AT2G20180 : PHY-INTERACTING FACTOR 1
Query Information
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AGICode AT2G20180
Description phytochrome interacting factor 3-like 5
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G20180 phytochrome interacting factor 3-like 5 PHY-INTERACTING FACTOR 1,
phytochrome interacting factor
3-like 5		 1 0.33 -0.31
2 AT2G01760 response regulator 14 response regulator 14, response
regulator 14		 0.88 0.32 -0.31
3 AT1G17170 glutathione S-transferase TAU 24 glutathione S-transferase TAU 24,
Arabidopsis thaliana Glutathione
S-transferase (class tau) 24,
glutathione S-transferase TAU 24		 -0.84 0.32 -0.32
4 AT1G70100 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G24160.2); Has 3037 Blast hits
to 2309 proteins in 344 species: Archae - 6; Bacteria -
672; Metazoa - 1089; Fungi - 230; Plants - 220; Viruses -
37; Other Eukaryotes - 783 (source: NCBI BLink).		 0.84 0.32 -0.31
5 AT3G09270 glutathione S-transferase TAU 8 glutathione S-transferase TAU 8,
glutathione S-transferase TAU 8		 -0.83 0.34 -0.31
6 AT1G50280 Phototropic-responsive NPH3 family protein 0.83 0.31 -0.31
7 AT3G32930 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast envelope; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 57 Blast hits to 57
proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.83 0.33 -0.33
8 AT2G46710 Rho GTPase activating protein with PAK-box/P21-Rho-binding
domain		 0.83 0.31 -0.32
9 AT3G47780 ABC2 homolog 6 ATP-binding cassette A7, A.
THALIANA ABC2 HOMOLOG 6, ABC2
homolog 6		 -0.82 0.3 -0.31
10 AT3G08950 electron transport SCO1/SenC family protein homologue of the copper chaperone
SCO1		 -0.82 0.3 -0.3
11 AT2G39930 isoamylase 1 ARABIDOPSIS THALIANA ISOAMYLASE 1,
isoamylase 1		 0.81 0.3 -0.3
12 AT1G17180 glutathione S-transferase TAU 25 glutathione S-transferase TAU 25,
glutathione S-transferase TAU 25		 -0.8 0.33 -0.3
13 AT1G14840 microtubule-associated proteins 70-4 microtubule-associated proteins
70-4, microtubule-associated
proteins 70-4		 0.8 0.34 -0.31
14 AT3G27380 succinate dehydrogenase 2-1 succinate dehydrogenase 2-1 -0.8 0.31 -0.32
15 AT3G07310 Protein of unknown function (DUF760) 0.8 0.32 -0.33
16 AT1G18650 plasmodesmata callose-binding protein 3 plasmodesmata callose-binding
protein 3		 0.8 0.33 -0.32
17 AT3G26470 Powdery mildew resistance protein, RPW8 domain -0.8 0.28 -0.3
18 AT4G37080 Protein of unknown function, DUF547 0.8 0.32 -0.31
19 AT2G36050 ovate family protein 15 ARABIDOPSIS THALIANA OVATE FAMILY
PROTEIN 15, ovate family protein
15		 0.8 0.3 -0.31
20 AT1G17140 interactor of constitutive active rops 1 interactor of constitutive active
rops 1, ROP INTERACTIVE PARTNER 1		 0.79 0.32 -0.34
21 AT1G02800 cellulase 2 cellulase 2, CEL2, cellulase 2 0.79 0.32 -0.34
22 AT5G24000 Protein of unknown function (DUF819) 0.79 0.32 -0.34
23 AT5G54630 zinc finger protein-related 0.79 0.33 -0.33
24 AT1G68780 RNI-like superfamily protein 0.79 0.31 -0.33
25 AT4G23885 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G24165.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.79 0.33 -0.3
26 AT4G23470 PLAC8 family protein -0.79 0.29 -0.32
27 AT5G07240 IQ-domain 24 IQ-domain 24 0.79 0.31 -0.33
28 AT2G17290 Calcium-dependent protein kinase family protein ARABIDOPSIS THALIANA
CALMODULIN-DOMAIN PROTEIN KINASE
3, ARABIDOPSIS THALIANA
CALCIUM-DEPENDENT PROTEIN KINASE
6, calcium dependent protein
kinase 6		 -0.78 0.3 -0.33
29 AT5G46690 beta HLH protein 71 beta HLH protein 71 0.78 0.31 -0.3
30 AT1G04850 ubiquitin-associated (UBA)/TS-N domain-containing protein -0.78 0.31 -0.31
31 AT5G13410 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.78 0.32 -0.32
32 AT1G09300 Metallopeptidase M24 family protein -0.78 0.32 -0.3
33 AT1G24764 microtubule-associated proteins 70-2 microtubule-associated proteins
70-2, microtubule-associated
proteins 70-2		 0.78 0.3 -0.32
34 AT5G40760 glucose-6-phosphate dehydrogenase 6 glucose-6-phosphate dehydrogenase
6		 -0.78 0.3 -0.32
35 AT5G55070 Dihydrolipoamide succinyltransferase -0.78 0.32 -0.31
36 AT2G43010 phytochrome interacting factor 4 AtPIF4, phytochrome interacting
factor 4, SRL2		 0.78 0.32 -0.34
37 AT2G43780 unknown protein; Has 30 Blast hits to 30 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.78 0.32 -0.31
38 AT4G13830 DNAJ-like 20 DNAJ-like 20 0.77 0.32 -0.3
39 AT2G47000 ATP binding cassette subfamily B4 ATP-binding cassette B4,
ARABIDOPSIS P-GLYCOPROTEIN 4,
MULTIDRUG RESISTANCE 4,
P-GLYCOPROTEIN 4		 -0.77 0.3 -0.33
40 AT1G18480 Calcineurin-like metallo-phosphoesterase superfamily
protein		 AtSLP2, Shewenella-like protein
phosphatase 2		 -0.77 0.32 -0.31
41 AT2G01420 Auxin efflux carrier family protein ARABIDOPSIS PIN-FORMED 4,
PIN-FORMED 4		 0.77 0.32 -0.31
42 AT5G42150 Glutathione S-transferase family protein -0.77 0.3 -0.31
43 AT3G26932 dsRNA-binding protein 3 dsRNA-binding protein 3 0.77 0.33 -0.31
44 AT3G28130 nodulin MtN21 /EamA-like transporter family protein 0.77 0.32 -0.33
45 AT1G76110 HMG (high mobility group) box protein with ARID/BRIGHT
DNA-binding domain		 0.77 0.32 -0.34
46 AT3G52155 Phosphoglycerate mutase family protein 0.77 0.33 -0.32
47 AT2G22890 Kua-ubiquitin conjugating enzyme hybrid localisation domain 0.77 0.32 -0.3
48 AT1G20650 Protein kinase superfamily protein ALTERED SEED GERMINATION 5 0.77 0.32 -0.34
49 AT4G15560 Deoxyxylulose-5-phosphate synthase AtCLA1, CLA, CLOROPLASTOS
ALTERADOS 1, DEF,
1-DEOXY-D-XYLULOSE 5-PHOSPHATE
SYNTHASE 2, 1-DEOXY-D-XYLULOSE
5-PHOSPHATE SYNTHASE		 0.76 0.31 -0.31
50 AT5G64860 disproportionating enzyme disproportionating enzyme 0.76 0.31 -0.31
51 AT4G09670 Oxidoreductase family protein 0.76 0.31 -0.29
52 AT1G51820 Leucine-rich repeat protein kinase family protein -0.76 0.32 -0.31
53 AT1G55360 Protein of Unknown Function (DUF239) 0.76 0.33 -0.32
54 AT1G64750 deletion of SUV3 suppressor 1(I) deletion of SUV3 suppressor 1(I),
deletion of SUV3 suppressor 1(I)		 -0.76 0.32 -0.32
55 AT5G04530 3-ketoacyl-CoA synthase 19 3-ketoacyl-CoA synthase 19 0.76 0.32 -0.34
56 AT3G27020 YELLOW STRIPE like 6 YELLOW STRIPE like 6 0.76 0.33 -0.31
57 AT3G17240 lipoamide dehydrogenase 2 lipoamide dehydrogenase 2 -0.75 0.32 -0.33
58 AT4G37550 Acetamidase/Formamidase family protein 0.75 0.3 -0.3
59 AT5G37600 glutamine synthase clone R1 ARABIDOPSIS GLUTAMINE SYNTHASE
1;1, ARABIDOPSIS THALIANA
GLUTAMINE SYNTHASE CLONE R1,
GLUTAMINE SYNTHASE 1;1, glutamine
synthase clone R1		 -0.75 0.31 -0.32
60 AT1G67910 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 12 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G24577.1); Has 167 Blast
hits to 167 proteins in 19 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.75 0.3 -0.32
61 AT1G09560 germin-like protein 5 germin-like protein 5 -0.75 0.32 -0.31
62 AT4G35920 PLAC8 family protein mid1-complementing activity 1 0.75 0.3 -0.31
63 AT4G09900 methyl esterase 12 ARABIDOPSIS THALIANA METHYL
ESTERASE 12, methyl esterase 12		 0.75 0.33 -0.31
64 AT4G01460 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.75 0.31 -0.31
65 AT4G39900 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.75 0.34 -0.32
66 AT5G49480 Ca2+-binding protein 1 Ca2+-binding protein 1,
Ca2+-binding protein 1		 -0.75 0.32 -0.32
67 AT1G65900 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; Has 306 Blast hits to
306 proteins in 119 species: Archae - 19; Bacteria - 238;
Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other
Eukaryotes - 15 (source: NCBI BLink).		 0.75 0.31 -0.31
68 AT2G22670 indoleacetic acid-induced protein 8 indoleacetic acid-induced protein
8		 0.74 0.32 -0.31
69 AT2G24790 CONSTANS-like 3 ATCOL3, CONSTANS-like 3 0.74 0.32 -0.33
70 AT2G04040 MATE efflux family protein ATDTX1, detoxification 1, TX1 -0.74 0.34 -0.3
71 AT3G54790 ARM repeat superfamily protein 0.74 0.31 -0.31
72 AT5G03290 isocitrate dehydrogenase V isocitrate dehydrogenase V -0.74 0.34 -0.32
73 AT2G45590 Protein kinase superfamily protein 0.74 0.35 -0.32
74 AT3G27240 Cytochrome C1 family -0.74 0.33 -0.33
75 AT3G18035 winged-helix DNA-binding transcription factor family
protein		 HON4 0.74 0.32 -0.32
76 AT4G37910 mitochondrial heat shock protein 70-1 mitochondrial heat shock protein
70-1		 -0.74 0.3 -0.32
77 AT5G51830 pfkB-like carbohydrate kinase family protein -0.74 0.31 -0.32
78 AT1G48300 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; Has 96 Blast hits to 87
proteins in 37 species: Archae - 0; Bacteria - 2; Metazoa -
12; Fungi - 2; Plants - 65; Viruses - 0; Other Eukaryotes -
15 (source: NCBI BLink).		 0.74 0.33 -0.32
79 AT5G51570 SPFH/Band 7/PHB domain-containing membrane-associated
protein family		 -0.74 0.3 -0.31
80 AT5G54980 Uncharacterised protein family (UPF0497) 0.74 0.28 -0.32
81 AT2G03550 alpha/beta-Hydrolases superfamily protein 0.74 0.31 -0.3
82 AT4G08920 cryptochrome 1 ATCRY1, BLUE LIGHT UNINHIBITED 1,
cryptochrome 1, ELONGATED
HYPOCOTYL 4, OUT OF PHASE 2		 0.74 0.32 -0.32
83 AT4G32060 calcium-binding EF hand family protein 0.74 0.32 -0.31
84 AT4G25900 Galactose mutarotase-like superfamily protein -0.73 0.32 -0.34
85 AT4G19460 UDP-Glycosyltransferase superfamily protein -0.73 0.32 -0.33
86 AT4G26910 Dihydrolipoamide succinyltransferase -0.73 0.32 -0.31
87 AT5G40650 succinate dehydrogenase 2-2 succinate dehydrogenase 2-2 -0.73 0.32 -0.32
88 AT4G39690 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: mitochondrion;
EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14
growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial
inner membrane protein Mitofilin (InterPro:IPR019133); Has
30201 Blast hits to 17322 proteins in 780 species: Archae -
12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants
- 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.73 0.32 -0.31
89 AT4G10040 cytochrome c-2 cytochrome c-2 -0.73 0.3 -0.34
90 AT4G01660 ABC transporter 1 ABC transporter 1, ABC transporter
1, ATATH10		 -0.73 0.32 -0.3
91 AT5G57300 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.73 0.3 -0.34
92 AT4G31810 ATP-dependent caseinolytic (Clp) protease/crotonase family
protein		 -0.73 0.32 -0.31
93 AT1G78340 glutathione S-transferase TAU 22 glutathione S-transferase TAU 22,
glutathione S-transferase TAU 22		 -0.73 0.33 -0.31
94 AT2G37250 adenosine kinase adenosine kinase, ATPADK1 -0.72 0.32 -0.33
95 AT4G34200 D-3-phosphoglycerate dehydrogenase embryo sac development arrest 9 -0.72 0.32 -0.3
96 AT3G01280 voltage dependent anion channel 1 ARABIDOPSIS THALIANA VOLTAGE
DEPENDENT ANION CHANNEL 1, voltage
dependent anion channel 1		 -0.72 0.31 -0.32
97 AT2G47380 Cytochrome c oxidase subunit Vc family protein -0.72 0.31 -0.35
98 AT1G07030 Mitochondrial substrate carrier family protein -0.72 0.33 -0.32
99 AT5G22890 C2H2 and C2HC zinc fingers superfamily protein -0.72 0.3 -0.31
100 AT2G31060 elongation factor family protein EMBRYO DEFECTIVE 2785 -0.72 0.33 -0.32
101 AT1G51710 ubiquitin-specific protease 6 ATUBP6, ubiquitin-specific
protease 6		 -0.71 0.31 -0.29
102 AT4G26970 aconitase 2 aconitase 2 -0.71 0.33 -0.32
103 AT3G20510 Transmembrane proteins 14C -0.71 0.31 -0.29
104 AT4G00860 Protein of unknown function (DUF1138) Arabidopsis thaliana ozone-induced
protein 1, ATOZI1		 -0.71 0.31 -0.3
105 AT1G24180 Thiamin diphosphate-binding fold (THDP-binding) superfamily
protein		 IAA-CONJUGATE-RESISTANT 4 -0.71 0.3 -0.32
106 AT5G09590 mitochondrial HSO70 2 HEAT SHOCK COGNATE, mitochondrial
HSO70 2		 -0.71 0.3 -0.34
107 AT5G11260 Basic-leucine zipper (bZIP) transcription factor family
protein		 ELONGATED HYPOCOTYL 5, REVERSAL OF
THE DET PHENOTYPE 5		 -0.71 0.32 -0.33
108 AT5G49810 methionine S-methyltransferase methionine S-methyltransferase -0.7 0.33 -0.31
109 AT1G09100 26S proteasome AAA-ATPase subunit RPT5B 26S proteasome AAA-ATPase subunit
RPT5B		 -0.7 0.32 -0.31
110 AT2G18690 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
membrane; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF975 (InterPro:IPR010380);
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT2G18680.1); Has 213 Blast hits to 211 proteins in
20 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi -
0; Plants - 205; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.7 0.3 -0.31
111 AT2G43535 Scorpion toxin-like knottin superfamily protein -0.7 0.3 -0.29
112 AT1G22800 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.69 0.3 -0.32
113 AT3G54960 PDI-like 1-3 ARABIDOPSIS THALIANA PROTEIN
DISULFIDE ISOMERASE 1, PDI-like
1-3, PROTEIN DISULFIDE ISOMERASE
1, PDI-like 1-3		 -0.69 0.3 -0.33
114 AT3G13790 Glycosyl hydrolases family 32 protein ATBFRUCT1, ARABIDOPSIS THALIANA
CELL WALL INVERTASE 1		 -0.69 0.3 -0.28
115 AT5G26860 lon protease 1 lon protease 1, LON_ARA_ARA -0.69 0.32 -0.3
116 AT1G67810 sulfur E2 sulfur E2 -0.69 0.3 -0.31
117 AT5G22060 DNAJ homologue 2 ARABIDOPSIS THALIANA DNAJ
HOMOLOGUE 2, DNAJ homologue 2		 -0.69 0.32 -0.31
118 AT5G13490 ADP/ATP carrier 2 ADP/ATP carrier 2 -0.69 0.32 -0.31
119 AT2G31180 myb domain protein 14 ARABIDOPSIS THALIANA MYB DOMAIN
PROTEIN 14, myb domain protein 14,
MYB14AT		 -0.68 0.29 -0.29
120 AT5G56350 Pyruvate kinase family protein -0.68 0.31 -0.34
121 AT2G20390 unknown protein; Has 50 Blast hits to 50 proteins in 18
species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0;
Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.68 0.29 -0.31
122 AT4G08390 stromal ascorbate peroxidase stromal ascorbate peroxidase -0.68 0.32 -0.32
123 AT4G35060 Heavy metal transport/detoxification superfamily protein heavy metal associated
isoprenylated plant protein 25		 -0.68 0.29 -0.33
124 AT4G27500 proton pump interactor 1 proton pump interactor 1 -0.68 0.31 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
125 C0167 MST_1744.8 - - - 0.85 0.45 -0.44
126 C0153 Monogalactosyldiacylgycerol-34:6 - a Monogalactosyldiacylgycerol glycolipid biosynthesis,
triacylglycerol degradation,
linoleate biosynthesis I,
glutathione redox reactions I 		0.78 0.47 -0.44 C0153