AT2G27285 : -
Query Information
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AGICode AT2G27285
Description Coiled-coil domain-containing protein 55 (DUF2040)
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G27285 Coiled-coil domain-containing protein 55 (DUF2040) 1 0.3 -0.32
2 AT2G15320 Leucine-rich repeat (LRR) family protein 0.77 0.32 -0.33
3 AT5G39570 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cytosol, nucleus;
EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14
growth stages; BEST Arabidopsis thaliana protein match is:
glycine-rich protein (TAIR:AT3G29075.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.76 0.32 -0.3
4 AT5G43560 TRAF-like superfamily protein 0.75 0.32 -0.34
5 AT1G47710 Serine protease inhibitor (SERPIN) family protein 0.75 0.34 -0.3
6 AT3G26730 RING/U-box superfamily protein 0.74 0.33 -0.31
7 AT1G14910 ENTH/ANTH/VHS superfamily protein 0.74 0.32 -0.32
8 AT1G56300 Chaperone DnaJ-domain superfamily protein 0.74 0.32 -0.31
9 AT1G53050 Protein kinase superfamily protein 0.73 0.31 -0.33
10 AT1G04300 TRAF-like superfamily protein 0.73 0.3 -0.34
11 AT3G15730 phospholipase D alpha 1 PLD, phospholipase D alpha 1 0.73 0.33 -0.3
12 AT1G65580 Endonuclease/exonuclease/phosphatase family protein FRAGILE FIBER3 0.72 0.33 -0.31
13 AT1G31870 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cytosol, nucleus; EXPRESSED IN: 25 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF2050,
pre-mRNA-splicing factor (InterPro:IPR018609); Has 13303
Blast hits to 9618 proteins in 489 species: Archae - 8;
Bacteria - 444; Metazoa - 7153; Fungi - 2294; Plants - 942;
Viruses - 128; Other Eukaryotes - 2334 (source: NCBI
BLink).		 0.72 0.31 -0.3
14 AT5G64590 BEST Arabidopsis thaliana protein match is: Putative
endonuclease or glycosyl hydrolase (TAIR:AT3G62200.1); Has
1807 Blast hits to 1807 proteins in 277 species: Archae -
0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.71 0.33 -0.32
15 AT2G29070 Ubiquitin fusion degradation UFD1 family protein 0.71 0.33 -0.31
16 AT3G18040 MAP kinase 9 MAP kinase 9 0.71 0.32 -0.31
17 AT3G01560 Protein of unknown function (DUF1421) 0.71 0.31 -0.32
18 AT5G08560 transducin family protein / WD-40 repeat family protein 0.7 0.31 -0.31
19 AT1G77600 ARM repeat superfamily protein 0.7 0.31 -0.32
20 AT1G17440 Transcription initiation factor TFIID subunit A CYTOKININ-HYPERSENSITIVE 1,
ENHANCED ETHYLENE RESPONSE 4,
TBP-ASSOCIATED FACTOR 12B		 0.7 0.32 -0.3
21 AT5G49930 zinc knuckle (CCHC-type) family protein embryo defective 1441 0.7 0.31 -0.32
22 AT1G20693 high mobility group B2 HIGH MOBILITY GROUP BETA 1, high
mobility group B2,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP D 02,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP D 2		 0.69 0.3 -0.3
23 AT3G09850 D111/G-patch domain-containing protein 0.69 0.33 -0.33
24 AT1G01040 dicer-like 1 ABNORMAL SUSPENSOR 1, DICER-LIKE
1, CARPEL FACTORY, dicer-like 1,
EMBRYO DEFECTIVE 60, EMBRYO
DEFECTIVE 76, SHORT INTEGUMENTS 1,
SUSPENSOR 1		 0.69 0.31 -0.32
25 AT3G16800 Protein phosphatase 2C family protein 0.68 0.32 -0.33
26 AT1G21630 Calcium-binding EF hand family protein 0.68 0.3 -0.3
27 AT2G27170 Structural maintenance of chromosomes (SMC) family protein STRUCTURAL MAINTENANCE OF
CHROMOSOMES 3, TITAN7		 0.68 0.31 -0.32
28 AT4G30830 Protein of unknown function, DUF593 0.68 0.3 -0.35
29 AT1G22770 gigantea protein (GI) FB, GIGANTEA 0.68 0.3 -0.32
30 AT1G43620 UDP-Glycosyltransferase superfamily protein TRANSPARENT TESTA 15, UGT80B1 0.68 0.32 -0.31
31 AT1G76580 Squamosa promoter-binding protein-like (SBP domain)
transcription factor family protein		 0.68 0.32 -0.31
32 AT5G23890 LOCATED IN: mitochondrion, chloroplast thylakoid membrane,
chloroplast, plastid, chloroplast envelope; EXPRESSED IN:
24 plant structures; EXPRESSED DURING: 14 growth stages;
CONTAINS InterPro DOMAIN/s: S-layer homology domain
(InterPro:IPR001119); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G52410.2); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.68 0.32 -0.31
33 AT5G14120 Major facilitator superfamily protein -0.67 0.3 -0.33
34 AT5G16820 heat shock factor 3 ARABIDOPSIS HEAT SHOCK FACTOR 3,
ARABIDOPSIS THALIANA CLASS A HEAT
SHOCK FACTOR 1B, heat shock factor
3, CLASS A HEAT SHOCK FACTOR 1B		 0.67 0.32 -0.3
35 AT3G06410 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.67 0.31 -0.31
36 AT3G16650 Transducin/WD40 repeat-like superfamily protein -0.66 0.3 -0.32
37 AT5G38840 SMAD/FHA domain-containing protein 0.66 0.3 -0.31
38 AT3G29075 glycine-rich protein 0.66 0.31 -0.32
39 AT4G37760 squalene epoxidase 3 squalene epoxidase 3 0.66 0.32 -0.33
40 AT5G61810 Mitochondrial substrate carrier family protein ATP/phosphate carrier 1 0.66 0.3 -0.3
41 AT3G02885 GAST1 protein homolog 5 GAST1 protein homolog 5 -0.66 0.34 -0.3
42 AT4G24480 Protein kinase superfamily protein 0.66 0.3 -0.32
43 AT1G45000 AAA-type ATPase family protein 0.66 0.33 -0.31
44 AT1G01650 SIGNAL PEPTIDE PEPTIDASE-LIKE 4 ARABIDOPSIS THALIANA SIGNAL
PEPTIDE PEPTIDASE-LIKE 4, SIGNAL
PEPTIDE PEPTIDASE-LIKE 4		 0.65 0.32 -0.31
45 AT1G03850 Glutaredoxin family protein glutaredoxin 13, glutaredoxin 13 -0.65 0.33 -0.31
46 AT5G64170 dentin sialophosphoprotein-related 0.65 0.31 -0.33
47 AT5G15910 NAD(P)-binding Rossmann-fold superfamily protein 0.65 0.29 -0.3
48 AT4G00450 RNA polymerase II transcription mediators CENTER CITY, CRYPTIC PRECOCIOUS 0.65 0.32 -0.31
49 AT4G29940 pathogenesis related homeodomain protein A pathogenesis related homeodomain
protein A		 0.65 0.32 -0.3
50 AT1G21660 Chaperone DnaJ-domain superfamily protein 0.65 0.32 -0.29
51 AT3G52480 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 10 plant structures;
EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis,
petal differentiation and expansion stage; Has 28 Blast
hits to 28 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.64 0.32 -0.32
52 AT3G62930 Thioredoxin superfamily protein -0.64 0.3 -0.33
53 AT1G10090 Early-responsive to dehydration stress protein (ERD4) 0.64 0.3 -0.33
54 AT1G02330 CONTAINS InterPro DOMAIN/s: Hepatocellular
carcinoma-associated antigen 59 (InterPro:IPR010756); Has
1239 Blast hits to 998 proteins in 204 species: Archae - 4;
Bacteria - 71; Metazoa - 421; Fungi - 109; Plants - 87;
Viruses - 5; Other Eukaryotes - 542 (source: NCBI BLink).		 0.64 0.29 -0.33
55 AT3G01310 Phosphoglycerate mutase-like family protein 0.64 0.3 -0.31
56 AT5G01260 Carbohydrate-binding-like fold 0.64 0.33 -0.3
57 AT2G44200 CBF1-interacting co-repressor CIR, N-terminal;Pre-mRNA
splicing factor		 0.64 0.31 -0.3
58 AT1G72200 RING/U-box superfamily protein -0.64 0.32 -0.33
59 AT2G12550 ubiquitin-associated (UBA)/TS-N domain-containing protein homolog of human NUB1 0.63 0.33 -0.31
60 AT3G07740 homolog of yeast ADA2 2A homolog of yeast ADA2 2A, ATADA2A,
HAC10, HXA02, HXA2		 0.63 0.31 -0.32
61 AT5G50380 exocyst subunit exo70 family protein F1 exocyst subunit exo70 family
protein F1, exocyst subunit exo70
family protein F1		 0.63 0.31 -0.31
62 AT1G16570 UDP-Glycosyltransferase superfamily protein -0.63 0.33 -0.32
63 AT5G17350 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 15 plant
structures; EXPRESSED DURING: 8 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G03280.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.63 0.33 -0.34
64 AT2G33730 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.63 0.31 -0.3
65 AT2G40930 ubiquitin-specific protease 5 ATUBP5, PIGMENT DEFECTIVE EMBRYO
323, ubiquitin-specific protease 5		 0.63 0.3 -0.32
66 AT2G20480 unknown protein; Has 19 Blast hits to 19 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.63 0.32 -0.33
67 AT5G59990 CCT motif family protein -0.63 0.3 -0.29
68 AT1G20920 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.63 0.3 -0.32
69 AT5G39850 Ribosomal protein S4 -0.63 0.34 -0.29
70 AT1G59510 Carbohydrate-binding protein CF9 0.62 0.33 -0.31
71 AT3G50070 CYCLIN D3;3 CYCLIN D3;3 -0.62 0.31 -0.32
72 AT2G46240 BCL-2-associated athanogene 6 ARABIDOPSIS THALIANA
BCL-2-ASSOCIATED ATHANOGENE 6,
BCL-2-associated athanogene 6		 0.62 0.34 -0.32
73 AT1G10090 Early-responsive to dehydration stress protein (ERD4) 0.62 0.3 -0.32
74 AT1G22810 Integrase-type DNA-binding superfamily protein -0.62 0.32 -0.33
75 AT5G55040 DNA-binding bromodomain-containing protein 0.62 0.31 -0.31
76 AT2G26000 zinc finger (C3HC4-type RING finger) family protein BRAP2 RING ZnF UBP
domain-containing protein 2		 0.62 0.29 -0.3
77 AT4G19420 Pectinacetylesterase family protein -0.62 0.31 -0.29
78 AT1G34770 CONTAINS InterPro DOMAIN/s: MAGE protein
(InterPro:IPR002190); Has 1274 Blast hits to 1260 proteins
in 85 species: Archae - 0; Bacteria - 0; Metazoa - 1104;
Fungi - 45; Plants - 49; Viruses - 0; Other Eukaryotes - 76
(source: NCBI BLink).		 -0.62 0.31 -0.33
79 AT1G53400 Ubiquitin domain-containing protein 0.62 0.32 -0.31
80 AT2G16740 ubiquitin-conjugating enzyme 29 ubiquitin-conjugating enzyme 29 0.62 0.33 -0.32
81 AT4G39570 Galactose oxidase/kelch repeat superfamily protein -0.61 0.31 -0.33
82 AT5G40850 urophorphyrin methylase 1 urophorphyrin methylase 1 -0.61 0.3 -0.33
83 AT2G30280 RNA-directed DNA methylation 4 DEFECTIVE IN MERISTEM SILENCING 4,
RNA-directed DNA methylation 4		 -0.61 0.32 -0.3
84 AT4G37610 BTB and TAZ domain protein 5 BTB and TAZ domain protein 5 -0.6 0.31 -0.31
85 AT5G56870 beta-galactosidase 4 beta-galactosidase 4 -0.59 0.3 -0.31
86 AT3G62860 alpha/beta-Hydrolases superfamily protein -0.59 0.32 -0.31
87 AT1G65420 Protein of unknown function (DUF565) NONPHOTOCHEMICAL QUENCHING 7 -0.59 0.31 -0.32
88 AT1G67480 Galactose oxidase/kelch repeat superfamily protein -0.59 0.33 -0.33
89 AT3G46530 NB-ARC domain-containing disease resistance protein RECOGNITION OF PERONOSPORA
PARASITICA 13		 -0.59 0.32 -0.33
90 AT5G51580 unknown protein; Has 8 Blast hits to 6 proteins in 4
species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 1 (source: NCBI
BLink).		 -0.58 0.31 -0.31
91 AT5G47830 unknown protein; Has 35333 Blast hits to 34131 proteins in
2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink).		 -0.58 0.32 -0.32
92 AT1G49810 Na+/H+ antiporter 2 Na+/H+ antiporter 2, Na+/H+
antiporter 2, SODIUM:HYDROGEN
ANTIPORTER 2		 -0.57 0.33 -0.3
93 AT3G06080 Plant protein of unknown function (DUF828) TRICHOME BIREFRINGENCE-LIKE 10 -0.57 0.3 -0.33
94 AT5G60590 DHBP synthase RibB-like alpha/beta domain -0.57 0.33 -0.32
95 AT5G51190 Integrase-type DNA-binding superfamily protein -0.57 0.31 -0.31
96 AT3G47570 Leucine-rich repeat protein kinase family protein -0.57 0.33 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
97 C0257 Tryptophan L-Tryptophan L-Tryptophan glucosinolate biosynthesis from tryptophan,
IAA biosynthesis I,
tryptophan biosynthesis,
camalexin biosynthesis,
tRNA charging 		0.73 0.3 -0.33 C0257