AGICode | AT2G27270 |
Description | BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT4G01410.1); Has 250 Blast hits to 250 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 250; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT2G27270 | BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT4G01410.1); Has 250 Blast hits to 250 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 250; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
1 | 0.3 | -0.32 | |||
2 | AT4G15720 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.6 | 0.31 | -0.31 | |||
3 | AT5G05200 | Protein kinase superfamily protein | -0.6 | 0.3 | -0.3 | |||
4 | AT2G21940 | shikimate kinase 1 | ATSK1, shikimate kinase 1 | -0.6 | 0.31 | -0.32 | ||
5 | AT2G14110 | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein |
-0.59 | 0.32 | -0.3 | |||
6 | AT5G16990 | Zinc-binding dehydrogenase family protein | -0.59 | 0.32 | -0.3 | |||
7 | AT3G60270 | Cupredoxin superfamily protein | 0.58 | 0.3 | -0.31 | |||
8 | AT5G10070 | RNase L inhibitor protein-related | -0.58 | 0.33 | -0.33 | |||
9 | AT2G07760 | Zinc knuckle (CCHC-type) family protein | 0.55 | 0.3 | -0.32 | |||
10 | AT2G36560 | AT hook motif DNA-binding family protein | 0.55 | 0.33 | -0.33 | |||
11 | AT2G23470 | Protein of unknown function, DUF647 | ROOT UV-B SENSITIVE 4 | -0.55 | 0.31 | -0.31 | ||
12 | AT1G10520 | DNA polymerase lambda (POLL) | AtPol{lambda}, DNA polymerase {lambda} |
-0.55 | 0.31 | -0.31 | ||
13 | AT4G01140 | Protein of unknown function (DUF1191) | 0.53 | 0.29 | -0.31 | |||
14 | AT5G64470 | Plant protein of unknown function (DUF828) | TRICHOME BIREFRINGENCE-LIKE 12 | -0.53 | 0.32 | -0.3 | ||
15 | AT1G50520 | cytochrome P450, family 705, subfamily A, polypeptide 27 | cytochrome P450, family 705, subfamily A, polypeptide 27 |
0.53 | 0.31 | -0.31 | ||
16 | AT2G17910 | transposable element gene | 0.53 | 0.35 | -0.33 | |||
17 | AT3G62080 | SNF7 family protein | -0.52 | 0.32 | -0.31 | |||
18 | AT5G62810 | peroxin 14 | ATPEX14, PEROXISOME DEFECTIVE 2, peroxin 14 |
-0.52 | 0.29 | -0.31 | ||
19 | AT1G11770 | FAD-binding Berberine family protein | 0.51 | 0.3 | -0.32 | |||
20 | AT2G42180 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). |
0.51 | 0.32 | -0.33 | |||
21 | AT1G48950 | C3HC zinc finger-like | 0.5 | 0.31 | -0.29 | |||
22 | AT4G15380 | cytochrome P450, family 705, subfamily A, polypeptide 4 | cytochrome P450, family 705, subfamily A, polypeptide 4 |
0.5 | 0.34 | -0.33 | ||
23 | AT3G42480 | transposable element gene | 0.5 | 0.33 | -0.32 | |||
24 | AT1G22010 | unknown protein; Has 12 Blast hits to 12 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 12; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.5 | 0.34 | -0.32 | |||
25 | AT4G15030 | CONTAINS InterPro DOMAIN/s: Folate-sensitive fragile site protein Fra10Ac1 (InterPro:IPR019129); Has 8455 Blast hits to 5700 proteins in 376 species: Archae - 6; Bacteria - 264; Metazoa - 3820; Fungi - 744; Plants - 645; Viruses - 76; Other Eukaryotes - 2900 (source: NCBI BLink). |
-0.5 | 0.3 | -0.31 | |||
26 | AT5G51800 | Protein kinase superfamily protein | -0.49 | 0.34 | -0.29 | |||
27 | AT5G17580 | Phototropic-responsive NPH3 family protein | -0.49 | 0.32 | -0.31 | |||
28 | AT3G11370 | Cysteine/Histidine-rich C1 domain family protein | 0.49 | 0.3 | -0.32 | |||
29 | AT2G17590 | Cysteine/Histidine-rich C1 domain family protein | 0.49 | 0.29 | -0.34 | |||
30 | AT5G38080 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G38090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.49 | 0.31 | -0.32 | |||
31 | AT2G15300 | Leucine-rich repeat protein kinase family protein | 0.49 | 0.35 | -0.29 | |||
32 | AT1G64000 | WRKY DNA-binding protein 56 | ATWRKY56, WRKY DNA-binding protein 56 |
0.49 | 0.33 | -0.32 | ||
33 | AT2G24830 | zinc finger (CCCH-type) family protein / D111/G-patch domain-containing protein |
-0.49 | 0.35 | -0.31 | |||
34 | AT3G58760 | Integrin-linked protein kinase family | -0.48 | 0.35 | -0.3 | |||
35 | AT2G26510 | Xanthine/uracil permease family protein | pigment defective embryo 135 | 0.48 | 0.33 | -0.29 | ||
36 | AT1G78510 | solanesyl diphosphate synthase 1 | solanesyl diphosphate synthase 1 | -0.48 | 0.28 | -0.31 | ||
37 | AT1G31470 | Major facilitator superfamily protein | NUCLEAR FUSION DEFECTIVE 4 | 0.47 | 0.31 | -0.31 | ||
38 | AT1G75050 | Pathogenesis-related thaumatin superfamily protein | -0.47 | 0.31 | -0.32 | |||
39 | AT4G08130 | transposable element gene | -0.47 | 0.33 | -0.34 | |||
40 | AT3G18720 | F-box family protein | 0.47 | 0.33 | -0.3 | |||
41 | AT5G07660 | structural maintenance of chromosomes 6A | structural maintenance of chromosomes 6A |
-0.47 | 0.31 | -0.31 | ||
42 | AT1G76950 | Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain |
PRAF1 | 0.47 | 0.31 | -0.31 | ||
43 | AT3G01020 | ISCU-like 2 | ISCU-LIKE 2, ISCU-like 2 | 0.47 | 0.33 | -0.3 | ||
44 | AT2G28460 | Cysteine/Histidine-rich C1 domain family protein | 0.47 | 0.31 | -0.33 | |||
45 | AT2G17310 | F-box and associated interaction domains-containing protein | SUPPRESSOR OF NIM1-1 1 | -0.47 | 0.32 | -0.31 | ||
46 | AT4G02195 | syntaxin of plants 42 | ATSYP42, ATTLG2B, syntaxin of plants 42, TLG2B |
-0.46 | 0.32 | -0.32 | ||
47 | AT2G14730 | transposable element gene | 0.46 | 0.29 | -0.32 | |||
48 | AT5G57480 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.46 | 0.32 | -0.32 | |||
49 | AT2G36740 | sequence-specific DNA binding transcription factors;DNA binding;DNA binding |
ATSWC2, SWC2 | -0.46 | 0.34 | -0.3 | ||
50 | AT2G34800 | unknown protein; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.46 | 0.32 | -0.31 | |||
51 | AT1G23250 | Caleosin-related family protein | 0.45 | 0.33 | -0.29 | |||
52 | AT5G62760 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.45 | 0.34 | -0.3 | |||
53 | AT5G09940 | Protein of unknown function (DUF1635) | -0.45 | 0.33 | -0.33 | |||
54 | AT3G57720 | Protein kinase superfamily protein | -0.44 | 0.31 | -0.3 | |||
55 | AT3G28190 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.44 | 0.32 | -0.31 | |||
56 | AT5G24900 | cytochrome P450, family 714, subfamily A, polypeptide 2 | cytochrome P450, family 714, subfamily A, polypeptide 2, EUI-like p450 A2 |
0.44 | 0.32 | -0.33 |