPED
COTYLEDON1		 0.53 0.33 -0.32
98 AT5G18690 arabinogalactan protein 25 arabinogalactan protein 25,
ARABIDOPSIS THALIANA
ARABINOGALACTAN PROTEINS 25		 0.53 0.31 -0.3
99 AT5G07150 Leucine-rich repeat protein kinase family protein -0.53 0.31 -0.3
100 AT4G33280 AP2/B3-like transcriptional factor family protein -0.53 0.32 -0.31
101 AT3G28180 Cellulose-synthase-like C4 Cellulose-synthase-like C4,
ATCSLC4, CSLC04,
Cellulose-synthase-like C4,
CELLULOSE-SYNTHASE LIKE C4		 -0.53 0.34 -0.31
102 AT2G41250 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 0.53 0.31 -0.32
103 AT2G01170 bidirectional amino acid transporter 1 bidirectional amino acid
transporter 1		 -0.53 0.3 -0.3
104 AT5G26731 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.53 0.31 -0.3
105 AT1G20670 DNA-binding bromodomain-containing protein -0.53 0.32 -0.32
106 AT1G60500 Dynamin related protein 4C Dynamin related protein 4C 0.53 0.33 -0.31
107 AT1G20840 tonoplast monosaccharide transporter1 AtTMT1, tonoplast monosaccharide
transporter1		 -0.53 0.34 -0.33
108 AT4G28090 SKU5 similar 10 SKU5 similar 10 -0.53 0.31 -0.32
109 AT4G21100 damaged DNA binding protein 1B damaged DNA binding protein 1B -0.52 0.34 -0.34
110 AT5G63440 Protein of unknown function (DUF167) -0.52 0.33 -0.32
111 AT1G20690 SWI-SNF-related chromatin binding protein -0.52 0.33 -0.32
112 AT5G16460 Putative adipose-regulatory protein (Seipin) 0.52 0.32 -0.3
113 AT3G06890 unknown protein; Has 91 Blast hits to 91 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 91; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.52 0.31 -0.31
114 AT2G33350 CCT motif family protein 0.52 0.34 -0.31
115 AT4G39480 cytochrome P450, family 96, subfamily A, polypeptide 9 cytochrome P450, family 96,
subfamily A, polypeptide 9		 0.51 0.31 -0.32
116 AT3G12955 SAUR-like auxin-responsive protein family 0.51 0.31 -0.35
117 AT5G44120 RmlC-like cupins superfamily protein CRUCIFERINA, CRUCIFERINA, CRU1 0.51 0.31 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
118 C0071 Cyanidin 3-O-[2''-O-(6'''-O-(sinapoyl) xylosyl) 6''-O-(p-O-(glucosyl)-p-coumaroyl) glucoside] 5-O-(6''''-O-malonyl) glucoside - - - -0.84 0.46 -0.46
119 C0072 Cyanidin 3-O-[2''-O-(xylosyl) glucoside] 5-O-glucoside - - - -0.82 0.46 -0.47
120 C0129 Kaempferol-3-(2''-O-α-rhamnosyl)-O-β-glucosyl-7-O-α-rhamnoside Kaempferol-3-(2''-O-α-L-rhamnosyl)-O-β-D-glucosyl-7-O-α-L-rhamnoside - kaempferol glucoside biosynthesis (Arabidopsis) -0.81 0.48 -0.43
121 C0070 Cyanidin 3-O-[2''-O-(2'''-O-(sinapoyl)xylosyl) 6''-O-(p-O-coumaroyl) glucoside] 5-O-[6''''-O-(malonyl) glucoside] - - - -0.8 0.45 -0.45
122 C0182 MST_2996.4 - - - -0.77 0.48 -0.46
123 C0130 Kaempferol-3-O-α-rhamnopyranosyl(1,2)-β-glucopyranoside-7-O-α-rhamnopyranoside Kaempferol-3-O-α-L-rhamnopyranosyl(1,2)-β-D-glucopyranoside-7-O-α-L-rhamnopyranoside - -0.74 0.46 -0.42
124 C0158 MST_1480.5 - - - -0.7 0.45 -0.48
125 C0176 MST_2406.9 - - - -0.69 0.46 -0.46
126 C0184 MST_3110.4 - - - -0.68 0.47 -0.49
127 C0169 MST_2105.7 - - - -0.67 0.46 -0.43
128 C0009 myo-Inositol - myo-Inositol stachyose biosynthesis,
UDP-D-glucuronate biosynthesis (from myo-inositol),
1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza),
D-myo-inositol (1,4,5)-trisphosphate degradation,
galactosylcyclitol biosynthesis,
D-myo-inositol (1,4,5)-trisphosphate biosynthesis,
phytate degradation I,
myo-inositol biosynthesis,
ajugose biosynthesis I (galactinol-dependent),
phospholipid biosynthesis II 		-0.65 0.46 -0.47 C0009
129 C0180 MST_2539.9 - - - -0.65 0.46 -0.41
130 C0255 Trehalose α,α-D-Trehalose Trehalose trehalose degradation II (trehalase),
trehalose biosynthesis I 		-0.55 0.33 -0.31 C0255