AT2G28290 : CHROMATIN REMODELING COMPLEX SUBUNIT R 3
Query Information
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AGICode AT2G28290
Description P-loop containing nucleoside triphosphate hydrolases superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G28290 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 CHROMATIN REMODELING COMPLEX
SUBUNIT R 3, SPLAYED		 1 0.33 -0.33
2 AT1G02080 transcription regulators 0.87 0.31 -0.33
3 AT1G32750 HAC13 protein (HAC13) GTD1, HISTONE ACETYLTRANSFERASE OF
THE CBP FAMILY 13, HAF01, HISTONE
ACETYLTRANSFERASE OF THE TAFII250
FAMILY 1, TBP-ASSOCIATED FACTOR 1		 0.86 0.31 -0.33
4 AT2G26890 DNAJ heat shock N-terminal domain-containing protein GRAVITROPISM DEFECTIVE 2,
KATAMARI2		 0.85 0.32 -0.3
5 AT1G34350 unknown protein; Has 192 Blast hits to 192 proteins in 79
species: Archae - 0; Bacteria - 0; Metazoa - 104; Fungi -
0; Plants - 60; Viruses - 0; Other Eukaryotes - 28 (source:
NCBI BLink).		 -0.84 0.31 -0.29
6 AT2G17930 Phosphatidylinositol 3- and 4-kinase family protein with
FAT domain		 0.82 0.3 -0.31
7 AT4G32620 Enhancer of polycomb-like transcription factor protein 0.81 0.33 -0.33
8 AT1G24190 SIN3-like 3 ARABIDOPSIS THALIANA SIN3 HOMOLOG,
ARABIDOPSIS THALIANA SIN3 HOMOLOG,
SIN3-like 3		 0.81 0.29 -0.32
9 AT2G03140 alpha/beta-Hydrolases superfamily protein 0.79 0.32 -0.32
10 AT4G38600 HEAT repeat ;HECT-domain (ubiquitin-transferase) KAKTUS, UBIQUITIN-PROTEIN LIGASE 3 0.79 0.32 -0.32
11 AT5G24350 CONTAINS InterPro DOMAIN/s: Secretory pathway Sec39
(InterPro:IPR013244); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).		 0.78 0.32 -0.3
12 AT3G19450 GroES-like zinc-binding alcohol dehydrogenase family
protein		 ATCAD4, CAD, CAD-C, CINNAMYL
ALCOHOL DEHYDROGENASE 4		 -0.78 0.33 -0.29
13 AT1G10430 protein phosphatase 2A-2 protein phosphatase 2A-2 -0.78 0.31 -0.34
14 AT1G77750 Ribosomal protein S13/S18 family -0.78 0.29 -0.31
15 AT4G29790 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G19390.1); Has 538 Blast hits
to 357 proteins in 124 species: Archae - 0; Bacteria - 74;
Metazoa - 109; Fungi - 58; Plants - 105; Viruses - 2; Other
Eukaryotes - 190 (source: NCBI BLink).		 0.77 0.33 -0.33
16 AT5G22850 Eukaryotic aspartyl protease family protein 0.77 0.32 -0.33
17 AT1G23230 CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23
(InterPro:IPR021629); Has 187 Blast hits to 184 proteins in
67 species: Archae - 0; Bacteria - 0; Metazoa - 135; Fungi
- 0; Plants - 43; Viruses - 0; Other Eukaryotes - 9
(source: NCBI BLink).		 0.77 0.3 -0.3
18 AT2G07505 zinc ion binding -0.77 0.32 -0.29
19 AT3G50370 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 26 plant
structures; EXPRESSED DURING: 15 growth stages; Has 27734
Blast hits to 16708 proteins in 1259 species: Archae - 81;
Bacteria - 3434; Metazoa - 10876; Fungi - 2514; Plants -
987; Viruses - 212; Other Eukaryotes - 9630 (source: NCBI
BLink).		 0.76 0.33 -0.3
20 AT5G05570 transducin family protein / WD-40 repeat family protein 0.76 0.32 -0.32
21 AT5G18230 transcription regulator NOT2/NOT3/NOT5 family protein 0.76 0.31 -0.3
22 AT2G46020 transcription regulatory protein SNF2, putative ARABIDOPSIS THALIANA BRAHMA,
BRAHMA, CHA2, CHROMATIN REMODELING
2		 0.76 0.34 -0.32
23 AT1G15780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast
hits to 43153 proteins in 1828 species: Archae - 30;
Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants -
7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI
BLink).		 0.76 0.32 -0.29
24 AT3G06400 chromatin-remodeling protein 11 chromatin-remodeling protein 11 0.76 0.3 -0.3
25 AT1G54710 homolog of yeast autophagy 18 (ATG18) H homolog of yeast autophagy 18
(ATG18) H, homolog of yeast
autophagy 18 (ATG18) H		 0.75 0.3 -0.32
26 AT4G17140 pleckstrin homology (PH) domain-containing protein 0.75 0.33 -0.32
27 AT1G77800 PHD finger family protein 0.75 0.3 -0.3
28 AT2G27720 60S acidic ribosomal protein family -0.75 0.33 -0.3
29 AT3G54670 Structural maintenance of chromosomes (SMC) family protein ATSMC1, STRUCTURAL MAINTENANCE OF
CHROMOSOMES 1, TITAN8		 0.75 0.32 -0.34
30 AT3G01100 hypothetical protein 1 ARABIDOPSIS THALIANA HYPOTHETICAL
PROTEIN 1, hypothetical protein 1		 0.75 0.33 -0.31
31 AT4G32850 nuclear poly(a) polymerase nuclear poly(a) polymerase,
poly(A) polymerase IV		 0.75 0.29 -0.32
32 AT3G07160 glucan synthase-like 10 glucan synthase-like 10, CALS9,
gsl10, glucan synthase-like 10		 0.74 0.3 -0.32
33 AT4G29830 Transducin/WD40 repeat-like superfamily protein vernalization independence 3 -0.74 0.33 -0.31
34 AT1G22920 COP9 signalosome 5A ARABIDOPSIS JAB1 HOMOLOG 1, COP9
signalosome 5A, JAB1		 -0.74 0.32 -0.34
35 AT3G24740 Protein of unknown function (DUF1644) 0.74 0.31 -0.33
36 AT5G25520 SPOC domain / Transcription elongation factor S-II protein 0.74 0.32 -0.32
37 AT1G07410 RAB GTPase homolog A2B ARABIDOPSIS RAB GTPASE HOMOLOG
A2B, RAB GTPase homolog A2B, RAB
GTPASE HOMOLOG A2B, RAB GTPase
homolog A2B		 -0.74 0.33 -0.32
38 AT3G27080 translocase of outer membrane 20 kDa subunit 3 translocase of outer membrane 20
kDa subunit 3		 -0.74 0.33 -0.3
39 AT5G57390 AINTEGUMENTA-like 5 AINTEGUMENTA-like 5, CHOTTO 1,
EMBRYOMAKER, PLETHORA 5		 0.74 0.33 -0.32
40 AT4G39420 unknown protein; Has 46 Blast hits to 40 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 44; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.73 0.3 -0.29
41 AT3G14270 phosphatidylinositol-4-phosphate 5-kinase family protein FORMS APLOID AND BINUCLEATE CELLS
1B		 0.73 0.31 -0.32
42 AT3G26100 Regulator of chromosome condensation (RCC1) family protein 0.73 0.3 -0.32
43 AT2G25760 Protein kinase family protein 0.73 0.31 -0.34
44 AT1G42470 Patched family protein 0.73 0.33 -0.32
45 AT1G50030 target of rapamycin target of rapamycin 0.73 0.34 -0.31
46 AT1G03110 Transducin/WD40 repeat-like superfamily protein AtTRM82, tRNA modification 82 -0.73 0.32 -0.32
47 AT3G02850 STELAR K+ outward rectifier STELAR K+ outward rectifier -0.72 0.32 -0.33
48 AT3G44780 Cysteine proteinases superfamily protein -0.72 0.3 -0.35
49 AT5G24740 Protein of unknown function (DUF1162) 0.72 0.31 -0.31
50 AT1G30490 Homeobox-leucine zipper family protein / lipid-binding
START domain-containing protein		 ATHB9, PHAVOLUTA 0.72 0.31 -0.33
51 AT3G46940 DUTP-PYROPHOSPHATASE-LIKE 1 DUTP-PYROPHOSPHATASE-LIKE 1 -0.72 0.31 -0.34
52 AT1G58230 binding 0.72 0.32 -0.31
53 AT3G05210 nucleotide repair protein, putative ERCC1, UV REPAIR DEFICIENT 7 0.72 0.32 -0.3
54 AT4G01290 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; Has 1744
Blast hits to 1308 proteins in 219 species: Archae - 0;
Bacteria - 241; Metazoa - 793; Fungi - 253; Plants - 108;
Viruses - 0; Other Eukaryotes - 349 (source: NCBI BLink).		 0.72 0.31 -0.33
55 AT3G61620 3'-5'-exoribonuclease family protein RRP41 -0.72 0.29 -0.33
56 AT4G17140 pleckstrin homology (PH) domain-containing protein 0.72 0.32 -0.28
57 AT1G17680 tetratricopeptide repeat (TPR)-containing protein 0.72 0.34 -0.3
58 AT3G17780 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
intracellular protein transport; LOCATED IN: endomembrane
system, integral to membrane, endoplasmic reticulum;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: B-cell
receptor-associated 31-like (InterPro:IPR008417); BEST
Arabidopsis thaliana protein match is: B-cell
receptor-associated 31-like (TAIR:AT1G48440.1); Has 102
Blast hits to 102 proteins in 17 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 102; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.72 0.31 -0.32
59 AT1G04190 Tetratricopeptide repeat (TPR)-like superfamily protein tetratricopeptide repeat 3 -0.72 0.31 -0.31
60 AT5G02880 ubiquitin-protein ligase 4 ubiquitin-protein ligase 4 0.72 0.33 -0.31
61 AT4G37460 Tetratricopeptide repeat (TPR)-like superfamily protein SUPPRESSOR OF RPS4-RLD 1 0.72 0.3 -0.34
62 AT1G03060 Beige/BEACH domain ;WD domain, G-beta repeat protein SPIRRIG 0.72 0.31 -0.32
63 AT4G01290 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; Has 1744
Blast hits to 1308 proteins in 219 species: Archae - 0;
Bacteria - 241; Metazoa - 793; Fungi - 253; Plants - 108;
Viruses - 0; Other Eukaryotes - 349 (source: NCBI BLink).		 0.72 0.32 -0.3
64 AT5G35180 Protein of unknown function (DUF1336) 0.72 0.33 -0.33
65 AT5G50780 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
family protein		 0.71 0.32 -0.3
66 AT1G04480 Ribosomal protein L14p/L23e family protein -0.71 0.31 -0.29
67 AT1G36510 Nucleic acid-binding proteins superfamily 0.71 0.3 -0.3
68 AT5G27970 ARM repeat superfamily protein 0.71 0.3 -0.32
69 AT5G52410 CONTAINS InterPro DOMAIN/s: S-layer homology domain
(InterPro:IPR001119); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G23890.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.71 0.31 -0.31
70 AT5G11700 LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: glycine-rich protein
(TAIR:AT4G32920.3); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.71 0.33 -0.33
71 AT4G34040 RING/U-box superfamily protein 0.71 0.29 -0.36
72 AT3G08850 HEAT repeat ;WD domain, G-beta repeat protein protein ATRAPTOR1B, RAPTOR1, RAPTOR1B 0.71 0.31 -0.29
73 AT3G27870 ATPase E1-E2 type family protein / haloacid
dehalogenase-like hydrolase family protein		 0.71 0.3 -0.34
74 AT2G36850 glucan synthase-like 8 GLUCAN SYNTHASE-LIKE 8, ATGSL8,
CHORUS, GSL08, glucan
synthase-like 8		 0.71 0.3 -0.3
75 AT5G19310 Homeotic gene regulator 0.71 0.32 -0.3
76 AT2G33600 NAD(P)-binding Rossmann-fold superfamily protein -0.7 0.31 -0.33
77 AT3G47380 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.7 0.31 -0.32
78 AT2G46930 Pectinacetylesterase family protein -0.7 0.3 -0.3
79 AT4G38350 Patched family protein 0.7 0.34 -0.29
80 AT1G05350 NAD(P)-binding Rossmann-fold superfamily protein -0.7 0.33 -0.32
81 AT3G02260 auxin transport protein (BIG) ATTENUATED SHADE AVOIDANCE 1, BIG,
CORYMBOSA1, DARK OVER-EXPRESSION
OF CAB 1, LOW PHOSPHATE-RESISTANT
ROOT 1, TRANSPORT INHIBITOR
RESPONSE 3, UMBRELLA 1		 0.7 0.31 -0.3
82 AT5G65620 Zincin-like metalloproteases family protein 0.7 0.31 -0.32
83 AT5G58030 Transport protein particle (TRAPP) component -0.7 0.31 -0.31
84 AT3G63180 TIC-like TICKLE, TIC-like 0.7 0.31 -0.34
85 AT5G23110 Zinc finger, C3HC4 type (RING finger) family protein 0.69 0.3 -0.31
86 AT1G80560 isopropylmalate dehydrogenase 2 ARABIDOPSIS ISOPROPYLMALATE
DEHYDROGENASE 2, isopropylmalate
dehydrogenase 2		 -0.69 0.3 -0.32
87 AT4G00550 digalactosyl diacylglycerol deficient 2 digalactosyl diacylglycerol
deficient 2		 0.69 0.31 -0.33
88 AT1G69030 BSD domain-containing protein -0.69 0.31 -0.31
89 AT3G61710 AUTOPHAGY 6 ATATG6, AtBECLIN1, AUTOPHAGY 6,
BECLIN1		 0.69 0.32 -0.31
90 AT2G14520 CBS domain-containing protein with a domain of unknown
function (DUF21)		 0.69 0.34 -0.33
91 AT1G76550 Phosphofructokinase family protein -0.69 0.33 -0.32
92 AT5G58040 homolog of yeast FIP1 [V] homolog of yeast FIP1 [V],
ATFIPS5, homolog of yeast FIP1
[V], FIPS5		 0.69 0.33 -0.31
93 AT1G26340 cytochrome B5 isoform A ARABIDOPSIS CYTOCHROME B5 ISOFORM
A, B5 #6, cytochrome B5 isoform A		 -0.69 0.31 -0.32
94 AT1G79830 golgin candidate 5 golgin candidate 5 0.69 0.3 -0.29
95 AT5G13690 alpha-N-acetylglucosaminidase family / NAGLU family CYCLOPS 1,
N-ACETYL-GLUCOSAMINIDASE		 0.69 0.33 -0.31
96 AT1G02360 Chitinase family protein -0.69 0.28 -0.32
97 AT4G12490 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.69 0.3 -0.33
98 AT5G28510 beta glucosidase 24 beta glucosidase 24 0.69 0.34 -0.33
99 AT5G40340 Tudor/PWWP/MBT superfamily protein 0.68 0.31 -0.33
100 AT5G03970 F-box associated ubiquitination effector family protein -0.68 0.31 -0.29
101 AT1G76460 RNA-binding (RRM/RBD/RNP motifs) family protein 0.68 0.32 -0.31
102 AT1G78460 SOUL heme-binding family protein -0.68 0.29 -0.3
103 AT4G38060 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G65480.1); Has 63 Blast hits
to 63 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.68 0.3 -0.32
104 AT2G47410 WD40/YVTN repeat-like-containing domain;Bromodomain 0.68 0.32 -0.32
105 AT3G57300 INO80 ortholog INO80 ORTHOLOG, INO80 ortholog 0.68 0.32 -0.31
106 AT3G56800 calmodulin 3 CALMODULIN 3, calmodulin 3 -0.68 0.32 -0.32
107 AT2G36810 ARM repeat superfamily protein 0.68 0.31 -0.3
108 AT5G23290 prefoldin 5 prefoldin 5 -0.68 0.3 -0.31
109 AT5G03300 adenosine kinase 2 adenosine kinase 2 -0.68 0.3 -0.32
110 AT1G55325 RNA polymerase II transcription mediators GRAND CENTRAL, MACCHI-BOU 2 0.68 0.33 -0.3
111 AT1G08470 strictosidine synthase-like 3 strictosidine synthase-like 3 -0.68 0.32 -0.3
112 AT5G16520 unknown protein; Has 25 Blast hits to 25 proteins in 9
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.68 0.32 -0.31
113 AT5G65930 kinesin-like calmodulin-binding protein (ZWICHEL) KINESIN-LIKE CALMODULIN-BINDING
PROTEIN, POTATO KINESIN-LIKE
CALMODULIN-BINDING PROTEIN,
ZWICHEL		 0.68 0.3 -0.31
114 AT4G36980 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Splicing factor, suppressor of white
apricot (InterPro:IPR019147); Has 7672 Blast hits to 5479
proteins in 321 species: Archae - 0; Bacteria - 89; Metazoa
- 5155; Fungi - 712; Plants - 341; Viruses - 39; Other
Eukaryotes - 1336 (source: NCBI BLink).		 0.68 0.32 -0.31
115 AT3G19360 Zinc finger (CCCH-type) family protein -0.68 0.32 -0.33
116 AT2G46560 transducin family protein / WD-40 repeat family protein 0.68 0.3 -0.33
117 AT3G53890 Ribosomal protein S21e -0.67 0.32 -0.31
118 AT4G09550 AtGCP3 interacting protein 1 ARABIDOPSIS ATGCP3 INTERACTING
PROTEIN 1, AtGCP3 interacting
protein 1		 -0.67 0.31 -0.3
119 AT1G65390 phloem protein 2 A5 phloem protein 2 A5, phloem
protein 2 A5		 -0.67 0.35 -0.33
120 AT1G73250 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase 1 ACTIVATING TRANSCRIPTION FACTOR 5,
GDP-4-keto-6-deoxymannose-3,5-epim
erase-4-reductase 1		 -0.67 0.32 -0.32
121 AT3G55730 myb domain protein 109 myb domain protein 109, myb domain
protein 109		 -0.67 0.31 -0.32
122 AT1G54260 winged-helix DNA-binding transcription factor family
protein		 0.67 0.3 -0.31
123 AT5G27150 Na+/H+ exchanger 1 AT-NHX1, ATNHX, ATNHX1, Na+/H+
exchanger 1		 0.67 0.35 -0.36
124 AT5G11000 Plant protein of unknown function (DUF868) -0.67 0.31 -0.32
125 AT1G75560 zinc knuckle (CCHC-type) family protein -0.67 0.32 -0.33
126 AT2G19430 DWD (DDB1-binding WD40 protein) hypersensitive to ABA 1 AtTHO6, DWD (DDB1-binding WD40
protein) hypersensitive to ABA 1,
THO6		 -0.67 0.34 -0.31
127 AT5G25080 Sas10/Utp3/C1D family -0.67 0.32 -0.33
128 AT1G17440 Transcription initiation factor TFIID subunit A CYTOKININ-HYPERSENSITIVE 1,
ENHANCED ETHYLENE RESPONSE 4,
TBP-ASSOCIATED FACTOR 12B		 0.67 0.33 -0.31
129 AT2G07360 SH3 domain-containing protein 0.67 0.31 -0.33
130 AT1G09420 glucose-6-phosphate dehydrogenase 4 glucose-6-phosphate dehydrogenase
4		 0.67 0.32 -0.31
131 AT1G45160 Protein kinase superfamily protein 0.67 0.31 -0.31
132 AT5G16240 Plant stearoyl-acyl-carrier-protein desaturase family
protein		 -0.67 0.33 -0.31
133 AT5G14790 ARM repeat superfamily protein -0.67 0.32 -0.32
134 AT3G62840 Small nuclear ribonucleoprotein family protein -0.67 0.29 -0.32
135 AT2G45540 WD-40 repeat family protein / beige-related 0.66 0.33 -0.32
136 AT3G12810 SNF2 domain-containing protein / helicase domain-containing
protein		 chr13, PHOTOPERIOD-INDEPENDENT
EARLY FLOWERING 1, SRCAP		 0.66 0.31 -0.3
137 AT5G55390 ENHANCED DOWNY MILDEW 2 ENHANCED DOWNY MILDEW 2 0.66 0.32 -0.32
138 AT2G43640 Signal recognition particle, SRP9/SRP14 subunit -0.66 0.32 -0.3
139 AT1G08780 ABI3-interacting protein 3 ABI3-interacting protein 3,
PREFOLDIN 4		 -0.66 0.31 -0.32
140 AT3G43810 calmodulin 7 calmodulin 7 -0.66 0.34 -0.33
141 AT2G24490 replicon protein A2 ATRPA2, ATRPA32A, SUPPRESSOR OF
ROS1, replicon protein A2, RPA32A		 -0.66 0.33 -0.33
142 AT1G55250 histone mono-ubiquitination 2 histone mono-ubiquitination 2 0.66 0.3 -0.32
143 AT4G28440 Nucleic acid-binding, OB-fold-like protein -0.66 0.32 -0.31
144 AT1G67140 HEAT repeat-containing protein SWEETIE 0.66 0.34 -0.32
145 AT4G18130 phytochrome E phytochrome E 0.66 0.31 -0.31
146 AT5G55940 Uncharacterised protein family (UPF0172) embryo defective 2731 -0.66 0.32 -0.31
147 AT1G13380 Protein of unknown function (DUF1218) -0.66 0.3 -0.31
148 AT4G00450 RNA polymerase II transcription mediators CENTER CITY, CRYPTIC PRECOCIOUS 0.66 0.31 -0.31
149 AT2G13370 chromatin remodeling 5 chromatin remodeling 5 0.66 0.3 -0.32
150 AT2G36960 TSL-kinase interacting protein 1 TSL-kinase interacting protein 1 0.66 0.3 -0.29
151 AT4G32605 Mitochondrial glycoprotein family protein -0.66 0.32 -0.29
152 AT1G09910 Rhamnogalacturonate lyase family protein 0.66 0.31 -0.31
153 AT3G61140 26S proteasome, regulatory subunit Rpn7;Proteasome
component (PCI) domain		 ARABIDOPSIS THALIANA FUSCA 6,
SHAGGY-LIKE KINASE 31,
CONSTITUTIVE PHOTOMORPHOGENIC 11,
COP9 SIGNALOSOME SUBUNIT 1, EMBRYO
DEFECTIVE 78, FUSCA 6, SHAGGY-LIKE
KINASE 31		 -0.66 0.33 -0.33
154 AT3G59650 mitochondrial ribosomal protein L51/S25/CI-B8 family
protein		 -0.66 0.31 -0.32
155 AT3G55380 ubiquitin-conjugating enzyme 14 ubiquitin-conjugating enzyme 14 -0.66 0.3 -0.3
156 AT5G24840 tRNA (guanine-N-7) methyltransferase -0.65 0.31 -0.32
157 AT1G78370 glutathione S-transferase TAU 20 glutathione S-transferase TAU 20,
glutathione S-transferase TAU 20		 -0.65 0.3 -0.31
158 AT5G37890 Protein with RING/U-box and TRAF-like domains -0.65 0.33 -0.32
159 AT3G10700 galacturonic acid kinase galacturonic acid kinase -0.65 0.31 -0.33
160 AT5G19630 alpha/beta-Hydrolases superfamily protein -0.65 0.35 -0.3
161 AT5G05010 clathrin adaptor complexes medium subunit family protein -0.65 0.3 -0.33
162 AT4G24240 WRKY DNA-binding protein 7 ATWRKY7, WRKY DNA-binding protein
7		 -0.65 0.33 -0.32
163 AT3G19930 sugar transporter 4 SUGAR TRANSPORTER 4, sugar
transporter 4		 -0.65 0.31 -0.31
164 AT3G12370 Ribosomal protein L10 family protein -0.65 0.31 -0.31
165 AT4G20780 calmodulin like 42 calmodulin like 42 -0.64 0.31 -0.31
166 AT2G03780 Translin family protein -0.64 0.33 -0.33
167 AT3G49720 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, Golgi apparatus, plasma
membrane, membrane; EXPRESSED IN: 25 plant structures;
EXPRESSED DURING: 15 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G65810.1); Has 64 Blast hits to 64 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.64 0.32 -0.3
168 AT5G23010 methylthioalkylmalate synthase 1 2-ISOPROPYLMALATE SYNTHASE 3,
methylthioalkylmalate synthase 1		 -0.64 0.31 -0.32
169 AT2G38870 Serine protease inhibitor, potato inhibitor I-type family
protein		 -0.64 0.32 -0.33
170 AT2G45860 unknown protein; Has 32 Blast hits to 32 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.64 0.3 -0.3
171 AT4G00300 fringe-related protein -0.64 0.3 -0.29
172 AT5G51400 PLAC8 family protein -0.64 0.32 -0.32
173 AT1G76300 snRNP core protein SMD3 snRNP core protein SMD3 -0.64 0.31 -0.32
174 AT3G15710 Peptidase S24/S26A/S26B/S26C family protein -0.64 0.34 -0.29
175 AT1G72170 Domain of unknown function (DUF543) -0.64 0.31 -0.33
176 AT1G10590 Nucleic acid-binding, OB-fold-like protein -0.64 0.31 -0.31
177 AT2G47320 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 -0.64 0.32 -0.33
178 AT2G19760 profilin 1 PROFILIN 1, profilin 1 -0.64 0.3 -0.31
179 AT1G26840 origin recognition complex protein 6 ARABIDOPSIS THALIANA ORIGIN
RECOGNITION COMPLEX PROTEIN 6,
origin recognition complex protein
6		 -0.64 0.31 -0.31
180 AT3G48490 unknown protein; Has 16 Blast hits to 16 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 1;
Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.64 0.32 -0.32
181 AT4G22140 PHD finger family protein / bromo-adjacent homology (BAH)
domain-containing protein		 EARLY BOLTING IN SHORT DAYS -0.64 0.32 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
182 C0258 Tryptophan amide (NH3+) D,L-Tryptophan amide (NH3+) - - 0.78 0.48 -0.43
183 C0123 Isoleucine D,L-Isoleucine L-Isoleucine tRNA charging,
isoleucine biosynthesis I (from threonine),
jasmonoyl-amino acid conjugates biosynthesis I,
isoleucine degradation I 		0.77 0.45 -0.43 C0123