AT2G31970 : ATRAD50
Query Information
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AGICode AT2G31970
Description DNA repair-recombination protein (RAD50)
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G31970 DNA repair-recombination protein (RAD50) ATRAD50, RAD50 1 0.32 -0.32
2 AT5G04460 RING/U-box superfamily protein 0.73 0.31 -0.29
3 AT5G58410 HEAT/U-box domain-containing protein 0.69 0.32 -0.28
4 AT3G50370 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 26 plant
structures; EXPRESSED DURING: 15 growth stages; Has 27734
Blast hits to 16708 proteins in 1259 species: Archae - 81;
Bacteria - 3434; Metazoa - 10876; Fungi - 2514; Plants -
987; Viruses - 212; Other Eukaryotes - 9630 (source: NCBI
BLink).		 0.68 0.33 -0.31
5 AT5G47480 RGPR-related 0.67 0.32 -0.34
6 AT1G32600 F-box associated ubiquitination effector family protein -0.67 0.31 -0.32
7 AT4G11560 bromo-adjacent homology (BAH) domain-containing protein 0.66 0.31 -0.32
8 AT2G47660 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.66 0.31 -0.34
9 AT2G28410 unknown protein; Has 18 Blast hits to 18 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.66 0.31 -0.33
10 AT1G62130 AAA-type ATPase family protein 0.65 0.3 -0.29
11 AT5G43870 Plant protein of unknown function (DUF828) with plant
pleckstrin homology-like region		 -0.65 0.32 -0.32
12 AT5G08320 CONTAINS InterPro DOMAIN/s: E2F-associated phosphoprotein,
C-terminal (InterPro:IPR019370); Has 149 Blast hits to 149
proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa -
79; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes -
35 (source: NCBI BLink).		 -0.64 0.32 -0.33
13 AT1G79990 structural molecules 0.64 0.31 -0.29
14 AT2G13430 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.63 0.33 -0.33
15 AT5G26330 Cupredoxin superfamily protein -0.63 0.31 -0.33
16 AT3G29060 EXS (ERD1/XPR1/SYG1) family protein -0.63 0.34 -0.3
17 AT3G42250 transposable element gene -0.63 0.3 -0.34
18 AT3G06160 AP2/B3-like transcriptional factor family protein -0.62 0.3 -0.3
19 AT1G74710 ADC synthase superfamily protein ARABIDOPSIS ISOCHORISMATE SYNTHASE
1, ENHANCED DISEASE SUSCEPTIBILITY
TO ERYSIPHE ORONTII 16,
ISOCHORISMATE SYNTHASE 1,
SALICYLIC ACID INDUCTION DEFICIENT
2		 -0.62 0.31 -0.31
20 AT1G07160 Protein phosphatase 2C family protein 0.62 0.32 -0.34
21 AT1G61130 serine carboxypeptidase-like 32 serine carboxypeptidase-like 32 -0.61 0.35 -0.31
22 AT1G03270 CBS domain-containing protein with a domain of unknown
function (DUF21)		 -0.61 0.32 -0.32
23 AT2G39705 ROTUNDIFOLIA like 8 DEVIL 11, ROTUNDIFOLIA like 8 0.61 0.32 -0.31
24 AT5G45850 Protein of unknown function (DUF688) -0.61 0.3 -0.33
25 AT5G11040 TRS120 AtTRS120, TRS120 0.61 0.3 -0.29
26 AT1G17210 IAP-like protein 1 ARABIDOPSIS IAP-LIKE PROTEIN,
IAP-like protein 1		 0.61 0.31 -0.31
27 AT1G22810 Integrase-type DNA-binding superfamily protein -0.61 0.35 -0.31
28 AT5G01290 mRNA capping enzyme family protein 0.61 0.33 -0.29
29 AT3G62160 HXXXD-type acyl-transferase family protein -0.6 0.31 -0.33
30 AT3G32940 RNA-binding KH domain-containing protein 0.6 0.32 -0.32
31 AT3G53420 plasma membrane intrinsic protein 2A PLASMA MEMBRANE INTRINSIC PROTEIN
2, PLASMA MEMBRANE INTRINSIC
PROTEIN 2;1, plasma membrane
intrinsic protein 2A		 -0.6 0.3 -0.31
32 AT5G04560 HhH-GPD base excision DNA repair family protein DEMETER 0.6 0.31 -0.32
33 AT1G65420 Protein of unknown function (DUF565) NONPHOTOCHEMICAL QUENCHING 7 -0.6 0.3 -0.31
34 AT1G79280 nuclear pore anchor TRANSLOCATED PROMOTER REGION,
nuclear pore anchor		 0.6 0.33 -0.31
35 AT2G47120 NAD(P)-binding Rossmann-fold superfamily protein -0.6 0.32 -0.3
36 AT2G31590 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G04730.1); Has 30 Blast hits
to 30 proteins in 3 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other
Eukaryotes - 1 (source: NCBI BLink).		 -0.6 0.3 -0.32
37 AT2G15740 C2H2-like zinc finger protein -0.6 0.33 -0.28
38 AT1G54420 unknown protein; Has 9 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 6 (source: NCBI
BLink).		 -0.59 0.3 -0.29
39 AT4G29090 Ribonuclease H-like superfamily protein 0.59 0.31 -0.32
40 AT1G52390 unknown protein; Has 7 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.59 0.34 -0.3
41 AT1G78950 Terpenoid cyclases family protein -0.59 0.3 -0.32
42 AT5G34895 transposable element gene -0.58 0.32 -0.33
43 AT5G58040 homolog of yeast FIP1 [V] homolog of yeast FIP1 [V],
ATFIPS5, homolog of yeast FIP1
[V], FIPS5		 0.58 0.31 -0.34
44 AT1G68270 AMP-dependent synthetase and ligase family protein 0.58 0.3 -0.32
45 AT1G15190 Fasciclin-like arabinogalactan family protein -0.58 0.31 -0.32
46 AT1G32840 transposable element gene -0.58 0.33 -0.32
47 AT5G35410 Protein kinase superfamily protein SALT OVERLY SENSITIVE 2,
CBL-INTERACTING PROTEIN KINASE 24,
SNF1-RELATED PROTEIN KINASE 3.11,
SALT OVERLY SENSITIVE 2		 0.57 0.3 -0.32
48 AT1G49810 Na+/H+ antiporter 2 Na+/H+ antiporter 2, Na+/H+
antiporter 2, SODIUM:HYDROGEN
ANTIPORTER 2		 -0.57 0.32 -0.32
49 AT3G29180 Protein of unknown function (DUF1336) 0.57 0.32 -0.29
50 AT2G28760 UDP-XYL synthase 6 UDP-XYL synthase 6 -0.57 0.31 -0.31
51 AT5G47090 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF2052, coiled-coil (InterPro:IPR018613);
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink).		 0.57 0.32 -0.29
52 AT3G42310 unknown protein; Has 66 Blast hits to 66 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 12; Fungi - 0;
Plants - 18; Viruses - 31; Other Eukaryotes - 5 (source:
NCBI BLink).		 0.57 0.31 -0.33
53 AT2G03630 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G74220.1); Has 126 Blast hits
to 126 proteins in 28 species: Archae - 0; Bacteria - 6;
Metazoa - 7; Fungi - 5; Plants - 87; Viruses - 0; Other
Eukaryotes - 21 (source: NCBI BLink).		 -0.57 0.29 -0.32
54 AT4G23330 BEST Arabidopsis thaliana protein match is: eukaryotic
translation initiation factor 3A (TAIR:AT4G11420.1); Has 63
Blast hits to 55 proteins in 14 species: Archae - 0;
Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 62; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.57 0.33 -0.29
55 AT4G19600 Cyclin family protein CYCT1;4 0.56 0.31 -0.32
56 AT5G66030 Golgi-localized GRIP domain-containing protein ATGRIP, GRIP 0.56 0.29 -0.3
57 AT5G46620 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G17960.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.56 0.34 -0.32
58 AT1G15920 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.56 0.33 -0.3
59 AT5G66710 Protein kinase superfamily protein 0.56 0.33 -0.32
60 AT4G35725 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: embryo, sepal; EXPRESSED
DURING: 4 anthesis, C globular stage; Has 30201 Blast hits
to 17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 0.56 0.32 -0.34
61 AT5G01400 HEAT repeat-containing protein ENHANCED SILENCING PHENOTYPE 4 0.56 0.33 -0.3
62 AT4G09140 MUTL-homologue 1 ARABIDOPSIS THALIANA
MUTL-HOMOLOGUE 1, MUTL-homologue 1		 0.56 0.3 -0.31
63 AT4G13330 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.56 0.31 -0.32
64 AT2G41370 Ankyrin repeat family protein / BTB/POZ domain-containing
protein		 BLADE ON PETIOLE2 -0.56 0.29 -0.3
65 AT1G17545 Protein phosphatase 2C family protein -0.56 0.32 -0.31
66 AT5G44880 transposable element gene -0.56 0.33 -0.3
67 AT4G03670 transposable element gene -0.55 0.32 -0.31
68 AT3G08890 Protein of unknown function, DUF538 -0.55 0.31 -0.33
69 AT5G60260 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.55 0.32 -0.31
70 AT5G67550 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: flower; EXPRESSED
DURING: 4 anthesis; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G71110.1); Has 161 Blast hits
to 154 proteins in 16 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 161; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.55 0.31 -0.33
71 AT4G13700 purple acid phosphatase 23 ATPAP23, purple acid phosphatase
23		 -0.54 0.32 -0.32
72 AT2G45460 SMAD/FHA domain-containing protein 0.54 0.31 -0.31
73 AT1G71760 unknown protein; Has 92 Blast hits to 92 proteins in 41
species: Archae - 0; Bacteria - 0; Metazoa - 44; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 16 (source:
NCBI BLink).		 -0.54 0.32 -0.32
74 AT4G00890 proline-rich family protein -0.54 0.3 -0.32
75 AT5G14770 Tetratricopeptide repeat (TPR)-like superfamily protein 0.54 0.33 -0.3
76 AT4G34430 DNA-binding family protein SWITCH/SUCROSE NONFERMENTING 3D,
CHB3		 0.54 0.34 -0.33
77 AT2G28240 ATP-dependent helicase family protein 0.54 0.32 -0.33
78 AT1G30455 transcription regulators;translation initiation
factors;zinc ion binding;transcription activators		 -0.54 0.32 -0.31
79 AT3G27800 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.54 0.34 -0.33
80 AT4G27930 unknown protein; Has 4 Blast hits to 4 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.54 0.32 -0.3
81 AT3G54570 Plant calmodulin-binding protein-related -0.54 0.31 -0.31
82 AT4G31000 Calmodulin-binding protein 0.54 0.33 -0.33
83 AT2G04675 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.53 0.3 -0.31
84 AT3G12300 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF667
(InterPro:IPR007714); Has 373 Blast hits to 371 proteins in
116 species: Archae - 0; Bacteria - 0; Metazoa - 213; Fungi
- 4; Plants - 71; Viruses - 0; Other Eukaryotes - 85
(source: NCBI BLink).		 -0.53 0.31 -0.35
85 AT5G28600 transposable element gene -0.53 0.29 -0.31
86 AT5G61340 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G26650.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.53 0.32 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
87 C0252 Threonic acid D,L-Threonic acid L-Threonate ascorbic acid degradation -0.75 0.47 -0.44 C0252
88 C0009 myo-Inositol - myo-Inositol stachyose biosynthesis,
UDP-D-glucuronate biosynthesis (from myo-inositol),
1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza),
D-myo-inositol (1,4,5)-trisphosphate degradation,
galactosylcyclitol biosynthesis,
D-myo-inositol (1,4,5)-trisphosphate biosynthesis,
phytate degradation I,
myo-inositol biosynthesis,
ajugose biosynthesis I (galactinol-dependent),
phospholipid biosynthesis II 		-0.69 0.44 -0.48 C0009