AT2G20060 : -
Query Information
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AGICode AT2G20060
Description Ribosomal protein L4/L1 family
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G20060 Ribosomal protein L4/L1 family 1 0.29 -0.3
2 AT3G14600 Ribosomal protein L18ae/LX family protein 0.78 0.31 -0.31
3 AT5G09270 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.76 0.29 -0.3
4 AT5G43720 Protein of unknown function (DUF2361) 0.71 0.33 -0.33
5 AT4G22212 Arabidopsis defensin-like protein 0.71 0.3 -0.31
6 AT1G50370 Calcineurin-like metallo-phosphoesterase superfamily
protein		 AtFYPP1, flower- specific,
phytochrome-associated protein
phosphatase 1		 0.7 0.33 -0.33
7 AT1G22570 Major facilitator superfamily protein 0.69 0.3 -0.34
8 AT1G07210 Ribosomal protein S18 0.69 0.3 -0.3
9 AT5G26280 TRAF-like family protein 0.68 0.33 -0.31
10 AT1G52340 NAD(P)-binding Rossmann-fold superfamily protein ABA DEFICIENT 2, ARABIDOPSIS
THALIANA ABA DEFICIENT 2,
SHORT-CHAIN
DEHYDROGENASE/REDUCTASE 1, GLUCOSE
INSENSITIVE 1, IMPAIRED SUCROSE
INDUCTION 4, SHORT-CHAIN
DEHYDROGENASE REDUCTASE 1,
SUGAR-INSENSITIVE 4, SALT
RESISTANT 1		 -0.68 0.29 -0.32
11 AT4G26650 RNA-binding (RRM/RBD/RNP motifs) family protein 0.68 0.32 -0.3
12 AT2G30000 PHF5-like protein 0.67 0.31 -0.3
13 AT1G19715 Mannose-binding lectin superfamily protein -0.66 0.31 -0.32
14 AT5G47680 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA
(guanine-N1-)-methyltransferase (InterPro:IPR016009), tRNA
(guanine-N(1)-)-methyltransferase, metazoa
(InterPro:IPR016653), tRNA (guanine-N1-)-methyltransferase,
eukaryotic (InterPro:IPR007356); Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 AtTRM, tRNA modification 10 0.66 0.32 -0.31
15 AT2G30790 photosystem II subunit P-2 photosystem II subunit P-2 -0.66 0.31 -0.32
16 AT1G19835 Plant protein of unknown function (DUF869) -0.66 0.34 -0.32
17 AT1G52380 NUP50 (Nucleoporin 50 kDa) protein 0.66 0.32 -0.29
18 AT1G22060 LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: FBD, F-box and Leucine Rich
Repeat domains containing protein (TAIR:AT1G22000.1); Has
84739 Blast hits to 38714 proteins in 2257 species: Archae
- 1436; Bacteria - 11314; Metazoa - 40747; Fungi - 7706;
Plants - 4675; Viruses - 308; Other Eukaryotes - 18553
(source: NCBI BLink).		 -0.65 0.32 -0.31
19 AT5G27950 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.65 0.31 -0.31
20 AT1G76620 Protein of unknown function, DUF547 -0.65 0.32 -0.3
21 AT1G66680 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 AR401 0.64 0.33 -0.31
22 AT5G64760 regulatory particle non-ATPase subunit 5B regulatory particle non-ATPase
subunit 5B		 0.64 0.31 -0.31
23 AT2G18280 tubby like protein 2 tubby like protein 2, tubby like
protein 2		 -0.63 0.31 -0.31
24 AT2G46180 golgin candidate 4 golgin candidate 4 -0.63 0.33 -0.33
25 AT2G26590 regulatory particle non-ATPase 13 regulatory particle non-ATPase 13 0.63 0.29 -0.32
26 AT2G34900 Transcription factor GTE6 GTE01, GLOBAL TRANSCRIPTION FACTOR
GROUP E1, IMBIBITION-INDUCIBLE 1		 0.63 0.32 -0.32
27 AT4G17695 Homeodomain-like superfamily protein KANADI 3 -0.63 0.31 -0.32
28 AT4G24740 FUS3-complementing gene 2 FUS3-complementing gene 2, AME1,
FUS3-complementing gene 2		 -0.62 0.32 -0.3
29 AT2G15810 transposable element gene -0.61 0.31 -0.32
30 AT4G25330 unknown protein; Has 21 Blast hits to 21 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.6 0.32 -0.33
31 AT1G33070 MADS-box family protein -0.6 0.33 -0.32
32 AT3G47840 Tetratricopeptide repeat (TPR)-like superfamily protein 0.6 0.29 -0.29
33 AT3G58000 VQ motif-containing protein -0.58 0.31 -0.32
34 AT1G44990 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 -0.57 0.32 -0.3
35 AT4G24900 unknown protein; Has 119 Blast hits to 96 proteins in 40
species: Archae - 0; Bacteria - 0; Metazoa - 81; Fungi - 0;
Plants - 34; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 -0.55 0.33 -0.3
36 AT3G25440 RNA-binding CRS1 / YhbY (CRM) domain protein LAG One Homologue 1 -0.54 0.33 -0.3
37 AT2G28810 Dof-type zinc finger DNA-binding family protein -0.54 0.3 -0.32
38 AT1G74680 Exostosin family protein -0.54 0.31 -0.34
39 AT2G24160 pseudogene, leucine rich repeat protein family, contains
leucine rich-repeat domains Pfam:PF00560,
INTERPRO:IPR001611; contains some similarity to Cf-4
(Lycopersicon hirsutum) gi|2808683|emb|CAA05268; blastp
match of 37% identity and 8.4e-98 P-value to
GP|2808683|emb|CAA05268.1||AJ002235 Cf-4 {Lycopersicon
hirsutum}		 -0.54 0.32 -0.31
40 AT5G58830 Subtilisin-like serine endopeptidase family protein -0.54 0.33 -0.33
41 AT4G31630 Transcriptional factor B3 family protein -0.53 0.32 -0.34
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
42 C0148 Methionine D,L-Methionine L-Methionine thiamine biosynthesis II,
S-adenosyl-L-methionine biosynthesis,
S-adenosyl-L-methionine cycle II,
tRNA charging,
methionine degradation II,
ethylene biosynthesis I (plants),
methionine degradation I (to homocysteine),
S-methylmethionine cycle,
methionine salvage pathway,
methionine biosynthesis II,
folate transformations II,
homomethionine biosynthesis,
lipoate biosynthesis and incorporation I,
S-methyl-5-thio-alpha-D-ribose 1-phosphate degradation 		-0.67 0.33 -0.33 C0148