AGICode | AT2G15810 |
Description | transposable element gene |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT2G15810 | transposable element gene | 1 | 0.32 | -0.33 | |||
2 | AT3G50380 | Protein of unknown function (DUF1162) | 0.71 | 0.33 | -0.31 | |||
3 | AT5G25560 | CHY-type/CTCHY-type/RING-type Zinc finger protein | 0.69 | 0.31 | -0.33 | |||
4 | AT3G05150 | Major facilitator superfamily protein | -0.68 | 0.32 | -0.31 | |||
5 | AT2G18440 | GUT15 (GENE WITH UNSTABLE TRANSCRIPT 15); other RNA | GENE WITH UNSTABLE TRANSCRIPT 15 | 0.67 | 0.3 | -0.3 | ||
6 | AT3G48750 | cell division control 2 | cell division control 2, CDC2A, CDC2AAT, CDK2, CDKA1, CDKA;1 |
-0.66 | 0.32 | -0.32 | ||
7 | AT2G22475 | GRAM domain family protein | GL2-EXPRESSION MODULATOR | -0.66 | 0.31 | -0.29 | ||
8 | AT2G46180 | golgin candidate 4 | golgin candidate 4 | 0.66 | 0.31 | -0.31 | ||
9 | AT2G30050 | transducin family protein / WD-40 repeat family protein | -0.66 | 0.33 | -0.3 | |||
10 | AT2G39340 | SAC3/GANP/Nin1/mts3/eIF-3 p25 family | AtSAC3A, yeast Sac3 homolog A | 0.65 | 0.33 | -0.31 | ||
11 | AT4G03190 | GRR1-like protein 1 | AUXIN SIGNALING F BOX PROTEIN 1, ATGRH1, GRR1-like protein 1 |
-0.65 | 0.31 | -0.31 | ||
12 | AT5G39320 | UDP-glucose 6-dehydrogenase family protein | -0.65 | 0.33 | -0.32 | |||
13 | AT5G55940 | Uncharacterised protein family (UPF0172) | embryo defective 2731 | -0.65 | 0.3 | -0.31 | ||
14 | AT1G12000 | Phosphofructokinase family protein | -0.65 | 0.3 | -0.33 | |||
15 | AT1G27390 | translocase outer membrane 20-2 | translocase outer membrane 20-2 | -0.64 | 0.3 | -0.31 | ||
16 | AT5G55390 | ENHANCED DOWNY MILDEW 2 | ENHANCED DOWNY MILDEW 2 | 0.64 | 0.33 | -0.31 | ||
17 | AT3G22540 | Protein of unknown function (DUF1677) | -0.64 | 0.3 | -0.32 | |||
18 | AT2G19760 | profilin 1 | PROFILIN 1, profilin 1 | -0.64 | 0.32 | -0.32 | ||
19 | AT5G35260 | transposable element gene | 0.64 | 0.32 | -0.33 | |||
20 | AT1G19360 | Nucleotide-diphospho-sugar transferase family protein | reduced residual arabinose 3 | -0.63 | 0.33 | -0.31 | ||
21 | AT5G45610 | protein dimerizations | SENSITIVE TO UV 2 | 0.63 | 0.33 | -0.34 | ||
22 | AT1G07020 | unknown protein; Has 39 Blast hits to 39 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 3; Plants - 28; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
-0.63 | 0.32 | -0.33 | |||
23 | AT5G07960 | unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0139 (InterPro:IPR005351); Has 193 Blast hits to 193 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 130; Fungi - 0; Plants - 52; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). |
-0.63 | 0.33 | -0.31 | |||
24 | AT2G21160 | Translocon-associated protein (TRAP), alpha subunit | -0.63 | 0.31 | -0.31 | |||
25 | AT5G63400 | adenylate kinase 1 | adenylate kinase 1 | -0.63 | 0.3 | -0.32 | ||
26 | AT1G01040 | dicer-like 1 | ABNORMAL SUSPENSOR 1, DICER-LIKE 1, CARPEL FACTORY, dicer-like 1, EMBRYO DEFECTIVE 60, EMBRYO DEFECTIVE 76, SHORT INTEGUMENTS 1, SUSPENSOR 1 |
0.62 | 0.31 | -0.32 | ||
27 | AT5G47550 | Cystatin/monellin superfamily protein | -0.62 | 0.29 | -0.32 | |||
28 | AT4G22300 | carboxylesterases | SUPPRESSOR OF AVRBST-ELICITED RESISTANCE 1 |
-0.61 | 0.32 | -0.32 | ||
29 | AT1G21160 | eukaryotic translation initiation factor 2 (eIF-2) family protein |
0.61 | 0.3 | -0.32 | |||
30 | AT2G20060 | Ribosomal protein L4/L1 family | -0.61 | 0.31 | -0.33 | |||
31 | AT1G63000 | nucleotide-rhamnose synthase/epimerase-reductase | nucleotide-rhamnose synthase/epimerase-reductase, UDP-4-KETO-6-DEOXY-D-GLUCOSE-3,5-E PIMERASE-4-REDUCTASE 1 |
-0.61 | 0.32 | -0.31 | ||
32 | AT3G08020 | PHD finger family protein | 0.61 | 0.33 | -0.29 | |||
33 | AT5G05780 | RP non-ATPase subunit 8A | ASYMMETRIC LEAVES ENHANCER 3, ATHMOV34, RP non-ATPase subunit 8A |
-0.6 | 0.3 | -0.33 | ||
34 | AT3G46030 | Histone superfamily protein | HTB11 | -0.6 | 0.32 | -0.32 | ||
35 | AT5G02740 | Ribosomal protein S24e family protein | -0.6 | 0.31 | -0.29 | |||
36 | AT4G38850 | SAUR-like auxin-responsive protein family | ARABIDOPSIS THALIANA SMALL AUXIN UPREGULATED 15, ARABIDOPSIS COLUMBIA SAUR GENE 1, SMALL AUXIN UPREGULATED 15, SMALL AUXIN UP RNA 1 FROM ARABIDOPSIS THALIANA ECOTYPE COLUMBIA |
-0.6 | 0.32 | -0.32 | ||
37 | AT4G22720 | Actin-like ATPase superfamily protein | -0.6 | 0.32 | -0.34 | |||
38 | AT3G20910 | nuclear factor Y, subunit A9 | nuclear factor Y, subunit A9 | 0.6 | 0.34 | -0.35 | ||
39 | AT5G10430 | arabinogalactan protein 4 | arabinogalactan protein 4, ATAGP4 | -0.59 | 0.32 | -0.34 | ||
40 | AT3G14075 | Mono-/di-acylglycerol lipase, N-terminal;Lipase, class 3 | 0.59 | 0.3 | -0.34 | |||
41 | AT1G55970 | histone acetyltransferase of the CBP family 4 | HAC04, histone acetyltransferase of the CBP family 4, HISTONE ACETYLTRANSFERASE OF THE CBP FAMILY 6, HISTONE ACETYLTRANSFERASE OF THE GNAT/MYST SUPERFAMILY 04, HISTONE ACETYLTRANSFERASE OF THE GNAT/MYST SUPERFAMILY 4 |
0.59 | 0.31 | -0.31 | ||
42 | AT2G18590 | Major facilitator superfamily protein | 0.59 | 0.33 | -0.33 | |||
43 | AT1G07210 | Ribosomal protein S18 | -0.59 | 0.3 | -0.31 | |||
44 | AT3G03160 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular protein transport; LOCATED IN: endomembrane system, integral to membrane, endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: B-cell receptor-associated 31-like (InterPro:IPR008417); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17190.1); Has 102 Blast hits to 102 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 102; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.58 | 0.3 | -0.32 | |||
45 | AT5G05610 | alfin-like 1 | alfin-like 1 | -0.58 | 0.34 | -0.31 | ||
46 | AT1G14660 | Na+/H+ exchanger 8 | Na+/H+ exchanger 8, Na+/H+ exchanger 8, SODIUM HYDROGEN EXCHANGER 8 |
0.58 | 0.33 | -0.32 | ||
47 | AT5G66280 | GDP-D-mannose 4,6-dehydratase 1 | GDP-D-mannose 4,6-dehydratase 1 | -0.58 | 0.31 | -0.33 | ||
48 | AT2G04650 | ADP-glucose pyrophosphorylase family protein | -0.58 | 0.34 | -0.33 | |||
49 | AT5G47770 | farnesyl diphosphate synthase 1 | farnesyl diphosphate synthase 1 | -0.58 | 0.32 | -0.34 | ||
50 | AT3G50010 | Cysteine/Histidine-rich C1 domain family protein | -0.58 | 0.31 | -0.33 | |||
51 | AT4G30010 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; Has 39 Blast hits to 39 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.58 | 0.32 | -0.3 | |||
52 | AT3G50140 | Plant protein of unknown function (DUF247) | -0.57 | 0.29 | -0.32 | |||
53 | AT2G20780 | Major facilitator superfamily protein | -0.57 | 0.3 | -0.32 | |||
54 | AT5G44150 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). |
0.57 | 0.3 | -0.35 | |||
55 | AT2G47320 | Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein |
-0.57 | 0.32 | -0.34 | |||
56 | AT5G20950 | Glycosyl hydrolase family protein | -0.57 | 0.3 | -0.3 | |||
57 | AT4G39860 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G22270.1); Has 152 Blast hits to 146 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 146; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). |
-0.57 | 0.3 | -0.32 | |||
58 | AT5G57400 | unknown protein; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.56 | 0.32 | -0.33 | |||
59 | AT4G16450 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photorespiration; LOCATED IN: mitochondrion, mitochondrial membrane, mitochondrial respiratory chain complex I, respiratory chain complex I, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.56 | 0.31 | -0.32 | |||
60 | AT5G60980 | Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain |
-0.56 | 0.32 | -0.32 | |||
61 | AT1G75960 | AMP-dependent synthetase and ligase family protein | -0.56 | 0.34 | -0.29 | |||
62 | AT3G04680 | CLP-similar protein 3 | CLP-similar protein 3 | -0.56 | 0.33 | -0.29 | ||
63 | AT5G46470 | disease resistance protein (TIR-NBS-LRR class) family | RESISTANT TO P. SYRINGAE 6 | 0.55 | 0.3 | -0.32 | ||
64 | AT5G58830 | Subtilisin-like serine endopeptidase family protein | 0.55 | 0.31 | -0.29 | |||
65 | AT1G04950 | TATA BOX ASSOCIATED FACTOR II 59 | ATTAF6, EMBRYO DEFECTIVE 2781, TBP-associated factor 6, TATA BOX ASSOCIATED FACTOR II 59 |
0.55 | 0.32 | -0.32 | ||
66 | AT5G11320 | Flavin-binding monooxygenase family protein | YUCCA4 | 0.53 | 0.32 | -0.31 | ||
67 | AT4G32010 | HSI2-like 1 | HSI2-L1, HSI2-like 1, VP1/ABI3-LIKE 2 |
0.53 | 0.33 | -0.31 | ||
68 | AT5G60290 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.53 | 0.33 | -0.3 | |||
69 | AT2G16910 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
ABORTED MICROSPORES | 0.52 | 0.3 | -0.31 | ||
70 | AT2G21310 | transposable element gene | 0.52 | 0.31 | -0.32 | |||
71 | AT2G40030 | nuclear RNA polymerase D1B | ATNRPD1B, DEFECTIVE IN MERISTEM SILENCING 5, DRD3, nuclear RNA polymerase D1B, NRPE1 |
0.52 | 0.34 | -0.31 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
72 | C0109 | Guanine | - | Guanine | guanine and guanosine salvage II, guanosine nucleotides degradation II |
0.69 | 0.44 | -0.43 | ||
73 | C0267 | Zeatin | cis-Zeatin | cis-Zeatin | cytokinins-O-glucoside biosynthesis, cytokinins degradation, cytokinins 7-N-glucoside biosynthesis, cytokinins 9-N-glucoside biosynthesis, cis-zeatin biosynthesis |
0.67 | 0.45 | -0.43 | ||
74 | C0107 | Glycine | - | Glycine | 5-aminoimidazole ribonucleotide biosynthesis I, gamma-glutamyl cycle, folate polyglutamylation, gamma-glutamyl cycle (plant pathway), glutathione biosynthesis, glutathione-mediated detoxification II, folate transformations II, indole glucosinolate breakdown (active in intact plant cell), glycine cleavage complex, camalexin biosynthesis, thiamine biosynthesis II, tRNA charging, glycine biosynthesis, glutathione degradation, photorespiration |
0.65 | 0.47 | -0.46 |