AT2G24420 : -
Query Information
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AGICode AT2G24420
Description DNA repair ATPase-related
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G24420 DNA repair ATPase-related 1 0.31 -0.31
2 AT3G14840 Leucine-rich repeat transmembrane protein kinase -0.82 0.32 -0.31
3 AT3G28007 Nodulin MtN3 family protein AtSWEET4, SWEET4 0.82 0.32 -0.33
4 AT2G40460 Major facilitator superfamily protein 0.81 0.31 -0.32
5 AT4G11570 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 0.81 0.29 -0.33
6 AT2G22240 myo-inositol-1-phosphate synthase 2 INOSITOL 3-PHOSPHATE SYNTHASE 2,
MYO-INOSITOL-1-PHOSTPATE SYNTHASE
2, myo-inositol-1-phosphate
synthase 2		 0.8 0.34 -0.31
7 AT4G32770 tocopherol cyclase, chloroplast / vitamin E deficient 1
(VTE1) / sucrose export defective 1 (SXD1)		 SUCROSE EXPORT DEFECTIVE 1,
VITAMIN E DEFICIENT 1		 0.8 0.33 -0.3
8 AT5G64100 Peroxidase superfamily protein -0.8 0.31 -0.29
9 AT2G44380 Cysteine/Histidine-rich C1 domain family protein -0.79 0.32 -0.3
10 AT3G51895 sulfate transporter 3;1 AST12, sulfate transporter 3;1 0.79 0.33 -0.28
11 AT3G16770 ethylene-responsive element binding protein ethylene-responsive element
binding protein,
ethylene-responsive element
binding protein, ETHYLENE RESPONSE
FACTOR 72, RELATED TO AP2 3		 -0.77 0.32 -0.29
12 AT5G62130 Per1-like family protein 0.77 0.32 -0.33
13 AT1G64970 gamma-tocopherol methyltransferase gamma-tocopherol
methyltransferase, TMT1, VITAMIN E
DEFICIENT 4		 0.77 0.32 -0.29
14 AT5G18640 alpha/beta-Hydrolases superfamily protein 0.76 0.31 -0.32
15 AT3G22750 Protein kinase superfamily protein -0.76 0.29 -0.33
16 AT5G65890 ACT domain repeat 1 ACT domain repeat 1 0.76 0.31 -0.3
17 AT1G29390 cold regulated 314 thylakoid membrane 2 cold regulated 314 thylakoid
membrane 2, COLD REGULATED 314
INNER MEMBRANE 2		 0.76 0.34 -0.3
18 AT4G01720 WRKY family transcription factor AtWRKY47, WRKY47 -0.76 0.32 -0.31
19 AT3G53960 Major facilitator superfamily protein 0.76 0.33 -0.32
20 AT1G12010 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.76 0.32 -0.31
21 AT4G00710 BR-signaling kinase 3 BR-signaling kinase 3 -0.75 0.3 -0.36
22 AT1G59940 response regulator 3 response regulator 3 -0.75 0.32 -0.33
23 AT1G24280 glucose-6-phosphate dehydrogenase 3 glucose-6-phosphate dehydrogenase
3		 -0.75 0.31 -0.32
24 AT5G01820 serine/threonine protein kinase 1 ATCIPK14, serine/threonine protein
kinase 1, CBL-INTERACTING PROTEIN
KINASE 14, SOS2-like protein
kinase 24, SNF1-RELATED PROTEIN
KINASE 3.15, serine/threonine
protein kinase 1		 0.75 0.29 -0.32
25 AT1G29395 COLD REGULATED 314 INNER MEMBRANE 1 COLD REGULATED 314 THYLAKOID
MEMBRANE 1, COLD REGULATED 314
INNER MEMBRANE 1, cold regulated
414 thylakoid membrane 1		 0.75 0.32 -0.31
26 AT1G57560 myb domain protein 50 myb domain protein 50, myb domain
protein 50		 -0.75 0.31 -0.33
27 AT5G67180 target of early activation tagged (EAT) 3 target of early activation tagged
(EAT) 3		 0.74 0.29 -0.33
28 AT4G33040 Thioredoxin superfamily protein 0.74 0.33 -0.3
29 AT3G04870 zeta-carotene desaturase PIGMENT DEFECTIVE EMBRYO 181,
SPONTANEOUS CELL DEATH 1,
zeta-carotene desaturase		 0.74 0.31 -0.32
30 AT4G25110 metacaspase 2 metacaspase 2, metacaspase 1c,
metacaspase 2, metacaspase 1c		 -0.74 0.32 -0.33
31 AT4G18800 RAB GTPase homolog A1D ATHSGBP, ATRAB11B, RAB GTPase
homolog A1D, RAB GTPase homolog
A1D		 -0.73 0.3 -0.33
32 AT1G68600 Aluminium activated malate transporter family protein 0.73 0.33 -0.3
33 AT3G03870 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G18130.1); Has 41 Blast hits
to 41 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 2; Fungi - 0; Plants - 39; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.73 0.32 -0.31
34 AT1G48960 Adenine nucleotide alpha hydrolases-like superfamily
protein		 -0.73 0.3 -0.32
35 AT4G36670 Major facilitator superfamily protein AtPLT6, AtPMT6, polyol transporter
6, polyol/monosaccharide
transporter 6		 -0.73 0.31 -0.31
36 AT2G37570 HSP20-like chaperones superfamily protein sodium- and lithium-tolerant 1 0.73 0.3 -0.32
37 AT1G13300 myb-like transcription factor family protein HYPERSENSITIVITY TO LOW
PI-ELICITED PRIMARY ROOT
SHORTENING 1		 -0.73 0.32 -0.33
38 AT3G49940 LOB domain-containing protein 38 LOB domain-containing protein 38 -0.73 0.31 -0.33
39 AT2G39450 Cation efflux family protein ATMTP11, MTP11 0.73 0.31 -0.32
40 AT3G54820 plasma membrane intrinsic protein 2;5 plasma membrane intrinsic protein
2;5, PLASMA MEMBRANE INTRINSIC
PROTEIN 2D		 0.72 0.3 -0.31
41 AT4G05400 copper ion binding -0.72 0.34 -0.33
42 AT1G17560 Ribosomal protein L14p/L23e family protein HUELLENLOS -0.72 0.32 -0.32
43 AT5G49870 Mannose-binding lectin superfamily protein -0.72 0.32 -0.3
44 AT2G36690 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.72 0.3 -0.3
45 AT4G31460 Ribosomal L28 family -0.72 0.31 -0.33
46 AT4G34750 SAUR-like auxin-responsive protein family -0.71 0.32 -0.31
47 AT5G52660 Homeodomain-like superfamily protein 0.71 0.3 -0.32
48 AT1G52050 Mannose-binding lectin superfamily protein -0.71 0.31 -0.32
49 AT2G44370 Cysteine/Histidine-rich C1 domain family protein -0.71 0.33 -0.33
50 AT5G48370 Thioesterase/thiol ester dehydrase-isomerase superfamily
protein		 0.71 0.31 -0.3
51 AT2G32090 Lactoylglutathione lyase / glyoxalase I family protein 0.71 0.31 -0.32
52 AT1G64370 unknown protein; Has 773 Blast hits to 375 proteins in 118
species: Archae - 0; Bacteria - 97; Metazoa - 421; Fungi -
108; Plants - 31; Viruses - 0; Other Eukaryotes - 116
(source: NCBI BLink).		 0.71 0.3 -0.31
53 AT4G12390 pectin methylesterase inhibitor 1 pectin methylesterase inhibitor 1 -0.7 0.3 -0.31
54 AT1G33270 Acyl transferase/acyl hydrolase/lysophospholipase
superfamily protein		 0.7 0.31 -0.3
55 AT2G01900 DNAse I-like superfamily protein -0.7 0.32 -0.32
56 AT5G64000 Inositol monophosphatase family protein ATSAL2, SAL2 -0.7 0.33 -0.33
57 AT1G74560 NAP1-related protein 1 NAP1-related protein 1 -0.7 0.31 -0.32
58 AT5G60140 AP2/B3-like transcriptional factor family protein -0.7 0.29 -0.33
59 AT3G13040 myb-like HTH transcriptional regulator family protein 0.7 0.3 -0.29
60 AT5G45480 Protein of unknown function (DUF594) -0.7 0.3 -0.33
61 AT2G42850 cytochrome P450, family 718 cytochrome P450, family 718 -0.7 0.34 -0.33
62 AT1G11540 Sulfite exporter TauE/SafE family protein -0.7 0.33 -0.31
63 AT1G24530 Transducin/WD40 repeat-like superfamily protein -0.7 0.29 -0.31
64 AT4G27840 SNARE-like superfamily protein 0.7 0.32 -0.33
65 AT3G13590 Cysteine/Histidine-rich C1 domain family protein 0.7 0.3 -0.31
66 AT1G49970 CLP protease proteolytic subunit 1 CLP protease proteolytic subunit
1, NUCLEAR CLPP 5, SUPPRESSOR OF
VARIEGATION 2		 0.7 0.3 -0.32
67 AT5G49710 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G24590.1); Has 35333 Blast
hits to 34131 proteins in 2444 species: Archae - 798;
Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531;
Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).		 0.69 0.31 -0.3
68 AT5G40170 receptor like protein 54 receptor like protein 54, receptor
like protein 54		 0.69 0.31 -0.33
69 AT2G34300 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.69 0.31 -0.31
70 AT1G04830 Ypt/Rab-GAP domain of gyp1p superfamily protein 0.69 0.33 -0.32
71 AT5G05420 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 -0.69 0.32 -0.32
72 AT3G61970 AP2/B3-like transcriptional factor family protein NGATHA2 0.69 0.32 -0.33
73 AT2G27140 HSP20-like chaperones superfamily protein 0.69 0.32 -0.35
74 AT5G62000 auxin response factor 2 ARF1-BINDING PROTEIN, auxin
response factor 2, HLS1
SUPPRESSOR, ORESARA 14		 0.69 0.3 -0.33
75 AT1G61660 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.69 0.32 -0.31
76 AT3G17800 Protein of unknown function (DUF760) 0.69 0.3 -0.31
77 AT5G43600 ureidoglycolate amidohydrolase ARABIDOPSIS THALIANA ALLANTOATE
AMIDOHYDROLASE 2, ureidoglycolate
amidohydrolase		 0.69 0.28 -0.32
78 AT1G51790 Leucine-rich repeat protein kinase family protein -0.69 0.29 -0.3
79 AT2G43050 Plant invertase/pectin methylesterase inhibitor superfamily ATPMEPCRD -0.68 0.31 -0.33
80 AT5G13640 phospholipid:diacylglycerol acyltransferase ARABIDOPSIS THALIANA
PHOSPHOLIPID:DIACYLGLYCEROL
ACYLTRANSFERASE,
phospholipid:diacylglycerol
acyltransferase,
PHOSPHOLIPID:DIACYLGLYCEROL
ACYLTRANSFERASE 1		 0.68 0.32 -0.34
81 AT4G38350 Patched family protein 0.68 0.31 -0.33
82 AT2G43500 Plant regulator RWP-RK family protein 0.68 0.31 -0.31
83 AT4G36830 GNS1/SUR4 membrane protein family HOS3-1 0.68 0.31 -0.3
84 AT4G15700 Thioredoxin superfamily protein -0.68 0.3 -0.31
85 AT5G62000 auxin response factor 2 ARF1-BINDING PROTEIN, auxin
response factor 2, HLS1
SUPPRESSOR, ORESARA 14		 0.68 0.33 -0.32
86 AT2G23130 arabinogalactan protein 17 arabinogalactan protein 17,
ATAGP17		 -0.68 0.3 -0.32
87 AT3G63110 isopentenyltransferase 3 isopentenyltransferase 3,
isopentenyltransferase 3		 -0.68 0.3 -0.31
88 AT3G60550 cyclin p3;2 cyclin p3;2 -0.68 0.3 -0.32
89 AT4G02220 zinc finger (MYND type) family protein / programmed cell
death 2 C-terminal domain-containing protein		 -0.67 0.31 -0.32
90 AT1G36060 Integrase-type DNA-binding superfamily protein -0.67 0.32 -0.33
91 AT4G18430 RAB GTPase homolog A1E RAB GTPase homolog A1E, RAB GTPase
homolog A1E		 -0.67 0.34 -0.35
92 AT5G27920 F-box family protein -0.67 0.32 -0.32
93 AT1G80460 Actin-like ATPase superfamily protein GLI1, nonhost resistance to P. s.
phaseolicola 1		 -0.67 0.32 -0.31
94 AT2G47790 Transducin/WD40 repeat-like superfamily protein -0.67 0.3 -0.33
95 AT1G44830 Integrase-type DNA-binding superfamily protein -0.67 0.33 -0.3
96 AT1G71480 Nuclear transport factor 2 (NTF2) family protein 0.67 0.32 -0.32
97 AT3G14370 Protein kinase superfamily protein WAG2 -0.67 0.32 -0.33
98 AT4G23990 cellulose synthase like G3 ARABIDOPSIS THALIANA CELLULOSE
SYNTHASE-LIKE G3, cellulose
synthase like G3		 0.67 0.31 -0.32
99 AT3G61100 Putative endonuclease or glycosyl hydrolase -0.67 0.31 -0.31
100 AT5G66350 Lateral root primordium (LRP) protein-related SHORT INTERNODES -0.67 0.3 -0.32
101 AT5G03720 heat shock transcription factor A3 ARABIDOPSIS THALIANA HEAT SHOCK
TRANSCRIPTION FACTOR A3, heat
shock transcription factor A3		 -0.67 0.31 -0.33
102 AT3G26230 cytochrome P450, family 71, subfamily B, polypeptide 24 cytochrome P450, family 71,
subfamily B, polypeptide 24		 -0.67 0.31 -0.31
103 AT3G15880 WUS-interacting protein 2 TOPLESS-RELATED 4, WUS-interacting
protein 2		 0.67 0.3 -0.33
104 AT1G66380 myb domain protein 114 myb domain protein 114, myb domain
protein 114		 0.66 0.33 -0.31
105 AT3G14067 Subtilase family protein 0.66 0.3 -0.3
106 AT3G07360 plant U-box 9 ARABIDOPSIS THALIANA PLANT U-BOX
9, plant U-box 9		 0.66 0.3 -0.32
107 AT3G20730 Tetratricopeptide repeat (TPR)-like superfamily protein -0.66 0.32 -0.33
108 AT1G31850 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.66 0.33 -0.33
109 AT3G29410 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 -0.66 0.29 -0.32
110 AT5G65090 DNAse I-like superfamily protein BRISTLED 1, DEFORMED ROOT HAIRS 4,
MRH3		 -0.66 0.34 -0.32
111 AT2G25680 molybdate transporter 1 molybdate transporter 1 -0.66 0.3 -0.33
112 AT1G53720 cyclophilin 59 CYCLOPHILIN 59, cyclophilin 59 -0.66 0.3 -0.33
113 AT4G12480 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 EARLY ARABIDOPSIS ALUMINUM INDUCED
1, pEARLI 1		 -0.66 0.31 -0.32
114 AT2G34260 transducin family protein / WD-40 repeat family protein human WDR55 (WD40 repeat) homolog -0.66 0.33 -0.32
115 AT3G23630 isopentenyltransferase 7 ARABIDOPSIS THALIANA
ISOPENTENYLTRANSFERASE 7,
isopentenyltransferase 7		 -0.66 0.29 -0.31
116 AT5G53980 homeobox protein 52 homeobox protein 52, homeobox
protein 52		 -0.66 0.31 -0.3
117 AT5G43910 pfkB-like carbohydrate kinase family protein -0.65 0.3 -0.31
118 AT3G50560 NAD(P)-binding Rossmann-fold superfamily protein -0.65 0.3 -0.3
119 AT3G54650 RNI-like superfamily protein FBL17 -0.65 0.3 -0.29
120 AT2G19385 zinc ion binding -0.65 0.3 -0.31
121 AT2G37510 RNA-binding (RRM/RBD/RNP motifs) family protein -0.65 0.34 -0.32
122 AT4G12470 azelaic acid induced 1 azelaic acid induced 1 -0.65 0.3 -0.31
123 AT4G26010 Peroxidase superfamily protein -0.65 0.34 -0.32
124 AT3G27620 alternative oxidase 1C alternative oxidase 1C -0.65 0.31 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
125 C0111 Hexa-2-O-glycerol-β-galactopyranoside Hexa-2-O-gllycerol-β-D-galactopyranoside - - 0.78 0.44 -0.43
126 C0092 Fumaric acid - Fumarate citrulline-nitric oxide cycle,
succinate + a ubiquinone -> a ubiquinol + fumarate,
superpathway of glyoxylate cycle and fatty acid degradation,
tyrosine degradation I,
aerobic respiration (alternative oxidase pathway),
inosine-5'-phosphate biosynthesis II,
arginine biosynthesis I,
TCA cycle variation V (plant),
TCA cycle variation III (eukaryotic),
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
purine nucleotides de novo biosynthesis II,
arginine biosynthesis II (acetyl cycle),
urea cycle,
aerobic respiration (cytochrome c) 		0.76 0.3 -0.31 C0092
127 C0225 Raffinose D-(+)-Raffinose Raffinose ajugose biosynthesis II (galactinol-independent),
stachyose biosynthesis,
stachyose degradation 		0.73 0.46 -0.44 C0225
128 C0252 Threonic acid D,L-Threonic acid L-Threonate ascorbic acid degradation 0.72 0.48 -0.48 C0252
129 C0164 MST_1596.8 - - - -0.69 0.46 -0.49
130 C0151 Monogalactosyldiacylgycerol-34:4 - a Monogalactosyldiacylgycerol glycolipid biosynthesis,
triacylglycerol degradation,
linoleate biosynthesis I,
glutathione redox reactions I 		-0.67 0.48 -0.5 C0151
131 C0023 1,6-Anhydro-β-glucose 1,6-Anhydro-β-D-glucose Levoglucosan - -0.67 0.45 -0.46 C0023